From: "Hong.Li@mdc-berlin.de" <Hong.Li@mdc-berlin.de>
To: zimoun <zimon.toutoune@gmail.com>
Cc: "Ludovic Courtès" <ludovic.courtes@inria.fr>,
"help-guix@gnu.org" <help-guix@gnu.org>
Subject: Re: [ext] Re: failed to install the python-umap-learn package
Date: Wed, 30 Sep 2020 20:47:06 +0000 [thread overview]
Message-ID: <aea8c548c7eb4b3db07f12d1bfaa5dac@mdc-berlin.de> (raw)
In-Reply-To: <CAJ3okZ1qo_7nXxKohjx23sQSBbYwt7ZNy4x9Cb37K+L8X-dMRg@mail.gmail.com>
Dear Simon,
Thank you so much, the build was successful using:
guix time-machine --commit=cac674d99dc4a332e6210c57ec7f1b8164f66642 \
-C /tmp/chan.scm \
-- package -p .guix-profile -i python-umap-learn
best regards,
Hong
________________________________
From: zimoun <zimon.toutoune@gmail.com>
Sent: 30 September 2020 15:54
To: Li, Hong
Cc: Ludovic Courtès; help-guix@gnu.org
Subject: Re: [ext] Re: failed to install the python-umap-learn package
Dear,
Please run:
echo "%default-channels" > /tmp/chan.scm
guix time-machine --commit=cac674d99dc4a332e6210c57ec7f1b8164f66642 \
-C /tmp/chan.scm \
-- package -i pyhton-umap-learn
This will fix your initial issue, I guess.
Exactly, this works in the end.
> [hli@max-login3.mdc-berlin.net:~] $ guix time-machine --commit=cd5406effa34fa5cfda7eb7bbd2ccaf5201cf523 -C /tmp/chan.scm -- package -p guix/new/.guix-profile -i python-umap-learn
I have not checked in your previous email, but it is the wrong commit.
I tried all succeeded commits, and this commit is the first succeeded one from 2020-01-07 03:09:35
https://data.guix.gnu.org/repository/1/branch/master/package/python-umap-learn/output-history
> build of /gnu/store/vxf3qwhkahgzfhwp6c63vm8vky9fj5bl-python-scikit-learn-0.20.4.drv failed
> View build log at '/gnu/var/log/guix/drvs/vx/f3qwhkahgzfhwp6c63vm8vky9fj5bl-python-scikit-learn-0.20.4.drv'.
> guix package: error: build of `/gnu/store/vxf3qwhkahgzfhwp6c63vm8vky9fj5bl-python-scikit-learn-0.20.4.drv' failed
It could be expected since the package 'python-scikit-learn' is broken:
https://data.guix.gnu.org/repository/1/branch/master/package/python-scikit-learn/output-history
especially for the commit you are trying (which is not the one you
need for the working 'python-umap-learn' package).
> Why this commit? 'python-umap-learn' should be broken
>
> This commit is the most recent succeeded build from 2020-04-18 19:24:20, you also suggested this commit before.
Ah yeah but then what was the previous commit
cd5406effa34fa5cfda7eb7bbd2ccaf5201cf523? :-)
> [hli@max-login3.mdc-berlin.net:~] $ guix time-machine --commit=cac674d99dc4a332e6210c57ec7f1b8164f66642 -- help
> Updating channel 'guix' from Git repository at 'https://git.savannah.gnu.org/git/guix.git'...
> Updating channel 'guix-bimsb' from Git repository at 'https://github.com/BIMSBbioinfo/guix-bimsb.git'...
> Updating channel 'guix-past' from Git repository at 'https://gitlab.inria.fr/guix-hpc/guix-past'...
> Updating channel 'guix-bimsb-nonfree' from Git repository at 'https://github.com/BIMSBbioinfo/guix-bimsb-nonfree.git'...
[...]
> /builder for `/gnu/store/yaj4m68r6l9jhdb767psz79fm84hb6x6-guix-package-cache.drv' failed to produce output path `/gnu/store/9vpcvp00acz4lvglfs1k69a4i05p5hbw-guix-package-cache'
> build of /gnu/store/yaj4m68r6l9jhdb767psz79fm84hb6x6-guix-package-cache.drv failed
> View build log at '/gnu/var/log/guix/drvs/ya/j4m68r6l9jhdb767psz79fm84hb6x6-guix-package-cache.drv'.
> cannot build derivation `/gnu/store/zz2557r32hsq2ksa53ix4ygaskkrs2qi-profile.drv': 1 dependencies couldn't be built
> guix time-machine: error: build of `/gnu/store/zz2557r32hsq2ksa53ix4ygaskkrs2qi-profile.drv' failed
This comes from the extra 3 channels you added. If you remove them
(see above), then it should work, I guess.
Hope that helps,
simon
prev parent reply other threads:[~2020-09-30 21:04 UTC|newest]
Thread overview: 9+ messages / expand[flat|nested] mbox.gz Atom feed top
2020-09-21 11:23 failed to install the python-umap-learn package Hong.Li
2020-09-29 14:09 ` Ludovic Courtès
2020-09-29 14:56 ` zimoun
2020-09-30 8:56 ` Ludovic Courtès
2020-09-30 11:41 ` [ext] " Hong.Li
2020-09-30 12:11 ` zimoun
2020-09-30 13:08 ` Hong.Li
2020-09-30 13:54 ` zimoun
2020-09-30 20:47 ` Hong.Li [this message]
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