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From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <62428@debbugs.gnu.org.>
Subject: [bug#62428] [PATCH 10/14] gnu: Add r-arrayquality.
Date: Sat, 25 Mar 2023 00:18:56 +0100	[thread overview]
Message-ID: <20230324231900.28367-10-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <20230324231900.28367-1-madalinionel.patrascu@mdc-berlin.de>

* gnu/packages/bioconductor.scm (r-arrayquality): New variable.
---
 gnu/packages/bioconductor.scm | 25 +++++++++++++++++++++++++
 1 file changed, 25 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 62cd786842..7a904d3d08 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -3251,6 +3251,31 @@ (define-public r-arraymvout
 error rate.")
     (license license:artistic2.0)))
 
+(define-public r-arrayquality
+  (package
+    (name "r-arrayquality")
+    (version "1.76.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "arrayQuality" version))
+       (sha256
+        (base32 "0b5q71bpl9ln26622jvchd4f9i4kwayqkm9b75yj0a69imbfcn4s"))))
+    (properties `((upstream-name . "arrayQuality")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-gridbase
+           r-hexbin
+           r-limma
+           r-marray
+           r-rcolorbrewer))
+    (home-page "http://arrays.ucsf.edu/")
+    (synopsis "Assessing array quality on spotted arrays")
+    (description
+     "This package provides functions for performing print-run and array level
+quality assessment.")
+    (license license:lgpl2.0+)))
+
 (define-public r-asafe
   (package
     (name "r-asafe")
-- 
2.39.2





  parent reply	other threads:[~2023-03-24 23:21 UTC|newest]

Thread overview: 16+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-03-24 22:25 [bug#62428] gnu: Add r-anota2seq, r-hybridmtest, r-apalyzer, r-org-sc-sgd-db, r-apcomplex, r-mdqc, , r-parody, r-arraymvout, r-arrayquality, r-beaddatapackr, r-beadarray, r-arrayqualitymetrics, r-repmis, r-setrng Mădălin Ionel Patrașcu
2023-03-24 23:18 ` [bug#62428] [PATCH 01/14] gnu: Add r-anota2seq Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 02/14] gnu: Add r-repmis Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 03/14] gnu: Add r-hybridmtest Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 05/14] gnu: Add r-org-sc-sgd-db Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 06/14] gnu: Add r-apcomplex Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 07/14] gnu: Add r-mdqc Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 08/14] gnu: Add r-parody Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 09/14] gnu: Add r-arraymvout Mădălin Ionel Patrașcu
2023-03-24 23:18   ` Mădălin Ionel Patrașcu [this message]
2023-03-24 23:18   ` [bug#62428] [PATCH 11/14] gnu: Add r-setrng Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 12/14] gnu: Add r-beaddatapackr Mădălin Ionel Patrașcu
2023-03-24 23:18   ` [bug#62428] [PATCH 13/14] gnu: Add r-beadarray Mădălin Ionel Patrașcu
2023-03-24 23:19   ` [bug#62428] [PATCH 14/14] gnu: Add r-arrayqualitymetrics Mădălin Ionel Patrașcu
2023-10-04  9:06 ` bug#62428: gnu: Add r-anota2seq … Ricardo Wurmus

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