all messages for Guix-related lists mirrored at yhetil.org
 help / color / mirror / code / Atom feed
From: zimoun <zimon.toutoune@gmail.com>
To: 47010@debbugs.gnu.org
Cc: zimoun <zimon.toutoune@gmail.com>
Subject: [bug#47010] [PATCH 05/10] gnu: r-rbgl: Move to (gnu packages bioconductor).
Date: Mon,  8 Mar 2021 18:57:58 +0100	[thread overview]
Message-ID: <20210308175802.62517-5-zimon.toutoune@gmail.com> (raw)
In-Reply-To: <20210308175802.62517-1-zimon.toutoune@gmail.com>

* gnu/packages/bioinformatics.scm (r-rbgl): Move from here...
* gnu/packages/bioconductor.scm (r-rbgl): ...to here.
---
 gnu/packages/bioconductor.scm   | 23 +++++++++++++++++++++++
 gnu/packages/bioinformatics.scm | 23 -----------------------
 2 files changed, 23 insertions(+), 23 deletions(-)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 706b87b207..0a9dc4f9ba 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1650,6 +1650,29 @@ high-throughput sequencing experiments.")
 the Human Protein Atlas project.")
     (license license:artistic2.0)))
 
+(define-public r-rbgl
+  (package
+    (name "r-rbgl")
+    (version "1.66.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "RBGL" version))
+       (sha256
+        (base32
+         "016vyzgixb3gjpzi21rbs6ngnnqcxr77krwjjf1ldnzzj8vqrqsz"))))
+    (properties `((upstream-name . "RBGL")))
+    (build-system r-build-system)
+    (propagated-inputs
+     `(("r-bh" ,r-bh)
+       ("r-graph" ,r-graph)))
+    (home-page "https://www.bioconductor.org/packages/RBGL")
+    (synopsis "Interface to the Boost graph library")
+    (description
+     "This package provides a fairly extensive and comprehensive interface to
+the graph algorithms contained in the Boost library.")
+    (license license:artistic2.0)))
+
 (define-public r-regioner
   (package
     (name "r-regioner")
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 3212641af9..0f96ffc02e 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -7385,29 +7385,6 @@ includes software to
 ")
       (license license:cc0))))
 
-(define-public r-rbgl
-  (package
-    (name "r-rbgl")
-    (version "1.66.0")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (bioconductor-uri "RBGL" version))
-       (sha256
-        (base32
-         "016vyzgixb3gjpzi21rbs6ngnnqcxr77krwjjf1ldnzzj8vqrqsz"))))
-    (properties `((upstream-name . "RBGL")))
-    (build-system r-build-system)
-    (propagated-inputs
-     `(("r-bh" ,r-bh)
-       ("r-graph" ,r-graph)))
-    (home-page "https://www.bioconductor.org/packages/RBGL")
-    (synopsis "Interface to the Boost graph library")
-    (description
-     "This package provides a fairly extensive and comprehensive interface to
-the graph algorithms contained in the Boost library.")
-    (license license:artistic2.0)))
-
 (define-public r-gseabase
   (package
     (name "r-gseabase")
-- 
2.30.1





  parent reply	other threads:[~2021-03-08 18:21 UTC|newest]

Thread overview: 12+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2021-03-08 17:55 [bug#47010] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor) zimoun
2021-03-08 17:57 ` [bug#47010] [PATCH 01/10] gnu: r-genefilter: Move " zimoun
2021-03-08 17:57   ` [bug#47010] [PATCH 02/10] gnu: r-deseq2: " zimoun
2021-03-08 17:57   ` [bug#47010] [PATCH 03/10] gnu: r-dexseq: " zimoun
2021-03-08 17:57   ` [bug#47010] [PATCH 04/10] gnu: r-annotationforge: " zimoun
2021-03-08 17:57   ` zimoun [this message]
2021-03-08 17:57   ` [bug#47010] [PATCH 06/10] gnu: r-gseabase: " zimoun
2021-03-08 17:58   ` [bug#47010] [PATCH 07/10] gnu: r-category: " zimoun
2021-03-08 17:58   ` [bug#47010] [PATCH 08/10] gnu: r-gostats: " zimoun
2021-03-08 17:58   ` [bug#47010] [PATCH 09/10] gnu: r-shortread: " zimoun
2021-03-08 17:58 ` [bug#47010] [PATCH 10/10] gnu: r-systempiper: " zimoun
2021-03-12 13:54 ` bug#47010: [PATCH 00/10] Move some Bioconductor packages " Ricardo Wurmus

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=20210308175802.62517-5-zimon.toutoune@gmail.com \
    --to=zimon.toutoune@gmail.com \
    --cc=47010@debbugs.gnu.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this external index

	https://git.savannah.gnu.org/cgit/guix.git

This is an external index of several public inboxes,
see mirroring instructions on how to clone and mirror
all data and code used by this external index.