From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp11.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms9.migadu.com with LMTPS id CCRVAQaOGGREOwAASxT56A (envelope-from ) for ; Mon, 20 Mar 2023 17:47:02 +0100 Received: from aspmx1.migadu.com ([2001:41d0:2:4a6f::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp11.migadu.com with LMTPS id kJBbAQaOGGQKDAAA9RJhRA (envelope-from ) for ; Mon, 20 Mar 2023 17:47:02 +0100 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 9EB41135D3 for ; Mon, 20 Mar 2023 17:47:01 +0100 (CET) Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=NOSx5gWW; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1679330821; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; bh=Twy/xFNRb2Go90QOsNwISQcS6fb6vlIQc+W5truOhcE=; b=MkEoZMYLzn7alkCcRSKf8WAuhnr6Ei95AU/4Ncl3tS37sZkEAodZb9sf0V9cd0e7QGMok+ pFhbP4RnIX+ocoozhcTv609m6vNP2+uZeucsx6xXZHnHYOTj6qWaIOoLvLTYvcHA915Wbh kTSIHB9EbO/A3zwlOCdZWKcnFGrnxJ/f/ZFSn0sqgzRMiOikDoVnQtPdopJ8pTMks7fY+q 5zIPg6LuyGNFsnt0ygorjMHLMeYpeRevoo96GBFOU8HuUVPAkKX7lkliBIxqPD7fyacFqy 1cbSQtTScU7ZMNGhYDCti7VFpIQILIEfIv28BirXlW9Tdc+Zps6bQ4TXo7hkHQ== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=NOSx5gWW; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" ARC-Seal: i=1; s=key1; d=yhetil.org; t=1679330821; a=rsa-sha256; cv=none; b=X6bDGVPm7Q8fpfqjCIkASTDSN4zBW4eS0TRnw/uMY604k4mrNzmg3DacIFFRhYtry0RHcr 3Fzlguc43/WvR+KqnoB/4hacM05nLfjfMymGzI7OtW0nlvtHPWM2+UeKLjSSSFTLQl2Y3G QQLUYz2zSNIt15YEqYm2/HSjKF3yiF18gS9nm4oDBRb4zku121us+ZFEp2CQYJ6+MVkVrU EkMgm3TFKDsd+IlaYQf7e2WG+VtGzX15mkJAWAIhftV7J0ENeXATBkYog5LVsRjXx/EMSP BCfGGGND4ri/BftH3wTuSRWrjArhGMtRRhWb6CbC47QOLUobLtqrM1kxkSu1Hw== Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1peHwY-0000Pi-DF; Mon, 20 Mar 2023 12:01:06 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1peHwW-0000OZ-Bn for guix-patches@gnu.org; Mon, 20 Mar 2023 12:01:04 -0400 Received: from debbugs.gnu.org ([209.51.188.43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1peHwW-0008Tg-1Q for guix-patches@gnu.org; Mon, 20 Mar 2023 12:01:04 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1peHwV-0001Bb-T3; Mon, 20 Mar 2023 12:01:03 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#62297] [PATCH 4/5] gnu: Add r-affylmgui. Resent-From: =?UTF-8?Q?M=C4=83d=C4=83lin?= Ionel =?UTF-8?Q?Patra=C8=99cu?= Original-Sender: "Debbugs-submit" Resent-CC: rekado@elephly.net, guix-patches@gnu.org Resent-Date: Mon, 20 Mar 2023 16:01:03 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 62297 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <62297@debbugs.gnu.org> Cc: rekado@elephly.net X-Debbugs-Original-Xcc: rekado@elephly.net Received: via spool by 62297-submit@debbugs.gnu.org id=B62297.16793280364480 (code B ref 62297); Mon, 20 Mar 2023 16:01:03 +0000 Received: (at 62297) by debbugs.gnu.org; 20 Mar 2023 16:00:36 +0000 Received: from localhost ([127.0.0.1]:55552 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peHw4-0001A6-Ax for submit@debbugs.gnu.org; Mon, 20 Mar 2023 12:00:36 -0400 Received: from b2062.mx.srv.dfn.de ([194.95.234.172]:35349) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1peHvx-000191-8L for 62297@debbugs.gnu.org; Mon, 20 Mar 2023 12:00:29 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :references:in-reply-to:x-mailer:message-id:date:date:subject :subject:from:from:received; s=mdc; t=1679328023; x=1681142424; bh=u5VjKAG0upoi4ciZ1U1p2wqucnNngDXXTH+ukMSyywI=; b=NOSx5gWWepI7 I8EO5Lmxf1fBDJhdVpPLtdkP3S2tvtfVOsA3yZ5+LuZoJt2zgfrTx5w+UFq7ATyy NbRG2lRersdVY+22UHLpuPdtswF+PyCLrRdZbvi/hPts5OeCCH53yPHYXhHV5Z/h qiPAIGgDjg9hyr+QNC0R8hz1eMle6KU= Received: from SW-IT-P-EX4.mdc-berlin.net (mgw4.mdc-berlin.de [141.80.113.62]) by b2062.mx.srv.dfn.de (Postfix) with ESMTPS id 0519E160169 for <62297@debbugs.gnu.org>; Mon, 20 Mar 2023 17:00:23 +0100 (CET) Received: from pimi-TRX40-AORUS-PRO-WIFI.lan (77.23.232.54) by SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.21; Mon, 20 Mar 2023 17:00:18 +0100 From: =?UTF-8?Q?M=C4=83d=C4=83lin?= Ionel =?UTF-8?Q?Patra=C8=99cu?= Date: Mon, 20 Mar 2023 17:00:04 +0100 Message-ID: <20230320160005.1594550-4-madalinionel.patrascu@mdc-berlin.de> X-Mailer: git-send-email 2.39.2 In-Reply-To: <20230320160005.1594550-1-madalinionel.patrascu@mdc-berlin.de> References: <20230320160005.1594550-1-madalinionel.patrascu@mdc-berlin.de> MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [77.23.232.54] X-ClientProxiedBy: SW-IT-P-EX3.mdc-berlin.net (141.80.113.61) To SW-IT-P-EX4.mdc-berlin.net (141.80.113.62) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27516.000 X-TM-AS-Result: No-10--4.012200-5.000000 X-TMASE-MatchedRID: 4r2MyAYFTnf/R1NSMc2qCU7nLUqYrlslFIuBIWrdOeOjEIt+uIPPOAbo TDS3zulAcjTcMkuJPYkZijt1cgK90Badv+F8ucSI194/5X9VfCxSHjB5Y+o5ZPcZ6rUTj2OGmA0 yITMNzjl9LQinZ4QefCP/VFuTOXUTEKa2f+1p7r3kwjHXXC/4I8prJP8FBOIaGYxVZA32xOEIS/ sBf9DoXESHEvH6t5okTLFeB2wyz6k8bwEnk9llPWgG414mT8YABV1Rz7+yfWcbxhjPyP3i0YX9a KYW3bwsABCI1SMHw7y051Z79ST++7Bk72SZpZa8/z4Ty9JAKR/JI5vnpRHGyA== X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--4.012200-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27516.000 X-TM-SNTS-SMTP: 638C72B30B8C20A526CBEFEC57509D66A917B2AD8AEEFDDBB907B633D178BCBF2002:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: X-Migadu-Queue-Id: 9EB41135D3 X-Spam-Score: -2.16 X-Migadu-Spam-Score: -2.16 X-Migadu-Scanner: scn0.migadu.com List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Country: US X-Migadu-Flow: FLOW_IN X-TUID: rfxYpRN9h5bb * gnu/packages/bioconductor.scm (r-affylmgui): New variable. --- gnu/packages/bioconductor.scm | 31 +++++++++++++++++++++++++++++++ 1 file changed, 31 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1e3753b2ec..78ce740c2c 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2124,6 +2124,37 @@ (define-public r-affyilm of the Langmuir model.") (license license:gpl3))) +(define-public r-affylmgui + (package + (name "r-affylmgui") + (version "1.72.0") + (source + (origin + (method url-fetch) + (uri (bioconductor-uri "affylmGUI" version)) + (sha256 + (base32 "0jds73pxqf522wcg8qd4b4k1qbhn51av5md1nhgcdnb6is0lzvxi")))) + (properties `((upstream-name . "affylmGUI"))) + (build-system r-build-system) + (propagated-inputs + (list r-affy + r-affyio + r-affyplm + r-annotationdbi + r-biocgenerics + r-biocmanager + r-gcrma + r-limma + r-r2html + r-tkrplot + r-xtable)) + (home-page "http://bioinf.wehi.edu.au/affylmGUI/") + (synopsis "GUI for limma package with Affymetrix microarrays") + (description + "This package provides a @acronym{GUI, Graphical User Interface} for analysis +of Affymetrix microarray gene expression data using the affy and limma packages.") + (license license:gpl2+))) + (define-public r-affyplm (package (name "r-affyplm") -- 2.39.2