guix refresh --update Removes Needed Dependencies

["jgart" <jgart@dismail.de>]

Hi Guixers,

`guix refresh --update` removes Tex Dependencies that are needed. This makes it more tedious to update packages :(

See the diff below which was the result of running:

./pre-inst-env guix refresh --update python-sphinx

Diff:

[jgart@fedora guix] [env]$ git diff
diff --git a/gnu/packages/sphinx.scm b/gnu/packages/sphinx.scm
index eee1f1c4a8..92658a3632 100644
--- a/gnu/packages/sphinx.scm
+++ b/gnu/packages/sphinx.scm
@@ -64,14 +64,14 @@ (define-module (gnu packages sphinx)
 (define-public python-sphinx
   (package
     (name "python-sphinx")
-    (version "5.1.1")
+    (version "7.2.6")
     (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "Sphinx" version))
        (sha256
         (base32
-         "12cdy3m5c09lpf2bbxzbhm5v5y9fk7jgm94qrzggpq86waj28cms"))))
+         "1dasilib5w98hwr5rdnv1ri2dmdxv3fa42dscdcqss4hxbhn0lcs"))))
     (build-system python-build-system)
     (arguments
      '(#:phases
@@ -87,57 +87,39 @@ (define-public python-sphinx
                (setenv "HOME" "/tmp")   ;for test_cython
                (invoke "make" "test")))))))
     (propagated-inputs
-     (list python-babel
+     (list python-alabaster
+           python-babel
+           python-colorama
+           python-cython
            python-docutils
-           python-jinja2
+           python-docutils-stubs
+           python-filelock
+           python-flake8
+           python-flake8-simplify
+           python-html5lib
            python-imagesize
            python-importlib-metadata
+           python-isort
+           python-jinja2
+           python-mypy
            python-packaging
            python-pygments
+           python-pytest
            python-requests
+           python-ruff
+           python-setuptools
            python-snowballstemmer
-           python-sphinx-alabaster-theme
+           python-sphinx-lint
            python-sphinxcontrib-applehelp
            python-sphinxcontrib-devhelp
            python-sphinxcontrib-htmlhelp
            python-sphinxcontrib-jsmath
            python-sphinxcontrib-qthelp
            python-sphinxcontrib-serializinghtml
-
-           ;; The Sphinx LaTeX library '\RequirePackage' or \\usepackage
-           ;; these:
-           texlive-amsfonts             ;amsmath, amssymb, amstext
-           texlive-amsmath
-           texlive-capt-of
-           texlive-carlisle             ;remreset
-           texlive-cmap
-           texlive-etoolbox
-           texlive-fancyhdr
-           texlive-fancyvrb
-           texlive-float
-           texlive-fncychap
-           texlive-framed
-           texlive-geometry
-           texlive-hyperref
-           texlive-kvoptions
-           texlive-latex-bin
-           texlive-ltxcmds
-           texlive-needspace
-           texlive-oberdiek             ;hypcap
-           texlive-parskip
-           texlive-preview
-           texlive-tabulary
-           texlive-titlesec
-           texlive-tools                ;multicol, longtable
-           texlive-upquote
-           texlive-varwidth
-           texlive-wrapfig
-           texlive-xcolor))
+           python-sphinxcontrib-websupport
+           python-types-requests))
     (native-inputs
-     (list imagemagick                  ;for "convert"
-           python-cython
-           python-html5lib
-           python-pytest))
+     (list))
     (home-page "https://www.sphinx-doc.org")
     (synopsis "Python documentation generator")
     (description "Sphinx is a tool that makes it easy to create documentation