unofficial mirror of guix-patches@gnu.org 
 help / color / mirror / code / Atom feed
From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <62297@debbugs.gnu.org>
Cc: rekado@elephly.net
Subject: [bug#62297] [PATCH 4/5] gnu: Add r-affylmgui.
Date: Mon, 20 Mar 2023 17:00:04 +0100	[thread overview]
Message-ID: <20230320160005.1594550-4-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <20230320160005.1594550-1-madalinionel.patrascu@mdc-berlin.de>

* gnu/packages/bioconductor.scm (r-affylmgui): New variable.
---
 gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++
 1 file changed, 31 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e3753b2ec..78ce740c2c 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2124,6 +2124,37 @@ (define-public r-affyilm
 of the Langmuir model.")
     (license license:gpl3)))
 
+(define-public r-affylmgui
+  (package
+    (name "r-affylmgui")
+    (version "1.72.0")
+    (source
+     (origin
+       (method url-fetch)
+       (uri (bioconductor-uri "affylmGUI" version))
+       (sha256
+        (base32 "0jds73pxqf522wcg8qd4b4k1qbhn51av5md1nhgcdnb6is0lzvxi"))))
+    (properties `((upstream-name . "affylmGUI")))
+    (build-system r-build-system)
+    (propagated-inputs
+     (list r-affy
+           r-affyio
+           r-affyplm
+           r-annotationdbi
+           r-biocgenerics
+           r-biocmanager
+           r-gcrma
+           r-limma
+           r-r2html
+           r-tkrplot
+           r-xtable))
+    (home-page "http://bioinf.wehi.edu.au/affylmGUI/")
+    (synopsis "GUI for limma package with Affymetrix microarrays")
+    (description
+     "This package provides a @acronym{GUI, Graphical User Interface} for analysis
+of Affymetrix microarray gene expression data using the affy and limma packages.")
+    (license license:gpl2+)))
+
 (define-public r-affyplm
   (package
     (name "r-affyplm")
-- 
2.39.2





  parent reply	other threads:[~2023-03-20 16:47 UTC|newest]

Thread overview: 7+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-03-20 15:57 [bug#62297] [PATCH] gnu: Add r-affyilm, r-affyplm, r-affylmgui, r-annotationhubdata and r-tkrplot MadalinIonel.Patrascu
2023-03-20 16:00 ` [bug#62297] [PATCH 1/5] gnu: Add r-affyilm Mădălin Ionel Patrașcu
2023-03-20 16:00   ` [bug#62297] [PATCH 2/5] gnu: Add r-affyplm Mădălin Ionel Patrașcu
2023-03-20 16:00   ` [bug#62297] [PATCH 3/5] gnu: Add r-tkrplot Mădălin Ionel Patrașcu
2023-03-20 16:00   ` Mădălin Ionel Patrașcu [this message]
2023-03-20 16:00   ` [bug#62297] [PATCH 5/5] gnu: Add r-annotationhubdata Mădălin Ionel Patrașcu
2023-03-20 18:33   ` bug#62297: [PATCH 1/5] gnu: Add r-affyilm Ricardo Wurmus

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

  List information: https://guix.gnu.org/

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=20230320160005.1594550-4-madalinionel.patrascu@mdc-berlin.de \
    --to=madalinionel.patrascu@mdc-berlin.de \
    --cc=62297@debbugs.gnu.org \
    --cc=rekado@elephly.net \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this public inbox

	https://git.savannah.gnu.org/cgit/guix.git

This is a public inbox, see mirroring instructions
for how to clone and mirror all data and code used for this inbox;
as well as URLs for read-only IMAP folder(s) and NNTP newsgroup(s).