unofficial mirror of guix-patches@gnu.org 
 help / color / mirror / code / Atom feed
From: zimoun <zimon.toutoune@gmail.com>
To: 43345@debbugs.gnu.org
Cc: zimoun <zimon.toutoune@gmail.com>
Subject: [bug#43345] [PATCH 02/12] gnu: r-adaptivesparsity: Move to (gnu packages cran).
Date: Fri, 11 Sep 2020 20:08:39 +0200	[thread overview]
Message-ID: <20200911180849.12582-2-zimon.toutoune@gmail.com> (raw)
In-Reply-To: <20200911180849.12582-1-zimon.toutoune@gmail.com>

* gnu/packages/machine-learning.scm (r-adaptivesparsity): Move from here...
* gnu/packages/cran.scm (r-adaptivesparsity): ...to here.
---
 gnu/packages/cran.scm             | 36 +++++++++++++++++++++++++++++++
 gnu/packages/machine-learning.scm | 35 ------------------------------
 2 files changed, 36 insertions(+), 35 deletions(-)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index de4273892d..f701b7fde0 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -23607,3 +23607,39 @@ environments (e.g.  development, test, production).  It reads values using a
 function that determines the current environment and returns the appropriate
 value.")
     (license license:gpl3)))
+
+(define-public r-adaptivesparsity
+  (package
+    (name "r-adaptivesparsity")
+    (version "1.6")
+    (source (origin
+              (method url-fetch)
+              (uri (cran-uri "AdaptiveSparsity" version))
+              (sha256
+               (base32
+                "0imr5m8mll9j6n4icsv6z9rl5kbnwsp9wvzrg7n90nnmcxq2cz91"))))
+    (properties
+     `((upstream-name . "AdaptiveSparsity")))
+    (build-system r-build-system)
+    (arguments
+     `(#:phases
+       (modify-phases %standard-phases
+         (add-after 'unpack 'link-against-armadillo
+           (lambda _
+             (substitute* "src/Makevars"
+               (("PKG_LIBS=" prefix)
+                (string-append prefix "-larmadillo"))))))))
+    (propagated-inputs
+     `(("r-mass" ,r-mass)
+       ("r-matrix" ,r-matrix)
+       ("r-rcpp" ,r-rcpp)
+       ("r-rcpparmadillo" ,r-rcpparmadillo)))
+    (inputs
+     `(("armadillo" ,armadillo)))
+    (home-page "https://cran.r-project.org/web/packages/AdaptiveSparsity")
+    (synopsis "Adaptive sparsity models")
+    (description
+     "This package implements the Figueiredo machine learning algorithm for
+adaptive sparsity and the Wong algorithm for adaptively sparse gaussian
+geometric models.")
+    (license license:lgpl3+)))
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index 05646dd770..0301b4964a 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -660,41 +660,6 @@ synchronization, thread-safety, concurrent data structures, and non-blocking
 I/O.")
     (license license:asl2.0)))
 
-(define-public r-adaptivesparsity
-  (package
-    (name "r-adaptivesparsity")
-    (version "1.6")
-    (source (origin
-              (method url-fetch)
-              (uri (cran-uri "AdaptiveSparsity" version))
-              (sha256
-               (base32
-                "0imr5m8mll9j6n4icsv6z9rl5kbnwsp9wvzrg7n90nnmcxq2cz91"))))
-    (properties
-     `((upstream-name . "AdaptiveSparsity")))
-    (build-system r-build-system)
-    (arguments
-     `(#:phases
-       (modify-phases %standard-phases
-         (add-after 'unpack 'link-against-armadillo
-           (lambda _
-             (substitute* "src/Makevars"
-               (("PKG_LIBS=" prefix)
-                (string-append prefix "-larmadillo"))))))))
-    (propagated-inputs
-     `(("r-mass" ,r-mass)
-       ("r-matrix" ,r-matrix)
-       ("r-rcpp" ,r-rcpp)
-       ("r-rcpparmadillo" ,r-rcpparmadillo)))
-    (inputs
-     `(("armadillo" ,armadillo)))
-    (home-page "https://cran.r-project.org/web/packages/AdaptiveSparsity")
-    (synopsis "Adaptive sparsity models")
-    (description
-     "This package implements the Figueiredo machine learning algorithm for
-adaptive sparsity and the Wong algorithm for adaptively sparse gaussian
-geometric models.")
-    (license license:lgpl3+)))
 
 (define-public gemmlowp-for-tensorflow
   ;; The commit hash is taken from "tensorflow/workspace.bzl".
-- 
2.28.0





  reply	other threads:[~2020-09-11 18:17 UTC|newest]

Thread overview: 14+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2020-09-11 18:05 [bug#43345] [PATCH 00/12] Move some CRAN packages to (gnu packages cran) zimoun
2020-09-11 18:08 ` [bug#43345] [PATCH 01/12] gnu: r-codedepends: Comment why is in bioconductor.scm zimoun
2020-09-11 18:08   ` zimoun [this message]
2020-09-11 18:08   ` [bug#43345] [PATCH 03/12] gnu: r-diffusionmap: Move to (gnu packages cran) zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 04/12] gnu: r-igraph: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 05/12] gnu: r-qtl: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 06/12] gnu: r-qtl2: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 07/12] gnu: r-seqminer: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 08/12] gnu: r-maldiquant: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 09/12] gnu: r-seurat: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 11/12] gnu: r-diversitree: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 12/12] gnu: r-absfiltergsea: " zimoun
2020-09-11 18:08   ` [bug#43345] [PATCH 10/12] gnu: r-phangorn: " zimoun
2020-09-11 20:07 ` bug#43345: [PATCH 00/12] Move some CRAN packages " Ricardo Wurmus

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://guix.gnu.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=20200911180849.12582-2-zimon.toutoune@gmail.com \
    --to=zimon.toutoune@gmail.com \
    --cc=43345@debbugs.gnu.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/guix.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).