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From: Sharlatan Hellseher <sharlatanus@gmail.com>
To: 70489@debbugs.gnu.org
Cc: Sharlatan Hellseher <sharlatanus@gmail.com>,
	Andreas Enge <andreas@enge.fr>, Eric Bavier <bavier@posteo.net>,
	Sharlatan Hellseher <sharlatanus@gmail.com>
Subject: [bug#70489] [PATCH 41/47] gnu: python-reproject: Enable tests.
Date: Sun, 21 Apr 2024 00:22:30 +0100	[thread overview]
Message-ID: <e8fd3c6adc52a3cf9f320ebced6faf7420cbf2a7.1713654571.git.sharlatanus@gmail.com> (raw)
In-Reply-To: <cover.1713654571.git.sharlatanus@gmail.com>

* gnu/packages/astronomy.scm (python-reproject): Enable tests.
[arguments]: <#:tests-flags>: Add them as seen in tox.ini.
<#:phases>: Rename 'writable-home to 'prepare-test-environment to reflect
purpose and build extension before tests.
[native-inputs]: Add python-xdist.

Change-Id: I7a5454e3ce241b7a54626f8aba27602b4965c25b
---
 gnu/packages/astronomy.scm | 25 ++++++++++++-------------
 1 file changed, 12 insertions(+), 13 deletions(-)

diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index 32c70b9bdf..58bf607059 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -2742,16 +2742,11 @@ (define-public python-reproject
     (build-system pyproject-build-system)
     (arguments
      (list
-      ;; FIXME: Failing tests
-      ;;
-      ;; reproject/adaptive/core.py:7: in <module>
-      ;; from .deforest import map_coordinates
-      ;; E   ModuleNotFoundError: No module named 'reproject.adaptive.deforest'
-      ;;
-      ;; Project removed setup.py and there is no alternative to `python
-      ;; setup.py build_ext'
-      ;; See: https://github.com/pypa/setuptools/discussions/3388
-      #:tests? #f
+      #:test-flags
+      #~(list "--arraydiff"
+              "--arraydiff-default-format=fits"
+              "--numprocesses" "auto"
+              "--pyargs" "reproject")
       #:phases
       #~(modify-phases %standard-phases
           ;; setup.py was removed in a659a260bdd7635cddc8f33c4ea04a3b6d8c1f84
@@ -2771,9 +2766,11 @@ (define-public python-reproject
           (add-before 'check 'writable-compiler
             (lambda _
               (make-file-writable "reproject/_compiler.c")))
-          (add-before 'check 'writable-home
+          (add-before 'check 'prepare-test-environment
             (lambda _
-              (setenv "HOME" (getcwd)))))))
+              (setenv "HOME" "/tmp")
+              ;; Cython extensions have to be built before running the tests.
+              (invoke "python" "setup.py" "build_ext" "--inplace"))))))
     (propagated-inputs
      (list python-asdf
            python-astropy
@@ -2791,9 +2788,11 @@ (define-public python-reproject
     (native-inputs
      (list python-cython-3
            python-extension-helpers
+           python-pytest
            python-pytest-astropy
+           python-pytest-xdist
+           ;; python-sunpy ; circular dependencies, test optional
            python-semantic-version
-           python-pytest
            python-setuptools-scm))
     (home-page "https://reproject.readthedocs.io")
     (synopsis "Astronomical image reprojection in Python")
-- 
2.41.0





  parent reply	other threads:[~2024-04-20 23:45 UTC|newest]

Thread overview: 51+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2024-04-20 23:15 [bug#70488] [PATCH 00/47] Astronomy 2024/02 updates Sharlatan Hellseher
2024-04-20 23:19 ` bug#70488: " Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 01/47] gnu: cfitsio: Update to 4.4.0 Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 02/47] gnu: stellarium: Update to 24.1 Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 03/47] gnu: indi-2.0: Update to 2.0.7 Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 04/47] gnu: libxisf: Update to 0.2.12 Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 05/47] gnu: python-pytest-socket: Update to 0.7.0 Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 06/47] gnu: parfive: Update to 2.1.0 Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 07/47] gnu: python-exif-read: Update to 3.0.0 Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 08/47] gnu: Add python-pysiaf Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 09/47] gnu: Add python-supersmoother Sharlatan Hellseher
2024-04-20 23:21 ` [bug#70489] [PATCH 10/47] gnu: python-asdf: Update to 3.2.0 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 11/47] gnu: python-asdf-astropy: Update to 0.6.1 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 12/47] gnu: python-astropy-iers-data: Update to 0.2024.4.15.2.45.49 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 13/47] gnu: python-astropy: Symplify package Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 14/47] gnu: python-astropy: Update to 6.0.1 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 15/47] gnu: python-astropy-healpix: Update to 1.0.3 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 16/47] gnu: python-jwst: Update to 1.14.0 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 17/47] gnu: python-stcal: Update to 1.7.0 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 18/47] gnu: python-stdatamodels: Update to 1.10.1 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 19/47] gnu: python-stsci-imagestats: Update to 1.8.2 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 20/47] gnu: python-stsci-image: Refresh package style Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 21/47] gnu: python-synphot: Add custom check phase Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 22/47] gnu: python-synphot: Update to 1.4.0 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 23/47] gnu: python-tweakwcs: Adjust indentation Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 24/47] gnu: python-tweakwcs: Update to 0.8.7 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 25/47] gnu: python-ginga: Update to 5.0.1 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 26/47] gnu: python-ginga: Set HOME for sanity check Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 27/47] gnu: python-gatspy: Refresh package style Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 28/47] gnu: python-bayesicfitting: " Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 29/47] gnu: python-bayesicfitting: Update to 3.2.1 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 30/47] gnu: Add python-assay Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 31/47] gnu: python-skyfield: Enable tests Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 32/47] gnu: python-sunpy: Update to 5.1.2 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 33/47] gnu: python-astroplan: Update to 0.10 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 34/47] gnu: python-rad: Update to 0.19.2 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 35/47] gnu: python-regions: Update to 0.9 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 36/47] gnu: python-roman-datamodels: Update to 0.19.1 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 37/47] gnu: python-casa-formats-io: Update to 0.3.0 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 38/47] gnu: python-specutils: Update to 1.14.0 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 39/47] gnu: python-photutils: Update to 1.12 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 40/47] gnu: python-reproject: Update to 0.13.1 Sharlatan Hellseher
2024-04-20 23:22 ` Sharlatan Hellseher [this message]
2024-04-20 23:22 ` [bug#70489] [PATCH 42/47] gnu: python-asdf: Adjust inputs Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 43/47] gnu: python-crds: Update to 11.17.20 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 44/47] gnu: python-stsci-stimage: Update to 0.2.8 Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 45/47] gnu: python-stsci-stimage: Adjust test steps Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 46/47] gnu: Add scamp Sharlatan Hellseher
2024-04-20 23:22 ` [bug#70489] [PATCH 47/47] gnu: Add psfex Sharlatan Hellseher
2024-05-01  7:06 ` bug#70489: [PATCH 00/47] Astronomy 2024/04 updates Sharlatan Hellseher
2024-05-04  4:29   ` [bug#70489] " Leo Famulari

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