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From: Ricardo Wurmus <rekado@elephly.net>
To: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
Cc: 60997@debbugs.gnu.org
Subject: [bug#60997] [PATCH 3/4] gnu: Add python-phylophlan.
Date: Tue, 24 Jan 2023 10:10:20 +0100	[thread overview]
Message-ID: <87h6wge1q7.fsf@elephly.net> (raw)
In-Reply-To: <20230122004951.119277-3-madalinionel.patrascu@mdc-berlin.de>


Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:

> +    (build-system python-build-system)

Please use pyproject-build-system where possible.

> +    (arguments
> +     (list
> +      #:tests? #f ;pypi no tests

There are no tests, nothing to do with pypi.

> +      #:phases
> +      #~(modify-phases %standard-phases
> +          ;;pypi does not provide the readme.md file
> +          (add-before 'build 'loose-readme-file-requirement
> +           (lambda _
> +              (substitute* "setup.py"
> +                (("long_description")
> +                  "#long_description")))))))

I changed this to just fetch the source from git.

> +    (propagated-inputs
> +     (list python-biopython

This will become a problem down the line when combined with cmseq.

-- 
Ricardo




  reply	other threads:[~2023-01-24  9:12 UTC|newest]

Thread overview: 8+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-01-22  0:44 [bug#60997] [patch] gnu: Add python-cmseq, python-cmseq, python-phylophlan and python-metaphlan MadalinIonel.Patrascu
2023-01-22  0:49 ` [bug#60997] [PATCH 1/4] gnu: Add python-cmseq Mădălin Ionel Patrașcu
2023-01-22  0:49   ` [bug#60997] [PATCH 2/4] gnu: Add python-hclust2 Mădălin Ionel Patrașcu
2023-01-22  0:49   ` [bug#60997] [PATCH 3/4] gnu: Add python-phylophlan Mădălin Ionel Patrașcu
2023-01-24  9:10     ` Ricardo Wurmus [this message]
2023-01-22  0:49   ` [bug#60997] [PATCH 4/4] gnu: Add python-metaphlan Mădălin Ionel Patrașcu
2023-01-24  9:11     ` Ricardo Wurmus
2023-01-24  8:36   ` [bug#60997] [PATCH 1/4] gnu: Add python-cmseq Ricardo Wurmus

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