* [bug#67251] [PATCH] gnu: python-imbalanced-learn: Update to 0.11.0.
@ 2023-11-17 23:56 Troy Figiel
2023-11-20 19:00 ` bug#67251: " Arun Isaac
0 siblings, 1 reply; 2+ messages in thread
From: Troy Figiel @ 2023-11-17 23:56 UTC (permalink / raw)
To: 67251
* gnu/packages/machine-learning.scm (python-imbalanced-learn): Update to
0.11.0.
[arguments]
<#:test-flags>: Move broken tests from "unbreak-tests" phase
to here.
<#:phases>: Add back some deleted python-keras and tensorflow tests.
[native-inputs]: Add python-keras, python-numpydoc and tensorflow.
Change-Id: Ibc2827e27ee23e0ffb491cb791bba4d1a3f1109d
---
gnu/packages/machine-learning.scm | 65 +++++++++++++++----------------
1 file changed, 31 insertions(+), 34 deletions(-)
diff --git a/gnu/packages/machine-learning.scm b/gnu/packages/machine-learning.scm
index a84377e1eb..7d833005bc 100644
--- a/gnu/packages/machine-learning.scm
+++ b/gnu/packages/machine-learning.scm
@@ -1663,45 +1663,42 @@ (define-public python-tslearn
(define-public python-imbalanced-learn
(package
(name "python-imbalanced-learn")
- (version "0.9.1")
- (source (origin
- (method url-fetch)
- (uri (pypi-uri "imbalanced-learn" version))
- (sha256
- (base32
- "0qnrmysnqpc8ii1w5n8mci20gcjhmjr7khvk7f2apdbqc2pgf52f"))))
+ (version "0.11.0")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (pypi-uri "imbalanced-learn" version))
+ (sha256
+ (base32 "1p4gdgc8nsq0vjmw4y4d2bp9g0m1c23d0zgrzs90pnz6b24ax0km"))))
(build-system pyproject-build-system)
(arguments
(list
- #:phases
- '(modify-phases %standard-phases
- (add-after 'unpack 'unbreak-tests
- (lambda _
- ;; The doctests require tensorflow
- (substitute* "setup.cfg"
- (("--doctest-modules") ""))
- ;; Some tests require a home directory
- (setenv "HOME" (getcwd))
- ;; We don't have keras
- (delete-file "imblearn/keras/tests/test_generator.py")
- ;; We don't have tensorflow
- (delete-file "imblearn/tensorflow/tests/test_generator.py"))))))
- (propagated-inputs
- (list python-joblib
- python-numpy
- python-scikit-learn
- python-scipy
- python-threadpoolctl))
- (native-inputs
- (list python-black
- python-flake8
- python-mypy
- python-pandas
- python-pytest
- python-pytest-cov))
+ #:test-flags '(list "-k"
+ ;; Although we cannot satify the Tensorflow and Keras requirements
+ ;; (python-keras >= 2.4.3 and tensorflow >= 2.4.3), all tests
+ ;; besides these pass.
+ "not balanced_batch_generator and not BalancedBatchGenerator")
+ #:phases '(modify-phases %standard-phases
+ (add-after 'unpack 'unbreak-tests
+ (lambda _
+ ;; Some tests require a home directory
+ (setenv "HOME"
+ (getcwd)))))))
+ (propagated-inputs (list python-joblib python-numpy python-scikit-learn
+ python-scipy python-threadpoolctl))
+ (native-inputs (list python-black
+ python-flake8
+ python-keras
+ python-mypy
+ python-numpydoc
+ python-pandas
+ python-pytest
+ python-pytest-cov
+ tensorflow))
(home-page "https://github.com/scikit-learn-contrib/imbalanced-learn")
(synopsis "Toolbox for imbalanced dataset in machine learning")
- (description "This is a Python package offering a number of re-sampling
+ (description
+ "This is a Python package offering a number of re-sampling
techniques commonly used in datasets showing strong between-class imbalance.
It is compatible with @code{scikit-learn}.")
(license license:expat)))
--
2.40.1
^ permalink raw reply related [flat|nested] 2+ messages in thread
* bug#67251: [PATCH] gnu: python-imbalanced-learn: Update to 0.11.0.
2023-11-17 23:56 [bug#67251] [PATCH] gnu: python-imbalanced-learn: Update to 0.11.0 Troy Figiel
@ 2023-11-20 19:00 ` Arun Isaac
0 siblings, 0 replies; 2+ messages in thread
From: Arun Isaac @ 2023-11-20 19:00 UTC (permalink / raw)
To: 67251-done; +Cc: Troy Figiel
Pushed, thanks!
I split the `guix style' reformatting into a separate commit.
^ permalink raw reply [flat|nested] 2+ messages in thread
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2023-11-17 23:56 [bug#67251] [PATCH] gnu: python-imbalanced-learn: Update to 0.11.0 Troy Figiel
2023-11-20 19:00 ` bug#67251: " Arun Isaac
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