* [bug#56280] [PATCH] gnu: Add r-basespacer.
@ 2022-06-28 15:13 Mădălin Ionel Patrașcu
2022-10-27 13:42 ` bug#56280: " Ricardo Wurmus
0 siblings, 1 reply; 2+ messages in thread
From: Mădălin Ionel Patrașcu @ 2022-06-28 15:13 UTC (permalink / raw)
To: 56280
* gnu/packages/bioconductor.scm (r-basespacer): New variable.
---
gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
1 file changed, 23 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..51aae2a0f7 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2029,6 +2029,29 @@ (define-public r-aneufinder
sequencing data.")
(license license:artistic2.0)))
+(define-public r-basespacer
+ (package
+ (name "r-basespacer")
+ (version "1.40.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "BaseSpaceR" version))
+ (sha256
+ (base32
+ "0jyw4pnybsd6ywpaamk5ywkrcib2z48farsnszmwq97zlbmra7fj"))))
+ (properties `((upstream-name . "BaseSpaceR")))
+ (build-system r-build-system)
+ (propagated-inputs (list r-rcurl r-rjsonio))
+ (home-page "https://bioconductor.org/packages/BaseSpaceR")
+ (synopsis "R SDK for BaseSpace RESTful API")
+ (description
+ "This package provides a @code{R} interface to Illumina's BaseSpace cloud
+computing environment, enabling the fast development of data analysis and
+visualisation tools. Besides providing an easy to use set of tools for
+manipulating the data from BaseSpace, it also facilitates the access to R's
+rich environment of statistical and data analysis open source tools.")
+ (license license:asl2.0)))
+
(define-public r-biocversion
(package
(name "r-biocversion")
base-commit: 144a750f8b10e606751bc887bcb09e7fb7ae09ff
--
2.36.1
^ permalink raw reply related [flat|nested] 2+ messages in thread
* bug#56280: [PATCH] gnu: Add r-basespacer.
2022-06-28 15:13 [bug#56280] [PATCH] gnu: Add r-basespacer Mădălin Ionel Patrașcu
@ 2022-10-27 13:42 ` Ricardo Wurmus
0 siblings, 0 replies; 2+ messages in thread
From: Ricardo Wurmus @ 2022-10-27 13:42 UTC (permalink / raw)
To: 56280-done
Applied with minor changes. Thank you!
--
Ricardo
^ permalink raw reply [flat|nested] 2+ messages in thread
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2022-06-28 15:13 [bug#56280] [PATCH] gnu: Add r-basespacer Mădălin Ionel Patrașcu
2022-10-27 13:42 ` bug#56280: " Ricardo Wurmus
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