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From: nixo <anothersms@gmail.com>
To: 38546@debbugs.gnu.org
Subject: [bug#38546] [PATCH 0/3] Julia: fix package build and add julia-xyz
Date: Mon, 9 Dec 2019 14:36:25 +0100	[thread overview]
Message-ID: <87v9qpvbyr.fsf@guixSD.i-did-not-set--mail-host-address--so-tickle-me> (raw)


Hello Guix!

Changes:

This set of patches improve the state of julia-build-system.

1. set path JULIA_LOAD_PATH to enable installing packages, and
  JULIA_DEPOT_PATH to allow guix-precompiled cache to be recognized by julia. To
  do this, a small "hack" with libfaketime was required (julia decides if the
  cache is valid by comparing source ".jl" mtime with cache ".ji" file, in which
  julia stores a timestamp. We need to force this timestamp to be equal to the
  mtime of guix-store files).
2. Enable package tests
3. Add a first package (julia-compat) definition. If this is fine, I'll start
   pushing many many more (I have them ready, but I need to update many of them)



 Thanks! :)

One note: with this PATH changes, julia will not be able to find packages
installed by Julia Pkg3.jl anymore. This is expected (it should happen for R,
python, emacs... too) but since we still need to merge the packages, this
patch renders julia pretty unusable. The workaround is for users to add to
JULIA_LOAD_PATH and JULIA_LOAD_PATH local user-writable folders, activate a
profile, and then install packages manually:

#+begin_src bash
   JULIA_LOAD_PATH=/tmp/julia:$JULIA_LOAD_PATH JULIA_DEPOT_PATH=/tmp/julia:$JULIA_DEPOT_PATH julia
#+end_src

nixo (3):
 gnu: julia: Set to JULIA_LOAD_PATH and JULIA_DEPOT_PATH variables.
 gnu: julia-build-system: Enable tests.
 gnu: julia-xyz: Add julia-compat.

#+begin_src julia
   using Pkg
   Pkg.activate("/tmp/julia")
   Pkg.add("PACKAGE_NAME")
#+end_src

-- 
2.24.0

gnu/packages/julia-xyz.scm        |  62 +++++++++++++
gnu/packages/julia.scm            | 146 +++++++++++++++---------------
guix/build-system/julia.scm       |   4 +-
guix/build/julia-build-system.scm |  28 ++++--
4 files changed, 159 insertions(+), 81 deletions(-)
create mode 100644 gnu/packages/julia-xyz.scm

             reply	other threads:[~2019-12-09 13:58 UTC|newest]

Thread overview: 54+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
     [not found] <87pnfgvqgt.fsf@guixSD.i-did-not-set--mail-host-address--so-tickle-me>
2019-12-09 13:36 ` nixo [this message]
2019-10-10 15:49   ` [bug#38546] [PATCH 1/3] gnu: julia: Set to JULIA_LOAD_PATH and JULIA_DEPOT_PATH variables Nicolò Balzarotti
2019-12-15 21:43     ` Ludovic Courtès
2019-10-10 15:49   ` [bug#38546] [PATCH 3/3] gnu: julia-xyz: Add julia-compat Nicolò Balzarotti
2019-12-15 21:46     ` Ludovic Courtès
2019-10-10 15:49   ` [bug#38546] [PATCH 2/3] gnu: julia-build-system: Enable tests Nicolò Balzarotti
2019-12-15 21:45     ` Ludovic Courtès
2019-12-12  8:43   ` [bug#38546] [PATCH 01/11] gnu: julia: Update to 1.3.1 nixo
2019-12-15 21:40   ` [bug#38546] [PATCH 0/3] Julia: fix package build and add julia-xyz Ludovic Courtès
2020-01-10  9:25   ` [bug#38546] [PATCH 03/11] gnu: julia: Adjust indentation nixo
2020-01-17 18:40   ` [bug#38546] [PATCH 05/11] gnu: build: julia-build-system: fix package nixo
2020-01-18 12:58   ` [bug#38546] [PATCH 02/11] gnu: julia: use SOURCE_DATE_EPOCH for precompilation timestamp nixo
2020-01-18 13:05   ` [bug#38546] [PATCH 06/11] gnu: Add julia-compat nixo
2020-01-18 13:06   ` [bug#38546] [PATCH 07/11] gnu: Add julia-inifile nixo
2020-01-18 13:07   ` [bug#38546] [PATCH 08/11] gnu: Add julia-sha nixo
2020-01-18 13:07   ` [bug#38546] [PATCH 09/11] gnu: Add julia-binaryprovider nixo
2020-01-18 13:11   ` [bug#38546] [PATCH 10/11] gnu: Add julia-mbedtls nixo
2020-01-18 13:11   ` [bug#38546] [PATCH 11/11] gnu: Add julia-http nixo
2020-01-18 13:23   ` [bug#38546] [PATCH 04/11] use wrapper to set JULIA_LOAD_PATH and JULIA_DEPOT_PATH nixo
2020-01-18 13:32   ` [bug#38546] [Nicolò Balzarotti] [PATCH 00/11] Update julia to 1.3.1, fix precompilation, add HTTP.jl Nicolò Balzarotti
2020-01-18 13:36   ` [bug#38546] [nixo] [PATCH 01/11] gnu: julia: Update to 1.3.1 Nicolò Balzarotti
2020-01-18 13:42   ` [bug#38546] [Nicolò Balzarotti] [PATCH 00/10] Update julia to 1.3.1, fix precompilation, add HTTP.jl Nicolò Balzarotti
2020-01-18 13:59   ` [bug#38546] [00/11] Update Julia, Fix " Nicolò Balzarotti
2020-01-20 18:49     ` zimoun
2020-01-21 13:45       ` Nicolò Balzarotti
2020-01-22  9:22         ` zimoun
2020-01-22  9:59           ` Nicolò Balzarotti
2020-01-24 17:26             ` zimoun
2020-02-04 18:03               ` zimoun
2020-02-07 12:06                 ` zimoun
2020-02-11 14:51                 ` zimoun
2020-02-11 15:10                   ` Nicolò Balzarotti
2020-02-11 15:19                     ` zimoun
2020-02-11 15:24                       ` Nicolò Balzarotti
2020-01-18 14:35   ` [bug#38546] Julia patches v3 Nicolò Balzarotti
2020-02-11 17:58   ` [bug#38546] [PATCH v4] Update Julia 1.3.1: almost done zimoun
2020-02-24 12:50     ` zimoun
2020-02-24 20:59       ` Nicolò Balzarotti
2020-02-25 16:12         ` zimoun
2020-02-25 18:08           ` Nicolò Balzarotti
2020-02-26 12:32             ` [bug#38546] [PATCH v5] Julia: Update to 1.3.1 Nicolò Balzarotti
2020-03-16 10:06               ` Efraim Flashner
2020-03-17  7:51                 ` Nicolò Balzarotti
2020-03-17  8:12                   ` Efraim Flashner
2020-03-17 12:21                     ` Marius Bakke
2020-03-17 13:37                       ` Nicolò Balzarotti
2020-03-19 12:28                         ` Marius Bakke
2020-04-06  6:09                           ` Efraim Flashner
2020-04-06  8:18                             ` Nicolò Balzarotti
2020-04-06  8:37                               ` Efraim Flashner
2020-04-06 23:18                                 ` Nicolò Balzarotti
2020-04-07  5:41                                   ` Efraim Flashner
2020-04-07  6:05                                     ` Efraim Flashner
2020-04-07 14:35                                   ` bug#38546: " Efraim Flashner

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