From: Leo Famulari <leo@famulari.name>
To: 47171@debbugs.gnu.org, rekado@elephly.net, zimon.toutoune@gmail.com
Subject: [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor).
Date: Mon, 15 Mar 2021 19:56:18 -0400 [thread overview]
Message-ID: <YE/0IpB2HTm8XwWT@jasmine.lan> (raw)
In-Reply-To: <87pn00m4ig.fsf@elephly.net>
On Mon, Mar 15, 2021 at 11:33:11PM +0100, Ricardo Wurmus wrote:
> Hi,
>
> > zimoun (10):
> > gnu: r-limma: Move to (gnu packages bioconductor).
> > gnu: r-xvector: Move to (gnu packages bioconductor).
> > gnu: r-genomicranges: Move to (gnu packages bioconductor).
> > gnu: r-biobase: Move to (gnu packages bioconductor).
> > gnu: r-annotationdbi: Move to (gnu packages bioconductor).
> > gnu: r-biomart: Move to (gnu packages bioconductor).
> > gnu: r-biocparallel: Move to (gnu packages bioconductor).
> > gnu: r-biostrings: Move to (gnu packages bioconductor).
> > gnu: r-rsamtools: Move to (gnu packages bioconductor).
> > gnu: r-delayedarray: Move to (gnu packages bioconductor).
>
> Thanks, I’ve pushed them all.
These commits caused `guix pull` to fail, as described here:
https://git.savannah.gnu.org/cgit/guix.git/commit/?id=8ec0ca8faff62f19426f22aeb1bd59a8950ca05a
I think we just needed to import the bioconductor module in the cran
module, but I wasn't sure so I reverted them in order to fix the problem
quickly.
next prev parent reply other threads:[~2021-03-15 23:57 UTC|newest]
Thread overview: 24+ messages / expand[flat|nested] mbox.gz Atom feed top
2021-03-15 18:07 [bug#47171] [PATCH 00/10] Move some Bioconductor packages to (gnu packages bioconductor) zimoun
2021-03-15 18:08 ` [bug#47171] [PATCH 01/10] gnu: r-limma: Move " zimoun
2021-03-15 18:08 ` [bug#47171] [PATCH 02/10] gnu: r-xvector: " zimoun
2021-03-15 18:08 ` [bug#47171] [PATCH 03/10] gnu: r-genomicranges: " zimoun
2021-03-15 18:08 ` [bug#47171] [PATCH 04/10] gnu: r-biobase: " zimoun
2021-03-15 18:08 ` [bug#47171] [PATCH 05/10] gnu: r-annotationdbi: " zimoun
2021-03-15 18:09 ` [bug#47171] [PATCH 06/10] gnu: r-biomart: " zimoun
2021-03-15 18:09 ` [bug#47171] [PATCH 07/10] gnu: r-biocparallel: " zimoun
2021-03-15 18:09 ` [bug#47171] [PATCH 08/10] gnu: r-biostrings: " zimoun
2021-03-15 18:09 ` [bug#47171] [PATCH 09/10] gnu: r-rsamtools: " zimoun
2021-03-15 18:09 ` [bug#47171] [PATCH 10/10] gnu: r-delayedarray: " zimoun
2021-03-15 22:33 ` bug#47171: [PATCH 00/10] Move some Bioconductor packages " Ricardo Wurmus
2021-03-15 23:56 ` Leo Famulari [this message]
2021-03-16 12:27 ` [bug#47171] " zimoun
2021-03-16 13:20 ` Ricardo Wurmus
2021-03-16 13:30 ` zimoun
2021-03-16 16:08 ` Ricardo Wurmus
2021-03-16 16:36 ` zimoun
2021-03-16 22:04 ` Ricardo Wurmus
2021-03-17 20:15 ` zimoun
2021-03-17 20:14 ` [bug#47171] [PATCH v2 1/3] gnu: r-bisquerna: Move " zimoun
2021-03-17 20:14 ` [bug#47171] [PATCH v2 2/3] gnu: r-absfiltergsea: " zimoun
2021-03-17 20:14 ` [bug#47171] [PATCH v2 3/3] Revert "Revert some commits that caused `guix pull` to fail." zimoun
2021-03-31 19:29 ` bug#47171: [PATCH v2 1/3] gnu: r-bisquerna: Move to (gnu packages bioconductor) Ricardo Wurmus
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