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From: zimoun <zimon.toutoune@gmail.com>
To: 43345@debbugs.gnu.org
Cc: zimoun <zimon.toutoune@gmail.com>
Subject: [bug#43345] [PATCH 07/12] gnu: r-seqminer: Move to (gnu packages cran).
Date: Fri, 11 Sep 2020 20:08:44 +0200	[thread overview]
Message-ID: <20200911180849.12582-7-zimon.toutoune@gmail.com> (raw)
In-Reply-To: <20200911180849.12582-1-zimon.toutoune@gmail.com>

* gnu/packages/bioinformatics.scm (r-seqminer): Move from here ...
* gnu/packages/cran.scm (r-seqminer): ... to here.
---
 gnu/packages/bioinformatics.scm | 22 ----------------------
 gnu/packages/cran.scm           | 22 ++++++++++++++++++++++
 2 files changed, 22 insertions(+), 22 deletions(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 4de52f3aaa..40c6363859 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -9393,28 +9393,6 @@ imaging data that can be used in subsequent analyses to adjust for unknown,
 unmodeled, or latent sources of noise.")
     (license license:artistic2.0)))
 
-(define-public r-seqminer
-  (package
-    (name "r-seqminer")
-    (version "8.0")
-    (source
-     (origin
-       (method url-fetch)
-       (uri (cran-uri "seqminer" version))
-       (sha256
-        (base32
-         "00jzj8mwb0zaiwlifd41b26mrq9mzigj18nc29dydi0r42hxg16i"))))
-    (build-system r-build-system)
-    (inputs
-     `(("zlib" ,zlib)))
-    (home-page "http://seqminer.genomic.codes")
-    (synopsis "Read nucleotide sequence data (VCF, BCF, and METAL formats)")
-    (description
-     "This package provides tools to integrate nucleotide sequencing
-data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
-    ;; Any version of the GPL is acceptable
-    (license (list license:gpl2+ license:gpl3+))))
-
 (define-public r-raremetals2
   (package
     (name "r-raremetals2")
diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index bd36e1bacb..5d1e248cc4 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -23754,3 +23754,25 @@ Locus} (QTL) analysis in experimental crosses.  It is a reimplementation of the
 @code{R/qtl} package to better handle high-dimensional data and complex cross
 designs.  Broman et al. (2018) <doi:10.1534/genetics.118.301595>.")
     (license license:gpl3)))
+
+(define-public r-seqminer
+  (package
+    (name "r-seqminer")
+    (version "8.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (cran-uri "seqminer" version))
+       (sha256
+        (base32
+         "00jzj8mwb0zaiwlifd41b26mrq9mzigj18nc29dydi0r42hxg16i"))))
+    (build-system r-build-system)
+    (inputs
+     `(("zlib" ,zlib)))
+    (home-page "http://seqminer.genomic.codes")
+    (synopsis "Read nucleotide sequence data (VCF, BCF, and METAL formats)")
+    (description
+     "This package provides tools to integrate nucleotide sequencing
+data (variant call format, e.g. VCF or BCF) or meta-analysis results in R.")
+    ;; Any version of the GPL is acceptable
+    (license (list license:gpl2+ license:gpl3+))))
-- 
2.28.0





  parent reply	other threads:[~2020-09-11 18:12 UTC|newest]

Thread overview: 14+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2020-09-11 18:05 [bug#43345] [PATCH 00/12] Move some CRAN packages to (gnu packages cran) zimoun
2020-09-11 18:08 ` [bug#43345] [PATCH 01/12] gnu: r-codedepends: Comment why is in bioconductor.scm zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 02/12] gnu: r-adaptivesparsity: Move to (gnu packages cran) zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 03/12] gnu: r-diffusionmap: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 04/12] gnu: r-igraph: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 05/12] gnu: r-qtl: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 06/12] gnu: r-qtl2: " zimoun
2020-09-11 18:08   ` zimoun [this message]
2020-09-11 18:08   ` [bug#43345] [PATCH 08/12] gnu: r-maldiquant: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 09/12] gnu: r-seurat: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 11/12] gnu: r-diversitree: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 12/12] gnu: r-absfiltergsea: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 10/12] gnu: r-phangorn: " zimoun
2020-09-11 20:07 ` bug#43345: [PATCH 00/12] Move some CRAN packages " Ricardo Wurmus

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