* [bug#64438] [PATCH] gnu: Add python-gatspy.
@ 2023-07-03 15:08 Navid Afkhami
2023-07-03 15:46 ` bug#64438: " Ricardo Wurmus
0 siblings, 1 reply; 2+ messages in thread
From: Navid Afkhami @ 2023-07-03 15:08 UTC (permalink / raw)
To: 64438; +Cc: Navid Afkhami
* gnu/packages/bioinformatics.scm (python-gatspy): New variable.
---
gnu/packages/bioinformatics.scm | 28 ++++++++++++++++++++++++++++
1 file changed, 28 insertions(+)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index 0f3f64b98f..47ea11fa53 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -3477,6 +3477,34 @@ (define-public python-pysam
also includes an interface for tabix.")
(license license:expat)))
+(define-public python-gatspy
+ (package
+ (name "python-gatspy")
+ (version "0.3")
+ (source (origin
+ (method url-fetch)
+ (uri (pypi-uri "gatspy" version))
+ (sha256
+ (base32
+ "1gw2z6x8nikvnw2gkdl70gr81cwczd1pd7v8ry2kjn6k4kssrfav"))))
+ (build-system pyproject-build-system)
+ (arguments
+ (list #:test-flags '(list "-k"
+ ;; These tests require internet access
+ (string-append "not test_download_data.py"
+ " and not test_rrlyrae.py"
+ " and not test_rrlyrae_lightcurves"
+ " and not test_rrlyrae_generated.py"
+ " and not test_lomb_scargle.py"
+ " and not test_supersmoother.py"
+ " and not test_templates.py"))))
+ (propagated-inputs (list python-numpy python-scipy))
+ (native-inputs (list python-pytest python-nose python-setuptools-scm))
+ (home-page "https://github.com/astroml/gatspy")
+ (synopsis "General tools for astronomical time series in Python")
+ (description "General tools for astronomical time series in Python")
+ (license license:bsd-2)))
+
(define-public python-twobitreader
(package
(name "python-twobitreader")
base-commit: 29ccd7cac93da290e1d0466a1d33748ad4ccbf08
prerequisite-patch-id: 2e072dec7e75b2dcc08789c562b9c3f8491fc05f
--
2.34.1
^ permalink raw reply related [flat|nested] 2+ messages in thread
* bug#64438: [PATCH] gnu: Add python-gatspy.
2023-07-03 15:08 [bug#64438] [PATCH] gnu: Add python-gatspy Navid Afkhami
@ 2023-07-03 15:46 ` Ricardo Wurmus
0 siblings, 0 replies; 2+ messages in thread
From: Ricardo Wurmus @ 2023-07-03 15:46 UTC (permalink / raw)
To: 64438-done
Thanks for the patch!
I noticed that some of the tests only failed because we didn’t have
astroML. So I packaged it and added it to the inputs, so now only two
tests are disabled.
Pushed it to the master branch with commit
07f083e94f4f5c5f53e4d8aa644de2064a6256c9.
--
Ricardo
^ permalink raw reply [flat|nested] 2+ messages in thread
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2023-07-03 15:08 [bug#64438] [PATCH] gnu: Add python-gatspy Navid Afkhami
2023-07-03 15:46 ` bug#64438: " Ricardo Wurmus
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