From: "Ludovic Courtès" <ludovic.courtes@inria.fr>
To: "Paul A. Patience" <paul@apatience.com>
Cc: 55170@debbugs.gnu.org
Subject: [bug#55170] [PATCH 0/5] gnu: dealii: Add SUNDIALS dependency and update to 9.3.3.
Date: Fri, 29 Apr 2022 14:02:27 +0200 [thread overview]
Message-ID: <87tuac85d8.fsf@inria.fr> (raw)
In-Reply-To: <20220428181532.281677-1-paul@apatience.com> (Paul A. Patience's message of "Thu, 28 Apr 2022 18:15:39 +0000")
Hello,
"Paul A. Patience" <paul@apatience.com> skribis:
> This patch series must be applied on top of the v2 patches in bug#50080 [1].
> It adds SUNDIALS to deal.II's dependencies and updates deal.II to the latest
> version.
Awesome.
> Unfortunately, and as I mentioned in bug#50080 [1], I cannot get Trilinos to
> compile, even though it doesn't seem to have changed since commit
> 06c11434c9288bc70ba958227d47d31d5e46eda7, which added the
> trilinos-for-dealii-openmpi package.
> Non-MPI deal.II compiles fine with this patch series.
>
> In other words, this patch series is probably fine to push, but we still need
> to address Trilinos's failing build.
>
> I would appreciate it if anyone (Ludovic?) could try building dealii-openmpi
> (and therefore trilinos-for-dealii-openmpi) with this patch series applied, to
> check if the problem is only on my end or not.
>
> [1]: https://debbugs.gnu.org/cgi/bugreport.cgi?bug=50080
For me ‘sundials-openmpi-5.8.0’ fails like this:
--8<---------------cut here---------------start------------->8---
-- CXX standard set to 11
Appending C RELWITHDEBINFO flags
Appending CXX RELWITHDEBINFO flags
Appending Fortran RELWITHDEBINFO flags
-- Could NOT find MPI_C (missing: MPI_C_LIB_NAMES MPI_C_HEADER_DIR MPI_C_WORKS) (Required is at least version "2.0.0")
-- Could NOT find MPI_CXX (missing: MPI_CXX_LIB_NAMES MPI_CXX_HEADER_DIR MPI_CXX_WORKS) (Required is at least version "2.0.0")
-- Could NOT find MPI_Fortran (missing: MPI_Fortran_LIB_NAMES MPI_Fortran_F77_HEADER_DIR MPI_Fortran_MODULE_DIR MPI_Fortran_WORKS) (Required is at least version "2.0.0")
CMake Error at /gnu/store/zga679c4nldah9l8dhd5a4hdy820hcyf-cmake-minimal-3.21.4/share/cmake-3.21/Modules/FindPackageHandleStandardArgs.cmake:230 (message):
Could NOT find MPI (missing: MPI_C_FOUND MPI_CXX_FOUND MPI_Fortran_FOUND)
(Required is at least version "2.0.0")
Call Stack (most recent call first):
/gnu/store/zga679c4nldah9l8dhd5a4hdy820hcyf-cmake-minimal-3.21.4/share/cmake-3.21/Modules/FindPackageHandleStandardArgs.cmake:594 (_FPHSA_FAILURE_MESSAGE)
/gnu/store/zga679c4nldah9l8dhd5a4hdy820hcyf-cmake-minimal-3.21.4/share/cmake-3.21/Modules/FindMPI.cmake:1748 (find_package_handle_standard_args)
cmake/tpl/SundialsMPI.cmake:71 (find_package)
cmake/SundialsSetupTPLs.cmake:22 (include)
CMakeLists.txt:168 (include)
-- Configuring incomplete, errors occurred!
See also "/tmp/guix-build-sundials-openmpi-5.8.0.drv-0/build/CMakeFiles/CMakeOutput.log".
See also "/tmp/guix-build-sundials-openmpi-5.8.0.drv-0/build/CMakeFiles/CMakeError.log".
error: in phase 'configure': uncaught exception:
%exception #<&invoke-error program: "cmake" arguments: ("../sundials-5.8.0" "-DCMAKE_BUILD_TYPE=RelWithDebInfo" "-DCMAKE_INSTALL_PREFIX=/gnu/store/95ax5rqb6k1rkfii2i2nnbjfazr58zvi-sundials-openmpi-5.8.0" "-DCMAKE_INSTALL_LIBDIR=lib" "-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE" "-DCMAKE_INSTALL_RPATH=/gnu/store/95ax5rqb6k1rkfii2i2nnbjfazr58zvi-sundials-openmpi-5.8.0/lib" "-DCMAKE_VERBOSE_MAKEFILE=ON" "-DENABLE_MPI:BOOL=ON" "-DCMAKE_C_FLAGS=-O2 -g -fcommon" "-DEXAMPLES_ENABLE_C:BOOL=ON" "-DEXAMPLES_ENABLE_CXX:BOOL=ON" "-DEXAMPLES_ENABLE_F77:BOOL=ON" "-DEXAMPLES_ENABLE_F90:BOOL=ON" "-DEXAMPLES_INSTALL:BOOL=OFF" "-DFCMIX_ENABLE:BOOL=ON" "-DKLU_ENABLE:BOOL=ON" "-DKLU_INCLUDE_DIR=/gnu/store/cp95d1qfj1vsjn95rzj0f035rs966v0b-suitesparse-5.10.1/include" "-DKLU_LIBRARY_DIR=/gnu/store/cp95d1qfj1vsjn95rzj0f035rs966v0b-suitesparse-5.10.1/lib") exit-status: 1 term-signal: #f stop-signal: #f>
phase `configure' failed after 3.2 seconds
command "cmake" "../sundials-5.8.0" "-DCMAKE_BUILD_TYPE=RelWithDebInfo" "-DCMAKE_INSTALL_PREFIX=/gnu/store/95ax5rqb6k1rkfii2i2nnbjfazr58zvi-sundials-openmpi-5.8.0" "-DCMAKE_INSTALL_LIBDIR=lib" "-DCMAKE_INSTALL_RPATH_USE_LINK_PATH=TRUE" "-DCMAKE_INSTALL_RPATH=/gnu/store/95ax5rqb6k1rkfii2i2nnbjfazr58zvi-sundials-openmpi-5.8.0/lib" "-DCMAKE_VERBOSE_MAKEFILE=ON" "-DENABLE_MPI:BOOL=ON" "-DCMAKE_C_FLAGS=-O2 -g -fcommon" "-DEXAMPLES_ENABLE_C:BOOL=ON" "-DEXAMPLES_ENABLE_CXX:BOOL=ON" "-DEXAMPLES_ENABLE_F77:BOOL=ON" "-DEXAMPLES_ENABLE_F90:BOOL=ON" "-DEXAMPLES_INSTALL:BOOL=OFF" "-DFCMIX_ENABLE:BOOL=ON" "-DKLU_ENABLE:BOOL=ON" "-DKLU_INCLUDE_DIR=/gnu/store/cp95d1qfj1vsjn95rzj0f035rs966v0b-suitesparse-5.10.1/include" "-DKLU_LIBRARY_DIR=/gnu/store/cp95d1qfj1vsjn95rzj0f035rs966v0b-suitesparse-5.10.1/lib" failed with status 1
builder for `/gnu/store/nrj3w5gmy3g00880hwh3gxkp3kgzpxgd-sundials-openmpi-5.8.0.drv' failed with exit code 1
--8<---------------cut here---------------end--------------->8---
So it seems there’s a problem earlier than expected?
Thanks,
Ludo’.
next prev parent reply other threads:[~2022-04-29 12:03 UTC|newest]
Thread overview: 10+ messages / expand[flat|nested] mbox.gz Atom feed top
2022-04-28 18:15 [bug#55170] [PATCH 0/5] gnu: dealii: Add SUNDIALS dependency and update to 9.3.3 Paul A. Patience
2022-04-28 18:19 ` [bug#55170] [PATCH 1/5] gnu: sundials: Add 5.8.0 Paul A. Patience
2022-04-28 18:19 ` [bug#55170] [PATCH 2/5] gnu: dealii: Remove trailing booleans Paul A. Patience
2022-04-28 18:19 ` [bug#55170] [PATCH 3/5] gnu: dealii-openmpi: Remove input labels Paul A. Patience
2022-04-28 18:19 ` [bug#55170] [PATCH 4/5] gnu: dealii: Add SUNDIALS dependency Paul A. Patience
2022-04-28 18:19 ` [bug#55170] [PATCH 5/5] gnu: dealii: Update to 9.3.3 Paul A. Patience
2022-04-29 12:02 ` Ludovic Courtès [this message]
2022-05-02 14:01 ` [bug#55170] [PATCH 0/5] gnu: dealii: Add SUNDIALS dependency and update " Paul A. Patience
2022-05-03 15:36 ` Ludovic Courtès
2022-05-03 16:04 ` bug#55170: " Ludovic Courtès
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