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From: ludo@gnu.org (Ludovic Courtès)
To: Ricardo Wurmus <rekado@elephly.net>
Cc: 26373@debbugs.gnu.org
Subject: bug#26373: [PATCH 2/6] import cran: Add predicate for Bioconductor experiment packages.
Date: Mon, 10 Apr 2017 23:34:51 +0200	[thread overview]
Message-ID: <878tn8eykk.fsf@gnu.org> (raw)
In-Reply-To: <87lgr81idy.fsf@elephly.net> (Ricardo Wurmus's message of "Mon, 10 Apr 2017 15:50:33 +0200")

Ricardo Wurmus <rekado@elephly.net> skribis:

> Ludovic Courtès <ludo@gnu.org> writes:
>
>> Ricardo Wurmus <rekado@elephly.net> skribis:
>>
>>> * guix/import/cran.scm (bioconductor-experiment-package?): New variable.
>>
>> It seems to be a private and unused procedure.  Is it really needed?
>> :-)
>
> Oh, it wasn’t supposed to be private.  There are three kinds of
> bioconductor packages: the normal ones, experiment packages, and
> annotation packages.
>
> The latter two cannot be updated the usual way, so they are excluded
> from “bioconductor-package?”, but I thought that one may still want to
> be able to distinguish between them.  It’s true, though, that there’s
> nothing that can use “bioconductor-experiment-package?” yet, but it’s
> possible to add an updater for just the experiment packages.  (They use
> a different SVN repository.)

OK, I see.  Make sure to export it, then!  :-)

Thanks for the explanation,
Ludo’.

  reply	other threads:[~2017-04-10 21:36 UTC|newest]

Thread overview: 18+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2017-04-05 16:40 bug#26373: Various improvements to the CRAN importer Ricardo Wurmus
2017-04-05 16:42 ` bug#26373: [PATCH 1/6] import cran: Exclude experiment packages in predicate "bioconductor-package?" Ricardo Wurmus
2017-04-05 16:42   ` bug#26373: [PATCH 2/6] import cran: Add predicate for Bioconductor experiment packages Ricardo Wurmus
2017-04-10  9:51     ` Ludovic Courtès
2017-04-10 13:50       ` Ricardo Wurmus
2017-04-10 21:34         ` Ludovic Courtès [this message]
2017-04-05 16:42   ` bug#26373: [PATCH 3/6] import cran: Refactor "needs-zlib?" Ricardo Wurmus
2017-04-10  9:52     ` Ludovic Courtès
2017-04-05 16:42   ` bug#26373: [PATCH 4/6] import cran: Check if pkg-config is needed Ricardo Wurmus
2017-04-10  9:52     ` Ludovic Courtès
2017-04-05 16:42   ` bug#26373: [PATCH 5/6] import cran: Ensure substring indices are valid Ricardo Wurmus
2017-04-10  9:52     ` Ludovic Courtès
2017-04-05 16:42   ` bug#26373: [PATCH 6/6] import cran: Skip updating when meta data cannot be downloaded Ricardo Wurmus
2017-04-10  9:55     ` Ludovic Courtès
2017-04-10 13:55       ` Ricardo Wurmus
2017-04-10 21:37         ` Ludovic Courtès
2017-05-16 19:48           ` Ricardo Wurmus
2017-04-10  9:50   ` bug#26373: [PATCH 1/6] import cran: Exclude experiment packages in predicate "bioconductor-package?" Ludovic Courtès

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