From: "Nicolò Balzarotti" <anothersms@gmail.com>
To: zimoun <zimon.toutoune@gmail.com>, 38546@debbugs.gnu.org
Subject: [bug#38546] [PATCH v4] Update Julia 1.3.1: almost done
Date: Mon, 24 Feb 2020 21:59:46 +0100 [thread overview]
Message-ID: <87imjvwvjx.fsf@guixSD.i-did-not-set--mail-host-address--so-tickle-me> (raw)
In-Reply-To: <CAJ3okZ3oNSa0zkkSxUJ75rX5UKGByYTf9zR4zn5Cd6W6=9qJpQ@mail.gmail.com>
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zimoun <zimon.toutoune@gmail.com> writes:
> Hi,
>
Hi,
> Friendly ping. :-)
>
Here's a friendly 1.3.1 + HTTP.jl + dependencies patch submission.
Hopefully this time it's fine. Package precompilation should be working
now (except json, whose cache, for some reason, is not valid and gets
rebuilt).
As a reminder: determinism is still not addressed and will be fixed in
the 1.4.0 release (hopefully, upstream is still not that responsive).
However, there are dozens of julia packages that I want to package, so
if this first batch is finally fine, more will come.
[-- Attachment #2: 0001-gnu-Add-dsfmt.patch --]
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From aa02b06ade12613f81ddc0415fb0eecffb808352 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:06:28 +0100
Subject: [PATCH 01/16] gnu: Add dsfmt.
* gnu/packages/maths.scm (dsfmt): New variable.
---
gnu/packages/maths.scm | 72 ++++++++++++++++++++++++++++++++++++++++++
1 file changed, 72 insertions(+)
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 10071c10d5..1c55334a7d 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -33,6 +33,7 @@
;;; Copyright © 2019 Nicolas Goaziou <mail@nicolasgoaziou.fr>
;;; Copyright © 2019 Steve Sprang <scs@stevesprang.com>
;;; Copyright © 2019 Robert Smith <robertsmith@posteo.net>
+;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -373,6 +374,77 @@ semiconductors.")
(license license:gpl3+)
(home-page "https://www.gnu.org/software/dionysus/")))
+(define-public dsfmt
+ (package
+ (name "dsfmt")
+ (version "2.2.3")
+ (source
+ (origin
+ (method url-fetch)
+ (uri
+ (string-append
+ "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/dSFMT-src-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "03kaqbjbi6viz0n33dk5jlf6ayxqlsq4804n7kwkndiga9s4hd42"))
+ ;; julia needs those (and is the only program depending on dsfmt now)
+ (patches
+ (list
+ (origin
+ (method url-fetch)
+ (uri (string-append
+ "https://raw.githubusercontent.com/JuliaLang/julia/"
+ "v1.3.0/deps/patches/dSFMT.c.patch"))
+ (sha256 (base32
+ "09mhv11bms8jsmkmdqvlcgljwhzw3b6n9nncpi2b6dla9798hw2y"))
+ (file-name "dSFMT.c.patch"))
+ (origin
+ (method url-fetch)
+ (uri (string-append
+ "https://raw.githubusercontent.com/JuliaLang/julia/"
+ "v1.3.0/deps/patches/dSFMT.h.patch"))
+ (sha256 (base32
+ "1py5rd0yxic335lzka23f6x2dhncrpizpyrk57gi2f28c0p98y5n"))
+ (file-name "dSFMT.h.patch"))))))
+ (build-system gnu-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (delete 'configure) ;no configure script
+ (replace 'build
+ ;; upstream Makefile does not build a shared library
+ (lambda _
+ (invoke
+ "gcc"
+ ;; flags copied from julia
+ ;; https://github.com/JuliaLang/julia/blob/v1.3.0/deps/dsfmt.mk
+ "-DNDEBUG" "-DDSFMT_MEXP=19937"
+ "-fPIC" "-DDSFMT_DO_NOT_USE_OLD_NAMES"
+ "-O3" "-finline-functions" "-fomit-frame-pointer"
+ "-fno-strict-aliasing" "--param" "max-inline-insns-single=1800"
+ "-Wmissing-prototypes" "-Wall" "-std=c99" "-shared" "dSFMT.c"
+ "-o" "libdSFMT.so")))
+ (replace 'install ;no "install" target
+ (lambda* (#:key outputs #:allow-other-keys)
+ (let ((lib (string-append (assoc-ref outputs "out")
+ "/lib"))
+ (inc (string-append (assoc-ref outputs "out")
+ "/include")))
+ (install-file "libdSFMT.so" lib)
+ (install-file "dSFMT.h" inc)
+ #t))))))
+ (synopsis "Double precision SIMD-oriented Fast Mersenne Twister")
+ (description
+ "The dSMFT package speeds up Fast Mersenne Twister generation by avoiding
+the expensive conversion of integer to double (floating point). dSFMT directly
+generates double precision floating point pseudorandom numbers which have the
+IEEE Standard for Binary Floating-Point Arithmetic (ANSI/IEEE Std 754-1985)
+format. dSFMT is only available on the CPUs which use IEEE 754 format double
+precision floating point numbers.")
+ (home-page "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/SFMT/")
+ (license license:bsd-3)))
+
(define-public gsl
(package
(name "gsl")
--
2.25.0
[-- Attachment #3: 0002-gnu-julia-Update-to-1.3.1.patch --]
[-- Type: text/x-patch, Size: 27029 bytes --]
From 2a4e73c2c4700be23092197c48465a605786683d Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:07:27 +0100
Subject: [PATCH 02/16] gnu: julia: Update to 1.3.1.
* gnu/packages/julia.scm (julia): Update to 1.3.1
* gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch: New file.
* gnu/packages/patches/julia-no-project-name-cache.patch: New file.
* gnu/local.mk: Add julia patches.
---
gnu/local.mk | 2 +
gnu/packages/julia.scm | 348 +++++++++---------
.../julia-SOURCE_DATE_EPOCH-mtime.patch | 22 ++
3 files changed, 188 insertions(+), 184 deletions(-)
create mode 100644 gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch
diff --git a/gnu/local.mk b/gnu/local.mk
index 1f7cad9d32..c2273d5745 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -26,6 +26,7 @@
# Copyright © 2019 Evan Straw <evan.straw99@gmail.com>
# Copyright © 2019 Brett Gilio <brettg@gnu.org>
# Copyright © 2019 Amin Bandali <mab@gnu.org>
+# Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
#
# This file is part of GNU Guix.
#
@@ -1038,6 +1039,7 @@ dist_patch_DATA = \
%D%/packages/patches/java-xerces-bootclasspath.patch \
%D%/packages/patches/java-xerces-build_dont_unzip.patch \
%D%/packages/patches/java-xerces-xjavac_taskdef.patch \
+ %D%/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch \
%D%/packages/patches/jbig2dec-ignore-testtest.patch \
%D%/packages/patches/jfsutils-add-sysmacros.patch \
%D%/packages/patches/jfsutils-include-systypes.patch \
diff --git a/gnu/packages/julia.scm b/gnu/packages/julia.scm
index 65a5e42beb..74d214930e 100644
--- a/gnu/packages/julia.scm
+++ b/gnu/packages/julia.scm
@@ -1,6 +1,7 @@
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2016, 2017 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016 Efraim Flashner <efraim@flashner.co.il>
+;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -28,6 +29,7 @@
#:use-module (gnu packages algebra)
#:use-module (gnu packages base)
#:use-module (gnu packages compression)
+ #:use-module (gnu packages curl)
#:use-module (gnu packages elf)
#:use-module (gnu packages gcc)
#:use-module (gnu packages llvm)
@@ -43,18 +45,18 @@
#:use-module (gnu packages textutils)
#:use-module (gnu packages tls)
#:use-module (gnu packages version-control)
+ #:use-module (gnu packages ssh)
#:use-module (gnu packages wget)
#:use-module (ice-9 match))
(define libuv-julia
- (let ((commit "26dbe5672c33fc885462c509fe2a9b36f35866fd")
- (revision "6"))
- ;; When upgrading Julia, also upgrade this.
- ;; Get the commit from https://github.com/JuliaLang/julia/blob/v1.1.1/deps/libuv.version
+ (let ((commit "35b1504507a7a4168caae3d78db54d1121b121e1"))
+ ;; When upgrading Julia, also upgrade this. Get the commit from
+ ;; https://github.com/JuliaLang/julia/blob/v1.3.1/deps/libuv.version
(package
(inherit libuv)
(name "libuv-julia")
- (version (string-append "1.9.0-" revision "." (string-take commit 8)))
+ (version (string-append "2.0.0" "." (string-take commit 8)))
(source (origin
(method git-fetch)
(uri (git-reference
@@ -63,7 +65,7 @@
(file-name (string-append name "-" version "-checkout"))
(sha256
(base32
- "17pn2xmqaramilx897s9grs966i5246gi6sric5alch4g9j4685n"))))
+ "0dn3v6fdp1z382pqg3nhjzk60l61ky9b65mfgaj29fv2da95rwjs"))))
(build-system gnu-build-system)
(arguments
(substitute-keyword-arguments (package-arguments libuv)
@@ -72,14 +74,37 @@
(delete 'autogen)))))
(home-page "https://github.com/JuliaLang/libuv"))))
-(define (llvm-patch-url version name)
+(define libunwind-julia
+ ;; The Julia projects requires their patched version.
+ ;; Get from https://github.com/JuliaLang/julia/tree/master/deps/patches
+ (package
+ (inherit libunwind)
+ (name "libunwind-julia")
+ (version "1.3.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "mirror://savannah/libunwind/libunwind-"
+ version ".tar.gz"))
+ (sha256
+ (base32
+ "1y0l08k6ak1mqbfj6accf9s5686kljwgsl4vcqpxzk5n74wpm6a3"))
+ (patches
+ (list
+ (julia-patch "libunwind-prefer-extbl"
+ "0lr4dafw8qyfh8sw8hhbwkql1dlhqv8px7k81y2l20hhxfgnh2m1")
+ (julia-patch "libunwind-static-arm"
+ "1jk3bmiw61ypcchqkk1fyg5wh8wpggk574wxyfyaic870zh3lhgq")))))
+ (home-page "https://github.com/JuliaLang/tree/master/deps/")))
+
+(define (julia-patch-url version name)
(string-append "https://raw.githubusercontent.com/JuliaLang/julia/v" version
- "/deps/patches/" name))
+ "/deps/patches/" name ".patch"))
-(define (llvm-patch name sha)
- (let ((version "1.1.1"))
+(define (julia-patch name sha)
+ (let ((version "1.3.1"))
(origin (method url-fetch)
- (uri (llvm-patch-url version name))
+ (uri (julia-patch-url version name))
(sha256 (base32 sha))
(file-name name))))
@@ -98,41 +123,44 @@
;; but they are required to build Julia.
;; Discussion: https://bugs.debian.org/cgi-bin/bugreport.cgi?bug=919628
(patches
- (list
- (llvm-patch "llvm-6.0-D44650.patch"
- "1336q4vqayr94wdcnlmcxh90mjdh34dzw9x2cbiqjnx9b1j8fxyb")
- (llvm-patch "llvm-6.0-DISABLE_ABI_CHECKS.patch"
- "014fawd1ba7yckalypfld22zgic87x9nx3cim42zrwygywd36pyg")
- (llvm-patch "llvm-6.0-NVPTX-addrspaces.patch"
- "1qdi2zmrjsrj0h84zv2vyly2hjcn4f67mfy0s1q353g4v4jkscqc")
- (llvm-patch "llvm-6.0.0_D27296-libssp.patch"
- "0s5hi2r1j63i8m6ig1346crx2aiv9f7rgb3mg80kw1wx5y7pdpfh")
- (llvm-patch "llvm-D27629-AArch64-large_model_6.0.1.patch"
- "1qrshmlqvnasdyc158vfn3hnbigqph3lsq7acb9w8lwkpnnm2j4z")
- (llvm-patch "llvm-D34078-vectorize-fdiv.patch"
- "1696hg84a0jxcnggvqsc2cdp271hf9a44p4qsd078qm1mfawkaay")
- (llvm-patch "llvm-D42262-jumpthreading-not-i1.patch"
- "1c8w210gwidbnkkw8anp17dk5pnxws2fl3mb2qxh7y9wzfpixgaq")
- (llvm-patch "llvm-D44892-Perf-integration.patch"
- "0r37jd0ssh2k1pndkfd5blgpg9z90im4vlzprhb0n0wwz45g4b05")
- (llvm-patch "llvm-D46460.patch"
- "1miqgswdc0qvbaf4571c2xkxyp9ais06b1bcpa83sq22vr4hbsfb")
- (llvm-patch "llvm-D49832-SCEVPred.patch"
- "0v5c88hgqj6dymv3j86ca5mhpqab5fbnrvjiw1nvnrnya9l4dlbn")
- (llvm-patch "llvm-D50010-VNCoercion-ni.patch"
- "0iblb3q1xixwrb12jpb89h3ywmqmzdp6aqp416j4ncwakyjhhfkp")
- (llvm-patch "llvm-D50167-scev-umin.patch"
- "1f2rakcnnyhr7w10k7gqg0k0491pyvx5ijplivw557f714ys3q6v")
- (llvm-patch "llvm-OProfile-line-num.patch"
- "1jvbbmwyags0xfwamb13qrf3rgcz9i1r03m9lava7swag8xb78c7")
- (llvm-patch "llvm-PPC-addrspaces.patch"
- "1f23nhsxh2s3jskbgs7da9nwg3s1hrkbk5aahl08x41wi3mny01p")
- (llvm-patch "llvm-rL323946-LSRTy.patch"
- "10cz3vy1yw0w643z7xx021wa4kymx9fcm3bjg61s6vzdqd6d9fns")
- (llvm-patch "llvm-rL326967-aligned-load.patch"
- "04jxnv32yj5x17hqhi8g2p8rhgp38gmjzr871w7z8s44pq10v9v4")
- (llvm-patch "llvm-rL327898.patch"
- "15ah49gbsll23z28kpyahi5vl0fh3fkxcgd1zmxxdcl96s3x8bnq")))))
+ (map (match-lambda
+ ((name hash)
+ (julia-patch name hash)))
+ (list
+ '("llvm-6.0-D44650"
+ "1336q4vqayr94wdcnlmcxh90mjdh34dzw9x2cbiqjnx9b1j8fxyb")
+ '("llvm-6.0-DISABLE_ABI_CHECKS"
+ "014fawd1ba7yckalypfld22zgic87x9nx3cim42zrwygywd36pyg")
+ '("llvm-6.0-NVPTX-addrspaces"
+ "1qdi2zmrjsrj0h84zv2vyly2hjcn4f67mfy0s1q353g4v4jkscqc")
+ '("llvm-6.0.0_D27296-libssp"
+ "0s5hi2r1j63i8m6ig1346crx2aiv9f7rgb3mg80kw1wx5y7pdpfh")
+ '("llvm-D27629-AArch64-large_model_6.0.1"
+ "1qrshmlqvnasdyc158vfn3hnbigqph3lsq7acb9w8lwkpnnm2j4z")
+ '("llvm-D34078-vectorize-fdiv"
+ "1696hg84a0jxcnggvqsc2cdp271hf9a44p4qsd078qm1mfawkaay")
+ '("llvm-D42262-jumpthreading-not-i1"
+ "1c8w210gwidbnkkw8anp17dk5pnxws2fl3mb2qxh7y9wzfpixgaq")
+ '("llvm-D44892-Perf-integration"
+ "0r37jd0ssh2k1pndkfd5blgpg9z90im4vlzprhb0n0wwz45g4b05")
+ '("llvm-D46460"
+ "1miqgswdc0qvbaf4571c2xkxyp9ais06b1bcpa83sq22vr4hbsfb")
+ '("llvm-D49832-SCEVPred"
+ "0v5c88hgqj6dymv3j86ca5mhpqab5fbnrvjiw1nvnrnya9l4dlbn")
+ '("llvm-D50010-VNCoercion-ni"
+ "0iblb3q1xixwrb12jpb89h3ywmqmzdp6aqp416j4ncwakyjhhfkp")
+ '("llvm-D50167-scev-umin"
+ "1f2rakcnnyhr7w10k7gqg0k0491pyvx5ijplivw557f714ys3q6v")
+ '("llvm-OProfile-line-num"
+ "1jvbbmwyags0xfwamb13qrf3rgcz9i1r03m9lava7swag8xb78c7")
+ '("llvm-PPC-addrspaces"
+ "1f23nhsxh2s3jskbgs7da9nwg3s1hrkbk5aahl08x41wi3mny01p")
+ '("llvm-rL323946-LSRTy"
+ "10cz3vy1yw0w643z7xx021wa4kymx9fcm3bjg61s6vzdqd6d9fns")
+ '("llvm-rL326967-aligned-load"
+ "04jxnv32yj5x17hqhi8g2p8rhgp38gmjzr871w7z8s44pq10v9v4")
+ '("llvm-rL327898"
+ "15ah49gbsll23z28kpyahi5vl0fh3fkxcgd1zmxxdcl96s3x8bnq"))))))
(arguments
(substitute-keyword-arguments (package-arguments llvm-6)
((#:configure-flags flags)
@@ -158,7 +186,7 @@
(define-public julia
(package
(name "julia")
- (version "1.1.1")
+ (version "1.3.1")
(source (origin
(method url-fetch)
(uri (string-append
@@ -166,7 +194,9 @@
version "/julia-" version ".tar.gz"))
(sha256
(base32
- "0hk983mywimclgnjc41zmlppm5kfdz2aj85ky07p49ilcqxi998f"))))
+ "1nwkmr9j55g1zkxdchnid1h022s0is52vx23niksshgvh793g41x"))
+ (patches
+ (search-patches "julia-SOURCE_DATE_EPOCH-mtime.patch"))))
(build-system gnu-build-system)
(arguments
`(#:test-target "test"
@@ -188,30 +218,25 @@
(add-after 'unpack 'prepare-deps
(lambda* (#:key inputs #:allow-other-keys)
(mkdir "deps/srccache")
- (copy-file (assoc-ref inputs "dsfmt")
- "deps/srccache/dsfmt-2.2.3.tar.gz")
+ ;; no USE_SYSTEM_{OBJCONV/LIBWHICH}
(copy-file (assoc-ref inputs "objconv")
"deps/srccache/objconv.zip")
- (copy-file (assoc-ref inputs "suitesparse")
- "deps/srccache/SuiteSparse-4.4.5.tar.gz")
- (copy-file (string-append (assoc-ref inputs "virtualenv")
- "/bin/virtualenv")
- "julia-env")
(copy-file (assoc-ref inputs "libwhich")
(string-append "deps/srccache/libwhich-"
"81e9723c0273d78493dc8c8ed570f68d9ce7e89e"
".tar.gz"))
- (copy-file (assoc-ref inputs "rmath")
- "deps/srccache/Rmath-julia-0.1.tar.gz")
;; needed by libwhich
(setenv "LD_LIBRARY_PATH"
(string-join (map (lambda (pkg)
(string-append (assoc-ref inputs pkg)
"/lib"))
- '("arpack-ng" "fftw" "gmp" "lapack"
- "libgit2" "mpfr" "openblas" "openlibm"
- "openspecfun" "pcre2"))
+ '("arpack-ng" "curl" "dsfmt"
+ "gmp" "lapack"
+ "libssh2" "libgit2"
+ "mbedtls" "mpfr"
+ "openblas" "openlibm" "pcre2"
+ "suitesparse"))
":"))
#t))
;; FIXME: Building the documentation requires Julia packages that
@@ -233,44 +258,12 @@
;; using the output of "/sbin/ldconfig -p". Since ldconfig is not
;; used in Guix, we patch runtime_ccall.cpp to contain a static map.
(lambda* (#:key inputs #:allow-other-keys)
- (use-modules (ice-9 match))
- (substitute* "src/runtime_ccall.cpp"
- ;; Patch out invocations of '/sbin/ldconfig' to avoid getting
- ;; error messages about missing '/sbin/ldconfig' on Guix System.
- (("popen\\(.*ldconfig.*\\);")
- "NULL;\n")
-
- ;; Populate 'sonameMap'.
- (("jl_read_sonames.*;")
- (string-join
- (map (match-lambda
- ((input libname soname)
- (string-append
- "sonameMap[\"" libname "\"] = "
- "\"" (assoc-ref inputs input) "/lib/" soname "\";")))
- '(("libc" "libc" "libc.so.6")
- ("pcre2" "libpcre2-8" "libpcre2-8.so")
- ("mpfr" "libmpfr" "libmpfr.so")
- ("openblas" "libblas" "libopenblas.so")
- ("arpack-ng" "libarpack" "libarpack.so")
- ("lapack" "liblapack" "liblapack.so")
- ("libgit2" "libgit2" "libgit2.so")
- ("gmp" "libgmp" "libgmp.so")
- ("openspecfun" "libopenspecfun" "libopenspecfun.so")
- ("fftw" "libfftw3" "libfftw3_threads.so")
- ("fftwf" "libfftw3f" "libfftw3f_threads.so"))))))
- (substitute* "base/math.jl"
- (("const libm = Base.libm_name")
- (string-append "const libm = \""
- (assoc-ref inputs "openlibm")
- "/lib/libopenlibm.so"
- "\""))
- (("const openspecfun = \"libopenspecfun\"")
- (string-append "const openspecfun = \""
- (assoc-ref inputs "openspecfun")
- "/lib/libopenspecfun.so"
- "\"")))
- #t))
+ (substitute* "base/math.jl"
+ (("const libm = Base.libm_name")
+ (string-append "const libm = \""
+ (assoc-ref inputs "openlibm")
+ "/lib/libopenlibm.so"
+ "\"")))))
(add-before 'build 'fix-include-and-link-paths
(lambda* (#:key inputs #:allow-other-keys)
;; LIBUTF8PROC is a linker flag, not a build target. It is
@@ -278,10 +271,10 @@
;; collection of build targets and a list of libraries to link
;; against.
(substitute* "src/flisp/Makefile"
- (("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\): \\$\\(OBJS\\) \\$\\(LIBFILES_release\\)")
- "$(BUILDDIR)/$(EXENAME): $(OBJS) $(LLT_release)")
- (("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\)-debug: \\$\\(DOBJS\\) \\$\\(LIBFILES_debug\\)")
- "$(BUILDDIR)/$(EXENAME)-debug: $(DOBJS) $(LLT_debug)"))
+ (("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\)\\$\\(EXE\\): \\$\\(OBJS\\) \\$\\(LIBFILES_release\\)")
+ "$(BUILDDIR)/$(EXENAME)$(EXE): $(OBJS) $(LLT_release)")
+ (("\\$\\(BUILDDIR\\)/\\$\\(EXENAME\\)-debug$(EXE): \\$\\(DOBJS\\) \\$\\(LIBFILES_debug\\)")
+ "$(BUILDDIR)/$(EXENAME)-debug\\$\\(EXE\\): $(DOBJS) $(LLT_debug)"))
;; The REPL must be linked with libuv.
(substitute* "ui/Makefile"
@@ -296,39 +289,50 @@
"/include/uv/errno.h")))
#t))
(add-before 'build 'replace-default-shell
- (lambda _
- (substitute* "base/client.jl"
- (("/bin/sh") (which "sh")))
- #t))
- (add-after 'unpack 'hardcode-paths
(lambda _
- (substitute* "stdlib/InteractiveUtils/src/InteractiveUtils.jl"
- (("`which") (string-append "`" (which "which")))
- (("`wget") (string-append "`" (which "wget"))))
+ (substitute* "base/client.jl"
+ (("/bin/sh") (which "sh")))
+ #t))
+ (add-before 'build 'fix-precompile
+ (lambda _
+ (substitute* "base/loading.jl"
+ (("something(Base.active_project(), \"\")") "\"\""))
#t))
(add-before 'check 'disable-broken-tests
(lambda _
- (define (touch file-name)
- (call-with-output-file file-name (const #t)))
- ;; FIXME: All git tests works except this one. But *THIS* "fix"
- ;; is not working, so right now I'm disabling all libgit2.jl tests
- ;; (substitute* "stdlib/LibGit2/test/libgit2.jl"
- ;; (("!LibGit2.use_http_path(cfg, github_cred)") "true")
- ;; (("LibGit2.use_http_path(cfg, mygit_cred)") "true"))
- (map (lambda (test)
- (delete-file test)
- (touch test))
- '("stdlib/Sockets/test/runtests.jl"
- "stdlib/Distributed/test/runtests.jl"
- ;; FIXME: see above
- "stdlib/LibGit2/test/libgit2.jl"))
- (substitute* "test/choosetests.jl"
- ;; These tests fail, probably because some of the input
- ;; binaries have been stripped and thus backtraces don't look
- ;; as expected.
- (("\"backtrace\",") "")
- (("\"cmdlineargs\",") ""))
- #t)))
+ (substitute* "test/choosetests.jl"
+ (("tests = testnames")
+ ;; Those failings are not deterministic. They depends on the
+ ;; running order. I think it depends on the number of
+ ;; runners, disabling it for now
+ ;; https://github.com/JuliaLang/julia/issues/34330
+ "tests = filter(e->!in(e,[\"backtrace\",\"exceptions\",
+ \"stress\",\"precompile\",
+ \"client\",\"stacktraces\"]),
+ testnames)"))
+ ;; When HOME is not set, julia calls uv_os_homedir, which in
+ ;; turns call getpwuid_r. Add the HOME env variable to the
+ ;; external julia call to fix this
+ (substitute* "test/cmdlineargs.jl"
+ (("\"JULIA_PROJECT\"") "\"HOME\"=>\"/tmp\", \"JULIA_PROJECT\""))
+ ;; Marking the test as broken as it's a known bug:
+ ;; https://github.com/JuliaLang/julia/issues/32377
+ (substitute* "stdlib/REPL/test/replcompletions.jl"
+ (("@test count") "@test_broken count"))
+ #t))
+ (add-after 'install 'make-wrapper
+ (lambda* (#:key inputs outputs #:allow-other-keys)
+ (let* ((out (assoc-ref outputs "out"))
+ (bin (string-append out "/bin"))
+ (program "julia"))
+ (with-directory-excursion bin
+ (wrap-program program
+ `("JULIA_LOAD_PATH" ":" prefix
+ ("" "$JULIA_LOAD_PATH")))
+ (wrap-program program
+ `("JULIA_DEPOT_PATH" ":" prefix
+ ("" "$JULIA_DEPOT_PATH"))))
+ #t))))
#:make-flags
(list
(string-append "prefix=" (assoc-ref %outputs "out"))
@@ -346,25 +350,20 @@
(_ "MARCH=UNSUPPORTED"))
"CONFIG_SHELL=bash" ;needed to build bundled libraries
- "USE_SYSTEM_DSFMT=0" ;not packaged for Guix and upstream has no
- ;build system for a shared library.
+ ;; list of "USE_SYSTEM_*" is here:
+ ;; https://github.com/JuliaLang/julia/blob/v1.3.1/Make.inc
+ "USE_SYSTEM_DSFMT=1"
+ "USE_SYSTEM_P7ZIP=1"
"USE_SYSTEM_LAPACK=1"
"USE_SYSTEM_BLAS=1"
"USE_BLAS64=0" ;needed when USE_SYSTEM_BLAS=1
"LIBBLAS=-lopenblas"
"LIBBLASNAME=libopenblas"
- "USE_SYSTEM_FFTW=1"
- "LIBFFTWNAME=libfftw3"
- "LIBFFTWFNAME=libfftw3f"
-
- ;; TODO: Suitesparse does not install shared libraries, so we cannot
- ;; use the suitesparse package.
- ;; "USE_SYSTEM_SUITESPARSE=1"
- ;; (string-append "SUITESPARSE_INC=-I "
- ;; (assoc-ref %build-inputs "suitesparse")
- ;; "/include")
-
+ "USE_SYSTEM_SUITESPARSE=1"
+ (string-append "SUITESPARSE_INC=-I "
+ (assoc-ref %build-inputs "suitesparse")
+ "/include")
"USE_GPL_LIBS=1" ;proudly
"USE_SYSTEM_UTF8PROC=1"
(string-append "UTF8PROC_INC="
@@ -390,11 +389,16 @@
"USE_SYSTEM_MPFR=1"
"USE_SYSTEM_ARPACK=1"
"USE_SYSTEM_LIBGIT2=1"
- "USE_SYSTEM_ZLIB=1"
- "USE_SYSTEM_OPENSPECFUN=1")))
+ (string-append "LIBUV="
+ (assoc-ref %build-inputs "libuv")
+ "/lib/libuv.so")
+ (string-append "LIBUV_INC="
+ (assoc-ref %build-inputs "libuv")
+ "/include")
+ "USE_SYSTEM_ZLIB=1")))
(inputs
`(("llvm" ,llvm-julia)
-
+ ("p7zip" ,p7zip)
;; The bundled version is 3.3.0 so stick to that version. With other
;; versions, we get test failures in 'linalg/arnoldi' as described in
;; <https://bugs.gnu.org/30282>.
@@ -403,12 +407,12 @@
("coreutils" ,coreutils) ;for bindings to "mkdir" and the like
("lapack" ,lapack)
("openblas" ,openblas) ;Julia does not build with Atlas
- ("libunwind" ,libunwind)
+ ("libunwind" ,libunwind-julia)
("openlibm" ,openlibm)
- ("openspecfun" ,openspecfun)
+ ("mbedtls" ,mbedtls-apache)
+ ("curl" ,curl)
("libgit2" ,libgit2)
- ("fftw" ,fftw)
- ("fftwf" ,fftwf)
+ ("libssh2" ,libssh2)
("fortran" ,gfortran)
("libuv" ,libuv-julia)
("pcre2" ,pcre2)
@@ -418,31 +422,12 @@
("which" ,which)
("zlib" ,zlib)
("gmp" ,gmp)
- ("virtualenv" ,python2-virtualenv)
+ ("suitesparse" ,suitesparse)
;; FIXME: The following inputs are downloaded from upstream to allow us
;; to use the lightweight Julia release tarball. Ideally, these inputs
;; would eventually be replaced with proper Guix packages.
-
- ;; TODO: run "make -f contrib/repackage_system_suitesparse4.make" to copy static lib
- ;; Find dependency versions here:
- ;; https://raw.githubusercontent.com/JuliaLang/julia/77a2c1e245c85812dc1c7687540beedecc52758f/deps/Versions.make
- ("rmath"
- ,(origin
- (method git-fetch)
- (uri (git-reference
- (url "https://github.com/JuliaLang/Rmath-julia")
- (commit "v0.1")))
- (file-name "rmath-julia-0.1-checkout")
- (sha256
- (base32
- "1zkpy0cg5zivq40zbhbdgj9128fqzs2j94wkwih8nc6xaj3gp9p6"))))
- ("suitesparse"
- ,(origin
- (method url-fetch)
- (uri "http://faculty.cse.tamu.edu/davis/SuiteSparse/SuiteSparse-4.4.5.tar.gz")
- (sha256
- (base32
- "1jcbxb8jx5wlcixzf6n5dca2rcfx6mlcms1k2rl5gp67ay3bix43"))))
+ ;; Find dependencies versions here:
+ ;; https://raw.githubusercontent.com/JuliaLang/julia/v1.3.0/deps/Versions.make
("objconv"
,(origin
(method url-fetch)
@@ -466,16 +451,8 @@
".tar.gz"))
(sha256
(base32
- "1p7zg31kpmpbmh1znrk1xrbd074agx13b9q4dcw8n2zrwwdlbz3b")))))
- ("dsfmt"
- ,(origin
- (method url-fetch)
- (uri (string-append
- "http://www.math.sci.hiroshima-u.ac.jp/~m-mat/MT/"
- "SFMT/dSFMT-src-2.2.3.tar.gz"))
- (sha256
- (base32
- "03kaqbjbi6viz0n33dk5jlf6ayxqlsq4804n7kwkndiga9s4hd42"))))))
+ "1p7zg31kpmpbmh1znrk1xrbd074agx13b9q4dcw8n2zrwwdlbz3b")))))
+ ("dsfmt" ,dsfmt)))
(native-inputs
`(("openssl" ,openssl)
("perl" ,perl)
@@ -485,7 +462,10 @@
(native-search-paths
(list (search-path-specification
(variable "JULIA_LOAD_PATH")
- (files (list "share/julia/packages/")))))
+ (files (list "share/julia/packages/")))
+ (search-path-specification
+ (variable "JULIA_DEPOT_PATH")
+ (files (list "share/julia/")))))
;; Julia is not officially released for ARM and MIPS.
;; See https://github.com/JuliaLang/julia/issues/10639
(supported-systems '("i686-linux" "x86_64-linux" "aarch64-linux"))
diff --git a/gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch b/gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch
new file mode 100644
index 0000000000..b60f284923
--- /dev/null
+++ b/gnu/packages/patches/julia-SOURCE_DATE_EPOCH-mtime.patch
@@ -0,0 +1,22 @@
+Fix one of upstream non-determinism, tracked here:
+
+https://github.com/JuliaLang/julia/issues/34115
+https://github.com/JuliaLang/julia/issues/25900
+
+
+Patch by Nicoló Balzarotti <nicolo@nixo.xyz>.
+
+--- a/base/loading.jl
++++ b/base/loading.jl
+@@ -807,7 +807,10 @@
+ path = normpath(joinpath(dirname(prev), _path))
+ end
+ if _track_dependencies[]
+- push!(_require_dependencies, (mod, path, mtime(path)))
++ push!(_require_dependencies,
++ (mod, path,
++ haskey(ENV, "SOURCE_DATE_EPOCH") ?
++ parse(Float64, ENV["SOURCE_DATE_EPOCH"]) : mtime(path)))
+ end
+ return path, prev
+ end
--
2.25.0
[-- Attachment #4: 0003-gnu-julia-build-system-Enable-tests-fix-precompilati.patch --]
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From 69bfdff9a8772bbe9254c9cd3a97966e059060af Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:28:45 +0100
Subject: [PATCH 03/16] gnu: julia-build-system: Enable tests, fix
precompilation.
---
guix/build-system/julia.scm | 2 +-
guix/build/julia-build-system.scm | 71 +++++++++++++++----------------
2 files changed, 36 insertions(+), 37 deletions(-)
diff --git a/guix/build-system/julia.scm b/guix/build-system/julia.scm
index 488fe9bb1d..d3cb41c054 100644
--- a/guix/build-system/julia.scm
+++ b/guix/build-system/julia.scm
@@ -75,7 +75,7 @@
(define* (julia-build store name inputs
#:key source
- (tests? #f)
+ (tests? #t)
(phases '(@ (guix build julia-build-system)
%standard-phases))
(outputs '("out"))
diff --git a/guix/build/julia-build-system.scm b/guix/build/julia-build-system.scm
index ff6fcf5fe3..2916775c9d 100644
--- a/guix/build/julia-build-system.scm
+++ b/guix/build/julia-build-system.scm
@@ -1,5 +1,5 @@
;;; GNU Guix --- Functional package management for GNU
-;;; Copyright © 2019 Nicolò Balzarotti <nicolo@nixo.xyz>
+;;; Copyright © 2019, 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -37,54 +37,53 @@
;; subpath where we store the package content
(define %package-path "/share/julia/packages/")
-(define (generate-load-path inputs outputs)
- (string-append
- (string-join (map (match-lambda
- ((_ . path)
- (string-append path %package-path)))
- ;; Restrict to inputs beginning with "julia-".
- (filter (match-lambda
- ((name . _)
- (string-prefix? "julia-" name)))
- inputs))
- ":")
- (string-append ":" (assoc-ref outputs "out") %package-path)
- ;; stdlib is always required to find Julia's standard libraries.
- ;; usually there are other two paths in this variable:
- ;; "@" and "@v#.#"
- ":@stdlib"))
-
(define* (install #:key source inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(package-dir (string-append out %package-path
- (string-append
- (strip-store-file-name source)))))
- (setenv "JULIA_LOAD_PATH" (generate-load-path inputs outputs))
+ (strip-store-file-name source))))
(mkdir-p package-dir)
- (copy-recursively source package-dir))
+ (copy-recursively (getcwd) package-dir))
#t)
-;; TODO: Precompilation is working, but I don't know how to tell
-;; julia to use use it. If (on rantime) we set HOME to
-;; store path, julia tries to write files there (failing)
(define* (precompile #:key source inputs outputs #:allow-other-keys)
(let* ((out (assoc-ref outputs "out"))
(builddir (string-append out "/share/julia/"))
(package (strip-store-file-name source)))
(mkdir-p builddir)
(setenv "JULIA_DEPOT_PATH" builddir)
- (setenv "JULIA_LOAD_PATH" (generate-load-path inputs outputs))
- ;; Actual precompilation
- (invoke-julia (string-append "using " package)))
+ ;; add new package dir to the load path
+ (setenv "JULIA_LOAD_PATH"
+ (string-append builddir "packages/"
+ (if (getenv "JULIA_LOAD_PATH")
+ (string-append ":" (getenv "JULIA_LOAD_PATH"))
+ "")))
+ ;; Actual precompilation.
+ (invoke-julia
+ ;; when using julia as a user, julia writes precompile cache to the first
+ ;; entry of the DEPOT_PATH list (by default, the home dir). We want to
+ ;; write it to the store, so let's push the store path as the first
+ ;; element of DEPOT_PATH. Once the cache file exists, this hack is not
+ ;; needed anymore (like in the check phase). If the user install new
+ ;; pacakges, those will be installed and precompiled in the home dir
+ (string-append "pushfirst!(DEPOT_PATH, pop!(DEPOT_PATH)); using " package)))
#t)
-(define* (check #:key source inputs outputs #:allow-other-keys)
- (let* ((out (assoc-ref outputs "out"))
- (package (strip-store-file-name source))
- (builddir (string-append out "/share/julia/")))
- (setenv "JULIA_DEPOT_PATH" builddir)
- (setenv "JULIA_LOAD_PATH" (generate-load-path inputs outputs))
- (invoke-julia (string-append "using Pkg;Pkg.test(\"" package "\")")))
+(define* (check #:key tests? source outputs #:allow-other-keys)
+ (if tests?
+ (let* ((out (assoc-ref outputs "out"))
+ (package (strip-store-file-name source))
+ (builddir (string-append out "/share/julia/")))
+ (setenv "HOME" "/tmp")
+ (setenv "JULIA_DEPOT_PATH" builddir)
+ (setenv "JULIA_LOAD_PATH"
+ (string-append builddir "packages/" ":"
+ (or (getenv "JULIA_LOAD_PATH")
+ "")))
+ ;; tests assume they are run from the test directory
+ (with-directory-excursion
+ (string-append builddir "packages/" package "/test/")
+ (invoke "julia" "runtests.jl")))
+ (format #t "test suite not run~%"))
#t)
(define (julia-create-package-toml outputs source
@@ -119,7 +118,7 @@ version = \"" version "\"
(delete 'check) ; tests must be run after installation
(replace 'install install)
(add-after 'install 'precompile precompile)
- ;; (add-after 'install 'check check)
+ (add-after 'precompile 'check check)
;; TODO: In the future we could add a "system-image-generation" phase
;; where we use PackageCompiler.jl to speed up package loading times
(delete 'configure)
--
2.25.0
[-- Attachment #5: 0004-gnu-Add-julia-compat.patch --]
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From a185f2d8112d55fe34fe5640edc6e4f46fece226 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:30:39 +0100
Subject: [PATCH 04/16] gnu: Add julia-compat.
* gnu/packages/julia-xyz.scm (julia-compat): New variable.
* gnu/packages/julia-xyz.scm: New file.
* gnu/local.mk: Add gnu/packages/julia-xyz.scm.
---
gnu/local.mk | 1 +
gnu/packages/julia-xyz.scm | 45 ++++++++++++++++++++++++++++++++++++++
2 files changed, 46 insertions(+)
create mode 100644 gnu/packages/julia-xyz.scm
diff --git a/gnu/local.mk b/gnu/local.mk
index c2273d5745..1ebcc45a4c 100644
--- a/gnu/local.mk
+++ b/gnu/local.mk
@@ -281,6 +281,7 @@ GNU_SYSTEM_MODULES = \
%D%/packages/jrnl.scm \
%D%/packages/jose.scm \
%D%/packages/julia.scm \
+ %D%/packages/julia-xyz.scm \
%D%/packages/jupyter.scm \
%D%/packages/kawa.scm \
%D%/packages/kde.scm \
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
new file mode 100644
index 0000000000..abcfc4d0cf
--- /dev/null
+++ b/gnu/packages/julia-xyz.scm
@@ -0,0 +1,45 @@
+;;; GNU Guix --- Functional package management for GNU
+;;; Copyright © 2020 Nicolò Balzarotti <nicolo@nixo.xyz>
+;;;
+;;; This file is part of GNU Guix.
+;;;
+;;; GNU Guix is free software; you can redistribute it and/or modify it
+;;; under the terms of the GNU General Public License as published by
+;;; the Free Software Foundation; either version 3 of the License, or (at
+;;; your option) any later version.
+;;;
+;;; GNU Guix is distributed in the hope that it will be useful, but
+;;; WITHOUT ANY WARRANTY; without even the implied warranty of
+;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+;;; GNU General Public License for more details.
+;;;
+;;; You should have received a copy of the GNU General Public License
+;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
+
+(define-module (gnu packages julia-xyz)
+ #:use-module ((guix licenses) #:prefix license:)
+ #:use-module (guix packages)
+ #:use-module (guix git-download)
+ #:use-module (guix build-system julia))
+
+(define-public julia-compat
+ (package
+ (name "julia-compat")
+ (version "3.6.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaLang/Compat.jl")
+ (commit (string-append "v" version))))
+ (file-name "Compat")
+ (sha256
+ (base32 "0dxy0kpwgz3a9w665lp154x9yrnic89f2b27b1nmh69jhnnb2zgr"))))
+ (build-system julia-build-system)
+ (home-page "https://github.com/JuliaLang/Compat.jl")
+ (synopsis "Compatibility across Julia versions")
+ (description "The Compat package is designed to ease interoperability
+between older and newer versions of the Julia language. The Compat package
+provides a macro that lets you use the latest syntax in a backwards-compatible
+way.")
+ (license license:expat)))
--
2.25.0
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From a7a34a28d99bd9411d18e0e7f3d4efb406f2a817 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:33:08 +0100
Subject: [PATCH 05/16] gnu: Add julia-sha.
* gnu/packages/julia-xyz.scm (julia-sha): New variable.
---
gnu/packages/julia-xyz.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index abcfc4d0cf..91d497a0ce 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -43,3 +43,27 @@ between older and newer versions of the Julia language. The Compat package
provides a macro that lets you use the latest syntax in a backwards-compatible
way.")
(license license:expat)))
+
+(define-public julia-sha
+ (package
+ (name "julia-sha")
+ (version "0.5.7")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/staticfloat/SHA.jl")
+ ;; tests fixed in this untagged version
+ (commit "97b17a7fabf894257726c33cbd78255ac380906d")))
+ (file-name "SHA")
+ (sha256
+ (base32 "169y78cmppj117cmh8ncnyh381caf9dsklaks5l40mia9jdcqbgl"))))
+ (build-system julia-build-system)
+ (propagated-inputs `(("julia-compat" ,julia-compat)))
+ (home-page "https://github.com/staticfloat/SHA.jl")
+ (synopsis
+ "Performant, 100% native-julia SHA1, SHA2, and SHA3 implementation")
+ (description "Julia package implementing SHA algorithms. Each exported
+function takes in either an @code{Array{UInt8}}, a @code{ByteString} or an
+@code{IO} object.")
+ (license license:expat)))
--
2.25.0
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From 3fae18e43bd9cd0931d153a0b47bd2ba90d7eedb Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:42:00 +0100
Subject: [PATCH 06/16] gnu: Add julia-binaryprovider.
* gnu/packages/julia-xyz.scm (julia-binaryprovider): New variable.
---
gnu/packages/julia-xyz.scm | 28 +++++++++++++++++++++++++++-
1 file changed, 27 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 91d497a0ce..86c0a6c3e9 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -20,7 +20,33 @@
#:use-module ((guix licenses) #:prefix license:)
#:use-module (guix packages)
#:use-module (guix git-download)
- #:use-module (guix build-system julia))
+ #:use-module (guix build-system julia)
+ #:use-module (gnu packages curl))
+
+(define-public julia-binaryprovider
+ (package
+ (name "julia-binaryprovider")
+ (version "0.5.8")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaPackaging/BinaryProvider.jl")
+ (commit (string-append "v" version))))
+ (file-name "BinaryProvider")
+ (sha256
+ (base32 "174jmg4w8ncgfhdvfnm0p4cnlayw31j4s9sksqlwz1sipywqvww7"))))
+ (build-system julia-build-system)
+ ;; We don't really need BinaryProvider (as guix provides the binaries) but
+ ;; since it's a dependency of other packages we want to precompile it.
+ (arguments `(#:tests? #f))
+ (propagated-inputs `(("julia-sha" ,julia-sha)))
+ (inputs `(("curl" ,curl)))
+ (home-page "https://github.com/JuliaPackaging/BinaryProvider.jl")
+ (synopsis "Reliable Binary provider for Julia")
+ (description "@code{BinaryProvider.jl} simplifies the installation of
+binaries required by julia packages.")
+ (license license:expat)))
(define-public julia-compat
(package
--
2.25.0
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From 3f4e7fdbe183b950ef57c71b25de13ffc29eea68 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:42:59 +0100
Subject: [PATCH 07/16] gnu: Add julia-inifile.
* gnu/packages/julia-xyz.scm (julia-inifile): New variable.
---
gnu/packages/julia-xyz.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 86c0a6c3e9..213aa0543c 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -70,6 +70,26 @@ provides a macro that lets you use the latest syntax in a backwards-compatible
way.")
(license license:expat)))
+(define-public julia-inifile
+ (package
+ (name "julia-inifile")
+ (version "0.5.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaIO/IniFile.jl")
+ (commit "8ba59958495fa276d6489d2c3903e765d75e0bc0")))
+ (file-name "IniFile")
+ (sha256
+ (base32 "11h6f99jpbg729lplw841m68jprka7q3n8yw390bndlmcdsjabpd"))))
+ (build-system julia-build-system)
+ (home-page "https://github.com/JuliaIO/IniFile.jl")
+ (synopsis "Reading Windows-style INI files")
+ (description "This is a julia package that defines an IniFile type that
+allows to interface with @file{.ini} files.")
+ (license license:expat)))
+
(define-public julia-sha
(package
(name "julia-sha")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #9: 0008-gnu-Add-julia-mbedtls.patch --]
[-- Type: text/x-patch, Size: 3280 bytes --]
From 44e8535f4e8b72cdb99c396dab53badcd5b02073 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:43:37 +0100
Subject: [PATCH 08/16] gnu: Add julia-mbedtls.
* gnu/packages/julia-xyz.scm (julia-mbedtls): New variable.
---
gnu/packages/julia-xyz.scm | 55 +++++++++++++++++++++++++++++++++++++-
1 file changed, 54 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 213aa0543c..508b4835ca 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -21,7 +21,8 @@
#:use-module (guix packages)
#:use-module (guix git-download)
#:use-module (guix build-system julia)
- #:use-module (gnu packages curl))
+ #:use-module (gnu packages curl)
+ #:use-module (gnu packages tls))
(define-public julia-binaryprovider
(package
@@ -90,6 +91,58 @@ way.")
allows to interface with @file{.ini} files.")
(license license:expat)))
+(define-public julia-mbedtls
+ (package
+ (name "julia-mbedtls")
+ (version "0.7.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaLang/MbedTLS.jl")
+ (commit (string-append "v" version))))
+ (file-name "MbedTLS")
+ (sha256
+ (base32 "1a8snw9gi21lm6r3kh6ly7ngi99s9k5shqkfiizj3g9li20q23h2"))))
+ (build-system julia-build-system)
+ (propagated-inputs
+ `(("julia-binaryprovider" ,julia-binaryprovider)))
+ (inputs `(("mbedtls-apache" ,mbedtls-apache)))
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-before 'install 'disable-network-tests
+ (lambda _
+ (substitute* "test/runtests.jl"
+ (("testhost =") "return #"))
+ #t))
+ ;; Add binary dependency paths
+ (add-before 'precompile 'build-deps
+ (lambda* (#:key outputs source inputs #:allow-other-keys)
+ (let ((f (open-file
+ (string-append
+ (assoc-ref outputs "out")
+ "/share/julia/packages/"
+ (string-append
+ (strip-store-file-name source) "/deps/deps.jl"))
+ "w")))
+ (display (string-append "const libmbedcrypto = \""
+ (assoc-ref inputs "mbedtls-apache")
+ "/lib/libmbedcrypto.so\"\n") f)
+ (display (string-append "const libmbedtls = \""
+ (assoc-ref inputs "mbedtls-apache")
+ "/lib/libmbedtls.so\"\n") f)
+ (display (string-append "const libmbedx509 = \""
+ (assoc-ref inputs "mbedtls-apache")
+ "/lib/libmbedx509.so\"\n") f)
+ (close-port f))
+ #t)))))
+ (home-page "https://github.com/JuliaLang/MbedTLS.jl")
+ (synopsis "Apache's mbed TLS library wrapper")
+ (description "@code{MbedTLS.jl} provides a wrapper around the mbed TLS and
+cryptography C libary for Julia.")
+ (license license:expat)))
+
(define-public julia-sha
(package
(name "julia-sha")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #10: 0009-gnu-Add-julia-bufferedstreams.patch --]
[-- Type: text/x-patch, Size: 1695 bytes --]
From 2f205551cf5193a4d41541ba772b1db10f2f9248 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:46:35 +0100
Subject: [PATCH 09/16] gnu: Add julia-bufferedstreams.
* gnu/packages/julia-xyz.scm (julia-bufferedstreams): New variable.
---
gnu/packages/julia-xyz.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 508b4835ca..c26765f2a4 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -49,6 +49,31 @@
binaries required by julia packages.")
(license license:expat)))
+(define-public julia-bufferedstreams
+ (package
+ (name "julia-bufferedstreams")
+ (version "1.0.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/BioJulia/BufferedStreams.jl")
+ (commit (string-append "v" version))))
+ (file-name "BufferedStreams")
+ (sha256
+ (base32 "0sf4sxbq55mg2pwxyxf0c839z1lk0yxg8nmb7617bfbvw31cp88z"))))
+ (build-system julia-build-system)
+ ;; tests are freezing, see
+ ;; https://travis-ci.org/BioJulia/BufferedStreams.jl/jobs/491050182
+ (arguments '(#:tests? #f))
+ (propagated-inputs `(("julia-compat" ,julia-compat)))
+ (home-page "https://github.com/BioJulia/BufferedStreams.jl")
+ (synopsis "Fast composable IO streams")
+ (description "@code{BufferedStreams} provides buffering for IO
+operations. It can wrap any IO type automatically making incremental reading
+and writing faster.")
+ (license license:expat)))
+
(define-public julia-compat
(package
(name "julia-compat")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #11: 0010-gnu-Add-julia-parsers.patch --]
[-- Type: text/x-patch, Size: 1423 bytes --]
From 5a906605765854b7955a8530e89f63959f3cc2ff Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:48:25 +0100
Subject: [PATCH 10/16] gnu: Add julia-parsers.
* gnu/packages/julia-xyz.scm (julia-parsers): New variable.
---
gnu/packages/julia-xyz.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index c26765f2a4..22b1cc9914 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -168,6 +168,26 @@ allows to interface with @file{.ini} files.")
cryptography C libary for Julia.")
(license license:expat)))
+(define-public julia-parsers
+ (package
+ (name "julia-parsers")
+ (version "0.3.11")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaData/Parsers.jl")
+ (commit (string-append "v" version))))
+ (file-name "Parsers")
+ (sha256
+ (base32 "07dgcy12206a3lw55h00znq3yq4faczng6bbdn3lhc0l6jmclsly"))))
+ (build-system julia-build-system)
+ (home-page "https://github.com/JuliaData/Parsers.jl")
+ (synopsis "Fast parsing machinery for basic types in Julia")
+ (description "@code{Parsers} is a collection of type parsers and utilities
+for Julia")
+ (license license:expat)))
+
(define-public julia-sha
(package
(name "julia-sha")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #12: 0011-gnu-Add-julia-offsetarrays.patch --]
[-- Type: text/x-patch, Size: 1674 bytes --]
From 68f095c392924936f59c7df9ec2363f6054651ab Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:51:21 +0100
Subject: [PATCH 11/16] gnu: Add julia-offsetarrays.
* gnu/packages/julia-xyz.scm (julia-offsetarrays): New variable.
---
gnu/packages/julia-xyz.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 22b1cc9914..5cc7529c20 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -168,6 +168,30 @@ allows to interface with @file{.ini} files.")
cryptography C libary for Julia.")
(license license:expat)))
+(define-public julia-offsetarrays
+ (package
+ (name "julia-offsetarrays")
+ (version "1.0.2")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaArrays/OffsetArrays.jl")
+ (commit (string-append "v" version))))
+ (file-name "OffsetArrays")
+ (sha256
+ (base32 "0x86px7gynyzqqwan88z3lkq8yj0id4pa718l8xqj4yp9fbz440c"))))
+ (build-system julia-build-system)
+ ;; tests require Catindices, introducing a circular dependency
+ (arguments '(#:tests? #f))
+ (home-page "https://github.com/JuliaArrays/OffsetArrays.jl")
+ (synopsis "Fortran-like arrays with arbitrary, zero or negative starting
+indices")
+ (description "OffsetArrays provides Julia users with arrays that have
+arbitrary indices, similar to those found in some other programming languages
+like Fortran.")
+ (license license:expat)))
+
(define-public julia-parsers
(package
(name "julia-parsers")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #13: 0012-gnu-Add-julia-fixedpointnumbers.patch --]
[-- Type: text/x-patch, Size: 1924 bytes --]
From 3a0f60d4e21dd893ee11ddde0947c0323c9b5537 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 15:54:30 +0100
Subject: [PATCH 12/16] gnu: Add julia-fixedpointnumbers.
* gnu/packages/julia-xyz.scm (julia-fixedpointnumbers): New variable.
---
gnu/packages/julia-xyz.scm | 26 ++++++++++++++++++++++++++
1 file changed, 26 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 5cc7529c20..046c365b08 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -96,6 +96,32 @@ provides a macro that lets you use the latest syntax in a backwards-compatible
way.")
(license license:expat)))
+(define-public julia-fixedpointnumbers
+ (package
+ (name "julia-fixedpointnumbers")
+ (version "0.8.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaMath/FixedPointNumbers.jl")
+ (commit (string-append "v" version))))
+ (file-name "FixedPointNumbers")
+ (sha256
+ (base32 "0zi0va64vhnhqga62j7116m5alrkfzlv7qady4bq6v9sfrwfzvw1"))))
+ (build-system julia-build-system)
+ (propagated-inputs `(("julia-compat" ,julia-compat)))
+ (home-page "https://github.com/JuliaMath/FixedPointNumbers.jl")
+ (synopsis "Fixed point types for julia")
+ (description "This library implements fixed-point number types. A
+fixed-point number represents a fractional, or non-integral, number. In
+contrast with the more widely known floating-point numbers, with fixed-point
+numbers the decimal point doesn't \"float\": fixed-point numbers are
+effectively integers that are interpreted as being scaled by a constant
+factor. Consequently, they have a fixed number of digits (bits) after the
+decimal (radix) point.")
+ (license license:expat)))
+
(define-public julia-inifile
(package
(name "julia-inifile")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #14: 0013-gnu-Add-julia-orderedcollections.patch --]
[-- Type: text/x-patch, Size: 1797 bytes --]
From 8582ad38d348dae41be96b5c9ff9512748c6ee7b Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 16:08:00 +0100
Subject: [PATCH 13/16] gnu: Add julia-orderedcollections.
* gnu/packages/julia-xyz.scm (julia-orderedcollections): New variable.
---
gnu/packages/julia-xyz.scm | 24 ++++++++++++++++++++++++
1 file changed, 24 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 046c365b08..797c61ce6f 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -218,6 +218,30 @@ arbitrary indices, similar to those found in some other programming languages
like Fortran.")
(license license:expat)))
+(define-public julia-orderedcollections
+ (package
+ (name "julia-orderedcollections")
+ (version "1.1.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaCollections/OrderedCollections.jl")
+ ;; They added Package.toml after the 1.1.0 tag
+ (commit "7a789d72a40f4c446f59575f5d77a63df4391a24")))
+ (file-name "OrderedCollections")
+ (sha256
+ (base32 "09b3mlzkxcbc8wn0pji73591865li07q4kvvfzn9x4256mw47riq"))))
+ (build-system julia-build-system)
+ (home-page "https://github.com/JuliaCollections/OrderedCollections.jl")
+ (synopsis "Julia implementation of associative containers that preserve
+insertion order")
+ (description "This package implements OrderedDicts and OrderedSets, which
+are similar to containers in base Julia. However, during iteration the
+Ordered* containers return items in the order in which they were added to the
+collection.")
+ (license license:expat)))
+
(define-public julia-parsers
(package
(name "julia-parsers")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #15: 0014-gnu-Add-julia-datastructures.patch --]
[-- Type: text/x-patch, Size: 2152 bytes --]
From 3b122c28d94bd0bdd149a0e7d1031d81bc85face Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 16:08:25 +0100
Subject: [PATCH 14/16] gnu: Add julia-datastructures.
* gnu/packages/julia-xyz.scm (julia-datastructures): New variable.
---
gnu/packages/julia-xyz.scm | 43 ++++++++++++++++++++++++++++++++++++++
1 file changed, 43 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 797c61ce6f..a4a9939894 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -96,6 +96,49 @@ provides a macro that lets you use the latest syntax in a backwards-compatible
way.")
(license license:expat)))
+(define-public julia-datastructures
+ (package
+ (name "julia-datastructures")
+ (version "0.17.9")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaCollections/DataStructures.jl")
+ (commit (string-append "v" version))))
+ (file-name "DataStructures")
+ (sha256
+ (base32 "1gp5n99c1llwp2zfsh1iw9jr5hhjswrq7v8iwkp2vj7yp5vvy5lw"))))
+ (build-system julia-build-system)
+ (propagated-inputs
+ `(("julia-orderedcollections" ,julia-orderedcollections)))
+ (home-page "https://github.com/JuliaCollections/DataStructures.jl")
+ (synopsis "Julia implementation of Data structures")
+ (description "This package implements a variety of data structures,
+including:
+
+@enumerate
+@item Deque (implemented with an unrolled linked list)
+@item CircularBuffer
+@item CircularDeque
+@item Stack
+@item Queue
+@item Accumulators and Counters (i.e. Multisets / Bags)
+@item Disjoint Sets
+@item Binary Heap
+@item Mutable Binary Heap
+@item Ordered Dicts and Sets
+@item Dictionaries with Defaults
+@item Trie
+@item Linked List and Mutable Linked List
+@item Sorted Dict, Sorted Multi-Dict and Sorted Set
+@item DataStructures.IntSet
+@item Priority Queue
+@item Fenwick Tree
+@item SparseIntSet
+@end enumerate")
+ (license license:expat)))
+
(define-public julia-fixedpointnumbers
(package
(name "julia-fixedpointnumbers")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #16: 0015-gnu-Add-julia-json.patch --]
[-- Type: text/x-patch, Size: 1739 bytes --]
From e29caaaf651b750f8fcc734dab06921c81f4b226 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 16:09:38 +0100
Subject: [PATCH 15/16] gnu: Add julia-json.
* gnu/packages/julia-xyz.scm (julia-json): New variable.
---
gnu/packages/julia-xyz.scm | 25 +++++++++++++++++++++++++
1 file changed, 25 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index a4a9939894..5130663e48 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -185,6 +185,31 @@ decimal (radix) point.")
allows to interface with @file{.ini} files.")
(license license:expat)))
+(define-public julia-json
+ (package
+ (name "julia-json")
+ (version "0.21.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaIO/JSON.jl")
+ (commit (string-append "v" version))))
+ (file-name "JSON")
+ (sha256
+ (base32 "0knmfjhchd3ggy86dsfyb7l4v3fv5dcr207cgp54mj7rj96caqsm"))))
+ (build-system julia-build-system)
+ (propagated-inputs `(("julia-parsers" ,julia-parsers)))
+ ;; For some reason, the precompile cache for this package is broken,
+ ;; meaning that it will get re-generated at `using'
+ (inputs `(("julia-offsetarrays" ,julia-offsetarrays)
+ ("julia-datastructures" ,julia-datastructures)
+ ("julia-fixedpointnumbers" ,julia-fixedpointnumbers)))
+ (home-page "https://github.com/JuliaIO/JSON.jl")
+ (synopsis "JSON parsing and printing in Julia")
+ (description "Parsing and printing JSON in pure Julia.")
+ (license license:expat)))
+
(define-public julia-mbedtls
(package
(name "julia-mbedtls")
--
2.25.0
[-- Warning: decoded text below may be mangled, UTF-8 assumed --]
[-- Attachment #17: 0016-gnu-Add-julia-http.patch --]
[-- Type: text/x-patch, Size: 2457 bytes --]
From 238554a69cab1f7b1eedb93d453e78587b0e4597 Mon Sep 17 00:00:00 2001
From: nixo <nicolo@nixo.xyz>
Date: Mon, 24 Feb 2020 16:37:10 +0100
Subject: [PATCH 16/16] gnu: Add julia-http.
* gnu/packages/julia-xyz.scm (julia-http): New variable.
---
gnu/packages/julia-xyz.scm | 45 ++++++++++++++++++++++++++++++++++++++
1 file changed, 45 insertions(+)
diff --git a/gnu/packages/julia-xyz.scm b/gnu/packages/julia-xyz.scm
index 5130663e48..be3c776f49 100644
--- a/gnu/packages/julia-xyz.scm
+++ b/gnu/packages/julia-xyz.scm
@@ -165,6 +165,51 @@ factor. Consequently, they have a fixed number of digits (bits) after the
decimal (radix) point.")
(license license:expat)))
+(define-public julia-http
+ (package
+ (name "julia-http")
+ (version "0.8.9")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaWeb/HTTP.jl")
+ (commit (string-append "v" version))))
+ (file-name "HTTP")
+ (sha256
+ (base32 "11g49gnnacvmihnr0p3inqmsdw6wllyfkq5sbka09mwnrf3vahs7"))))
+ (build-system julia-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ (add-before 'install 'disable-network-tests
+ (lambda _
+ (substitute* "test/runtests.jl"
+ (("\"client.jl") "# \"client.jl")
+ (("\"multipart.jl") "# \"multipart.jl")
+ (("\"aws4.jl") "# \"as4.jl")
+ ;; some of those might still be saved
+ (("\"async.jl") "# \"async.jl")
+ (("\"server.jl") "# \"server.jl"))
+ (substitute* "test/websockets.jl"
+ (("for s in socket_type") "for s in []"))
+ (substitute* "test/messages.jl"
+ (("@testset \"Read methods\" ") "return\n"))
+ #t)))))
+ (propagated-inputs
+ `(("julia-inifile" ,julia-inifile)
+ ("julia-mbedtls" ,julia-mbedtls)
+ ("julia-compat" ,julia-compat)))
+ ;; required for tests
+ (inputs
+ `(("julia-json" ,julia-json)
+ ("julia-bufferedstreams" ,julia-bufferedstreams)))
+ (home-page "https://juliaweb.github.io/HTTP.jl/")
+ (synopsis "HTTP support for Julia")
+ (description "@code{HTTP.jl} is a Julia library for HTTP Messages,
+implementing both a client and a server.")
+ (license license:expat)))
+
(define-public julia-inifile
(package
(name "julia-inifile")
--
2.25.0
[-- Attachment #18: Type: text/plain, Size: 448 bytes --]
Thanks, Nicolò
>
> On Tue, 11 Feb 2020 at 18:58, zimoun <zimon.toutoune@gmail.com> wrote:
>>
>> Hi,
>>
>> Please find attach the almost updated julia using 2 patches. The first
>> add a dependency and the second update and patch.
>>
>> I hope that I do not screw up the indentation; sometimes my Emacs does
>> weird stuff. Anyway.
>>
>> If it is fine with you, please ping Ludo or any committer. :-)
>>
>>
>> Cheers,
>> simon
next prev parent reply other threads:[~2020-02-24 21:01 UTC|newest]
Thread overview: 54+ messages / expand[flat|nested] mbox.gz Atom feed top
[not found] <87pnfgvqgt.fsf@guixSD.i-did-not-set--mail-host-address--so-tickle-me>
2019-12-09 13:36 ` [bug#38546] [PATCH 0/3] Julia: fix package build and add julia-xyz nixo
2019-10-10 15:49 ` [bug#38546] [PATCH 2/3] gnu: julia-build-system: Enable tests Nicolò Balzarotti
2019-12-15 21:45 ` Ludovic Courtès
2019-10-10 15:49 ` [bug#38546] [PATCH 3/3] gnu: julia-xyz: Add julia-compat Nicolò Balzarotti
2019-12-15 21:46 ` Ludovic Courtès
2019-10-10 15:49 ` [bug#38546] [PATCH 1/3] gnu: julia: Set to JULIA_LOAD_PATH and JULIA_DEPOT_PATH variables Nicolò Balzarotti
2019-12-15 21:43 ` Ludovic Courtès
2019-12-12 8:43 ` [bug#38546] [PATCH 01/11] gnu: julia: Update to 1.3.1 nixo
2019-12-15 21:40 ` [bug#38546] [PATCH 0/3] Julia: fix package build and add julia-xyz Ludovic Courtès
2020-01-10 9:25 ` [bug#38546] [PATCH 03/11] gnu: julia: Adjust indentation nixo
2020-01-17 18:40 ` [bug#38546] [PATCH 05/11] gnu: build: julia-build-system: fix package nixo
2020-01-18 12:58 ` [bug#38546] [PATCH 02/11] gnu: julia: use SOURCE_DATE_EPOCH for precompilation timestamp nixo
2020-01-18 13:05 ` [bug#38546] [PATCH 06/11] gnu: Add julia-compat nixo
2020-01-18 13:06 ` [bug#38546] [PATCH 07/11] gnu: Add julia-inifile nixo
2020-01-18 13:07 ` [bug#38546] [PATCH 08/11] gnu: Add julia-sha nixo
2020-01-18 13:07 ` [bug#38546] [PATCH 09/11] gnu: Add julia-binaryprovider nixo
2020-01-18 13:11 ` [bug#38546] [PATCH 10/11] gnu: Add julia-mbedtls nixo
2020-01-18 13:11 ` [bug#38546] [PATCH 11/11] gnu: Add julia-http nixo
2020-01-18 13:23 ` [bug#38546] [PATCH 04/11] use wrapper to set JULIA_LOAD_PATH and JULIA_DEPOT_PATH nixo
2020-01-18 13:32 ` [bug#38546] [Nicolò Balzarotti] [PATCH 00/11] Update julia to 1.3.1, fix precompilation, add HTTP.jl Nicolò Balzarotti
2020-01-18 13:36 ` [bug#38546] [nixo] [PATCH 01/11] gnu: julia: Update to 1.3.1 Nicolò Balzarotti
2020-01-18 13:42 ` [bug#38546] [Nicolò Balzarotti] [PATCH 00/10] Update julia to 1.3.1, fix precompilation, add HTTP.jl Nicolò Balzarotti
2020-01-18 13:59 ` [bug#38546] [00/11] Update Julia, Fix " Nicolò Balzarotti
2020-01-20 18:49 ` zimoun
2020-01-21 13:45 ` Nicolò Balzarotti
2020-01-22 9:22 ` zimoun
2020-01-22 9:59 ` Nicolò Balzarotti
2020-01-24 17:26 ` zimoun
2020-02-04 18:03 ` zimoun
2020-02-07 12:06 ` zimoun
2020-02-11 14:51 ` zimoun
2020-02-11 15:10 ` Nicolò Balzarotti
2020-02-11 15:19 ` zimoun
2020-02-11 15:24 ` Nicolò Balzarotti
2020-01-18 14:35 ` [bug#38546] Julia patches v3 Nicolò Balzarotti
2020-02-11 17:58 ` [bug#38546] [PATCH v4] Update Julia 1.3.1: almost done zimoun
2020-02-24 12:50 ` zimoun
2020-02-24 20:59 ` Nicolò Balzarotti [this message]
2020-02-25 16:12 ` zimoun
2020-02-25 18:08 ` Nicolò Balzarotti
2020-02-26 12:32 ` [bug#38546] [PATCH v5] Julia: Update to 1.3.1 Nicolò Balzarotti
2020-03-16 10:06 ` Efraim Flashner
2020-03-17 7:51 ` Nicolò Balzarotti
2020-03-17 8:12 ` Efraim Flashner
2020-03-17 12:21 ` Marius Bakke
2020-03-17 13:37 ` Nicolò Balzarotti
2020-03-19 12:28 ` Marius Bakke
2020-04-06 6:09 ` Efraim Flashner
2020-04-06 8:18 ` Nicolò Balzarotti
2020-04-06 8:37 ` Efraim Flashner
2020-04-06 23:18 ` Nicolò Balzarotti
2020-04-07 5:41 ` Efraim Flashner
2020-04-07 6:05 ` Efraim Flashner
2020-04-07 14:35 ` bug#38546: " Efraim Flashner
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