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From: anothersms@gmail.com (Nicolò Balzarotti)
To: 38546@debbugs.gnu.org
Subject: [bug#38546] [Nicolò Balzarotti] [PATCH 00/11] Update julia to 1.3.1, fix precompilation, add HTTP.jl
Date: Sat, 18 Jan 2020 14:32:36 +0100	[thread overview]
Message-ID: <87sgkcvqiz.fsf@guixSD.i-did-not-set--mail-host-address--so-tickle-me> (raw)
In-Reply-To: <87v9qpvbyr.fsf@guixSD.i-did-not-set--mail-host-address--so-tickle-me>


Ok I had time to look at this again.

1. Package installation can be done both the julia way and the guix way
2. SOURCE_DATE_EPOCH is respected in package precompile timestamp. Other fixes are needed to get reproducible builds, but for now that means that package cache is used.
3. This patch adds some first julia package (HTTP.jl and dependencies) 
4. Updated julia to 1.3.1 (latest release). It's working great and the
build recipe is simplified a lot.  However, some test is failing.  The
"interesting" part is that when running tests alone, they are working.
It seems like the problem arise when tests are run on the _same core_
and not on different cores.  I opened a issue upstream for this
(https://github.com/JuliaLang/julia/issues/34330), I'll have to look
further on it, but for now if it's fine for me this is ready to be merged.

I'm sending the patch series here.

Thanks, Nicolò

Ludovic Courtès <ludo@gnu.org> writes:

> Hi,
>
> (+Cc: bug report.)
>
> Nicolò Balzarotti <anothersms@gmail.com> skribis:
>
>> Ludovic Courtès <ludo@gnu.org> writes:
>>
>>> Hi!
>>>
>>> nixo <anothersms@gmail.com> skribis:
>>>
>>>> This set of patches improve the state of julia-build-system.
>>>>
>>>> 1. set path JULIA_LOAD_PATH to enable installing packages, and
>>>>   JULIA_DEPOT_PATH to allow guix-precompiled cache to be recognized by julia. To
>>>
>>> These two environment variables are supported upstream, right?
>>
>> Yes, those variables are documented here:
>> https://docs.julialang.org/en/v1/manual/environment-variables/index.html
>
> Great.
>
>> Should user be allowed to manually install packages in his own private
>> home folder manually? (I just tried with R: R recognize the store is RO
>> and ask for an alternative path). I'll try to allow "standard" package
>> installation and submit the patch again (also, I just read you other
>> comments, so I'll fix everything!)
>
> I think users should have the option to install packages in the normal
> Julia way, without Guix.
>
>>>>   do this, a small "hack" with libfaketime was required (julia decides if the
>>>>   cache is valid by comparing source ".jl" mtime with cache ".ji" file, in which
>>>>   julia stores a timestamp. We need to force this timestamp to be equal to the
>>>>   mtime of guix-store files).
>>>
>>> OK.  This hack shouldn’t break “normal” Julia uses (outside of the
>>> store), right?
>> You are right, the issue is that julia finds its src (.jl) file to have
>> a different (although older) timestamp (because guix fixes the
>> mtime). This applies only to cache files placed in the store. Other
>> cache files (non-guix installed files) have the right timestamp, so are
>> not affected (I don't know if this explanation is clear. The TLDR is:
>> with this hack store works without double-precompilation, non-store
>> works normally, too).
>> However, I'll check if I can make it work with SOURCE_DATE_EPOCH. I
>> already read the code responsible for precompilation, so hopefully it
>> won't take too much time
>
> Awesome, thanks!
>
> Ludo’.

  parent reply	other threads:[~2020-01-18 13:33 UTC|newest]

Thread overview: 54+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
     [not found] <87pnfgvqgt.fsf@guixSD.i-did-not-set--mail-host-address--so-tickle-me>
2019-12-09 13:36 ` [bug#38546] [PATCH 0/3] Julia: fix package build and add julia-xyz nixo
2019-10-10 15:49   ` [bug#38546] [PATCH 3/3] gnu: julia-xyz: Add julia-compat Nicolò Balzarotti
2019-12-15 21:46     ` Ludovic Courtès
2019-10-10 15:49   ` [bug#38546] [PATCH 2/3] gnu: julia-build-system: Enable tests Nicolò Balzarotti
2019-12-15 21:45     ` Ludovic Courtès
2019-10-10 15:49   ` [bug#38546] [PATCH 1/3] gnu: julia: Set to JULIA_LOAD_PATH and JULIA_DEPOT_PATH variables Nicolò Balzarotti
2019-12-15 21:43     ` Ludovic Courtès
2019-12-12  8:43   ` [bug#38546] [PATCH 01/11] gnu: julia: Update to 1.3.1 nixo
2019-12-15 21:40   ` [bug#38546] [PATCH 0/3] Julia: fix package build and add julia-xyz Ludovic Courtès
2020-01-10  9:25   ` [bug#38546] [PATCH 03/11] gnu: julia: Adjust indentation nixo
2020-01-17 18:40   ` [bug#38546] [PATCH 05/11] gnu: build: julia-build-system: fix package nixo
2020-01-18 12:58   ` [bug#38546] [PATCH 02/11] gnu: julia: use SOURCE_DATE_EPOCH for precompilation timestamp nixo
2020-01-18 13:05   ` [bug#38546] [PATCH 06/11] gnu: Add julia-compat nixo
2020-01-18 13:06   ` [bug#38546] [PATCH 07/11] gnu: Add julia-inifile nixo
2020-01-18 13:07   ` [bug#38546] [PATCH 08/11] gnu: Add julia-sha nixo
2020-01-18 13:07   ` [bug#38546] [PATCH 09/11] gnu: Add julia-binaryprovider nixo
2020-01-18 13:11   ` [bug#38546] [PATCH 10/11] gnu: Add julia-mbedtls nixo
2020-01-18 13:11   ` [bug#38546] [PATCH 11/11] gnu: Add julia-http nixo
2020-01-18 13:23   ` [bug#38546] [PATCH 04/11] use wrapper to set JULIA_LOAD_PATH and JULIA_DEPOT_PATH nixo
2020-01-18 13:32   ` Nicolò Balzarotti [this message]
2020-01-18 13:36   ` [bug#38546] [nixo] [PATCH 01/11] gnu: julia: Update to 1.3.1 Nicolò Balzarotti
2020-01-18 13:42   ` [bug#38546] [Nicolò Balzarotti] [PATCH 00/10] Update julia to 1.3.1, fix precompilation, add HTTP.jl Nicolò Balzarotti
2020-01-18 13:59   ` [bug#38546] [00/11] Update Julia, Fix " Nicolò Balzarotti
2020-01-20 18:49     ` zimoun
2020-01-21 13:45       ` Nicolò Balzarotti
2020-01-22  9:22         ` zimoun
2020-01-22  9:59           ` Nicolò Balzarotti
2020-01-24 17:26             ` zimoun
2020-02-04 18:03               ` zimoun
2020-02-07 12:06                 ` zimoun
2020-02-11 14:51                 ` zimoun
2020-02-11 15:10                   ` Nicolò Balzarotti
2020-02-11 15:19                     ` zimoun
2020-02-11 15:24                       ` Nicolò Balzarotti
2020-01-18 14:35   ` [bug#38546] Julia patches v3 Nicolò Balzarotti
2020-02-11 17:58   ` [bug#38546] [PATCH v4] Update Julia 1.3.1: almost done zimoun
2020-02-24 12:50     ` zimoun
2020-02-24 20:59       ` Nicolò Balzarotti
2020-02-25 16:12         ` zimoun
2020-02-25 18:08           ` Nicolò Balzarotti
2020-02-26 12:32             ` [bug#38546] [PATCH v5] Julia: Update to 1.3.1 Nicolò Balzarotti
2020-03-16 10:06               ` Efraim Flashner
2020-03-17  7:51                 ` Nicolò Balzarotti
2020-03-17  8:12                   ` Efraim Flashner
2020-03-17 12:21                     ` Marius Bakke
2020-03-17 13:37                       ` Nicolò Balzarotti
2020-03-19 12:28                         ` Marius Bakke
2020-04-06  6:09                           ` Efraim Flashner
2020-04-06  8:18                             ` Nicolò Balzarotti
2020-04-06  8:37                               ` Efraim Flashner
2020-04-06 23:18                                 ` Nicolò Balzarotti
2020-04-07  5:41                                   ` Efraim Flashner
2020-04-07  6:05                                     ` Efraim Flashner
2020-04-07 14:35                                   ` bug#38546: " Efraim Flashner

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