all messages for Guix-related lists mirrored at yhetil.org
 help / color / mirror / code / Atom feed
From: Theodore Ehrenborg <theodore.ehrenborg@gmail.com>
To: 61121@debbugs.gnu.org
Subject: bug#61121: Cannot import IJulia in Julia
Date: Sat, 28 Jan 2023 13:45:00 +0000	[thread overview]
Message-ID: <CA+oeq6n9L3UTPMSpBb8ZWmhCEHMA0L_Jae7zyCvEZb4UTOPxkQ@mail.gmail.com> (raw)

[-- Attachment #1: Type: text/plain, Size: 1044 bytes --]

Hi Guix,

I would like to run a Jupyter notebook using Julia, so I need to install
the IJulia backend:

guix install julia
julia # Enter julia REPL
] # To go into the julia pkg REPL
add IJulia
# Now type backspace to go to julia REPL
using IJulia

This produces the error:

[ Info: Precompiling IJulia [7073ff75-c697-5162-941a-fcdaad2a7d2a]
ERROR: LoadError: InitError: SystemError: opening file
"/gnu/store/npj8z0g9nx14wl22yphqfs2c5w4qk5jk-julia-1.8.3/share/julia/cert.pem":
No such file or directory

The full error message is here: https://pastebin.com/qC8yyHXT

I saw a very similar bug on Gentoo:

Without this file (which can be a symbolic link to
`/etc/ssl/certs/ca-certificates.crt`) many Julia 1.8.3 packages, e.g.
`HTTP`, do not work.
This is what happens:

julia> import HTTP
[ Info: Precompiling HTTP [cd3eb016-35fb-5094-929b-558a96fad6f3]
ERROR: LoadError: InitError: SystemError: opening file
"/usr/share/julia/cert.pem":

(https://bugs.gentoo.org/888978)

Any help would be greatly appreciated.

Best regards,
Theodore Ehrenborg

[-- Attachment #2: Type: text/html, Size: 1518 bytes --]

             reply	other threads:[~2023-01-28 15:21 UTC|newest]

Thread overview: 6+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-01-28 13:45 Theodore Ehrenborg [this message]
2023-01-30 12:27 ` bug#61121: Cannot import IJulia in Julia Simon Tournier
2023-01-30 21:55   ` Theodore Ehrenborg
2023-01-31 11:34     ` Simon Tournier
2023-02-09  9:29       ` Efraim Flashner
2023-02-09 14:53       ` Efraim Flashner

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=CA+oeq6n9L3UTPMSpBb8ZWmhCEHMA0L_Jae7zyCvEZb4UTOPxkQ@mail.gmail.com \
    --to=theodore.ehrenborg@gmail.com \
    --cc=61121@debbugs.gnu.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this external index

	https://git.savannah.gnu.org/cgit/guix.git

This is an external index of several public inboxes,
see mirroring instructions on how to clone and mirror
all data and code used by this external index.