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* [bug#28384] [PATCH] gnu: Fix build failures caused by commit.
@ 2017-09-07 16:43 Kei Kebreau
  2017-09-08 15:43 ` Ludovic Courtès
  0 siblings, 1 reply; 9+ messages in thread
From: Kei Kebreau @ 2017-09-07 16:43 UTC (permalink / raw)
  To: 28384; +Cc: Kei Kebreau

* gnu/packages/bioinformatics.scm (seek)[arguments]: Modify unpack phase.
* gnu/packages/ci.scm (cuirass)[arguments]: Add patch-/bin/sh phase.
---
 gnu/packages/bioinformatics.scm | 2 ++
 gnu/packages/ci.scm             | 6 +++++-
 2 files changed, 7 insertions(+), 1 deletion(-)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index bf8eb2e69..699c463bf 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4488,6 +4488,8 @@ distribution, coverage uniformity, strand specificity, etc.")
            (modify-phases %standard-phases
              (add-after 'unpack 'bootstrap
                (lambda _
+                 (substitute* "gen_tools_am"
+                   (("/usr/bin/env perl") (which "perl")))
                  (zero? (system* "bash" "gen_auto"))))
              (add-after 'build 'build-additional-tools
                (lambda* (#:key make-flags #:allow-other-keys)
diff --git a/gnu/packages/ci.scm b/gnu/packages/ci.scm
index c449754be..3b182b826 100644
--- a/gnu/packages/ci.scm
+++ b/gnu/packages/ci.scm
@@ -216,7 +216,11 @@ their dependencies.")
                (substitute* "Makefile.am"
                  (("tests/repo.scm \\\\") "\\"))
                #t))
-           (add-after 'disable-repo-tests 'bootstrap
+           (add-after 'disable-repo-tests 'patch-/bin/sh
+             (lambda _
+               (substitute* "build-aux/git-version-gen"
+                 (("#!/bin/sh") (string-append "#!" (which "sh"))))))
+           (add-after 'patch-/bin/sh 'bootstrap
              (lambda _ (zero? (system* "sh" "bootstrap"))))
            (add-after 'install 'wrap-program
              (lambda* (#:key inputs outputs #:allow-other-keys)
-- 
2.14.1

^ permalink raw reply related	[flat|nested] 9+ messages in thread

end of thread, other threads:[~2017-09-10 22:28 UTC | newest]

Thread overview: 9+ messages (download: mbox.gz / follow: Atom feed)
-- links below jump to the message on this page --
2017-09-07 16:43 [bug#28384] [PATCH] gnu: Fix build failures caused by commit Kei Kebreau
2017-09-08 15:43 ` Ludovic Courtès
2017-09-08 16:41   ` Kei Kebreau
2017-09-08 20:33     ` Ludovic Courtès
2017-09-08 22:10       ` Kei Kebreau
2017-09-10 12:53         ` Ludovic Courtès
2017-09-10 13:32           ` Kei Kebreau
2017-09-10 20:39             ` Ludovic Courtès
2017-09-10 22:26               ` bug#28384: " Kei Kebreau

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