From: zimoun <zimon.toutoune@gmail.com>
To: 53349@debbugs.gnu.org
Cc: zimoun <zimon.toutoune@gmail.com>
Subject: [bug#53349] [PATCH 3/9] gnu: Add r-hgu133plus2-db.
Date: Tue, 18 Jan 2022 18:54:12 +0100 [thread overview]
Message-ID: <20220118175418.1559782-3-zimon.toutoune@gmail.com> (raw)
In-Reply-To: <20220118175418.1559782-1-zimon.toutoune@gmail.com>
* gnu/packages/bioconductor.scm (r-hgu133plus2-db): New variable.
---
gnu/packages/bioconductor.scm | 20 ++++++++++++++++++++
1 file changed, 20 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 935c958cd0..aece88ab5b 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -956,6 +956,26 @@ (define-public r-do-db
Disease Ontology.")
(license license:artistic2.0)))
+(define-public r-hgu133plus2-db
+ (package
+ (name "r-hgu133plus2-db")
+ (version "3.13.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "hgu133plus2.db" version 'annotation))
+ (sha256
+ (base32 "0i6cfk7ahql4fcgrq0dai9gkjbsahyzd9iv4lqv1ad58fzkmipnx"))))
+ (properties `((upstream-name . "hgu133plus2.db")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-annotationdbi r-org-hs-eg-db))
+ (home-page "https://bioconductor.org/packages/hgu133plus2.db")
+ (synopsis "Affymetrix Affymetrix HG-U133_Plus_2 Array annotation data")
+ (description
+ "This package provides Affymetrix HG-U133_Plus_2 array annotation
+data (chip hgu133plus2) assembled using data from public repositories.")
+ (license license:artistic2.0)))
+
(define-public r-pfam-db
(package
(name "r-pfam-db")
--
2.34.0
next prev parent reply other threads:[~2022-01-18 17:55 UTC|newest]
Thread overview: 12+ messages / expand[flat|nested] mbox.gz Atom feed top
2022-01-18 17:51 [bug#53349] [PATCH 0/9] Add 2 bioinformatics R packages zimoun
2022-01-18 17:54 ` [bug#53349] [PATCH 1/9] gnu: r-org-dr-eg-db: Update to 3.14.0 zimoun
2022-01-18 17:54 ` [bug#53349] [PATCH 2/9] gnu: Add r-jetset zimoun
2022-01-18 17:54 ` zimoun [this message]
2022-01-18 17:54 ` [bug#53349] [PATCH 4/9] gnu: Add r-chorddiag zimoun
2022-01-18 17:54 ` [bug#53349] [PATCH 5/9] gnu: Add r-scico zimoun
2022-01-18 17:54 ` [bug#53349] [PATCH 6/9] gnu: Add r-add2ggplot zimoun
2022-01-18 17:54 ` [bug#53349] [PATCH 7/9] gnu: Add r-rlist zimoun
2022-01-18 17:54 ` [bug#53349] [PATCH 8/9] gnu: Add r-icellnet zimoun
2022-01-18 17:54 ` [bug#53349] [PATCH 9/9] gnu: Add r-scseqcomm zimoun
2022-01-21 13:58 ` bug#53349: [PATCH 0/9] Add 2 bioinformatics R packages Ricardo Wurmus
2022-01-24 14:08 ` [bug#53349] " zimoun
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