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spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Spam-Score: 6.95 Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=czEPrAyv; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" X-Migadu-Queue-Id: 35B6AB4B X-Spam-Score: 6.95 X-Migadu-Scanner: scn1.migadu.com X-TUID: dsgJ6xDZdgtr * gnu/packages/bioconductor.scm (r-basespacer): New variable. --- gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index 1e87b190c2..51aae2a0f7 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -2029,6 +2029,29 @@ (define-public r-aneufinder sequencing data.") (license license:artistic2.0))) +(define-public r-basespacer + (package + (name "r-basespacer") + (version "1.40.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "BaseSpaceR" version)) + (sha256 + (base32 + "0jyw4pnybsd6ywpaamk5ywkrcib2z48farsnszmwq97zlbmra7fj")))) + (properties `((upstream-name . "BaseSpaceR"))) + (build-system r-build-system) + (propagated-inputs (list r-rcurl r-rjsonio)) + (home-page "https://bioconductor.org/packages/BaseSpaceR") + (synopsis "R SDK for BaseSpace RESTful API") + (description + "This package provides a @code{R} interface to Illumina's BaseSpace cloud +computing environment, enabling the fast development of data analysis and +visualisation tools. Besides providing an easy to use set of tools for +manipulating the data from BaseSpace, it also facilitates the access to R's +rich environment of statistical and data analysis open source tools.") + (license license:asl2.0))) + (define-public r-biocversion (package (name "r-biocversion") base-commit: 144a750f8b10e606751bc887bcb09e7fb7ae09ff -- 2.36.1