all messages for Guix-related lists mirrored at yhetil.org
 help / color / mirror / code / Atom feed
blob 9f2aab250ed4948b36726831e7ac811145474eec 34018 bytes (raw)
name: gnu/packages/serialization.scm 	 # note: path name is non-authoritative(*)

  1
  2
  3
  4
  5
  6
  7
  8
  9
 10
 11
 12
 13
 14
 15
 16
 17
 18
 19
 20
 21
 22
 23
 24
 25
 26
 27
 28
 29
 30
 31
 32
 33
 34
 35
 36
 37
 38
 39
 40
 41
 42
 43
 44
 45
 46
 47
 48
 49
 50
 51
 52
 53
 54
 55
 56
 57
 58
 59
 60
 61
 62
 63
 64
 65
 66
 67
 68
 69
 70
 71
 72
 73
 74
 75
 76
 77
 78
 79
 80
 81
 82
 83
 84
 85
 86
 87
 88
 89
 90
 91
 92
 93
 94
 95
 96
 97
 98
 99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
563
564
565
566
567
568
569
570
571
572
573
574
575
576
577
578
579
580
581
582
583
584
585
586
587
588
589
590
591
592
593
594
595
596
597
598
599
600
601
602
603
604
605
606
607
608
609
610
611
612
613
614
615
616
617
618
619
620
621
622
623
624
625
626
627
628
629
630
631
632
633
634
635
636
637
638
639
640
641
642
643
644
645
646
647
648
649
650
651
652
653
654
655
656
657
658
659
660
661
662
663
664
665
666
667
668
669
670
671
672
673
674
675
676
677
678
679
680
681
682
683
684
685
686
687
688
689
690
691
692
693
694
695
696
697
698
699
700
701
702
703
704
705
706
707
708
709
710
711
712
713
714
715
716
717
718
719
720
721
722
723
724
725
726
727
728
729
730
731
732
733
734
735
736
737
738
739
740
741
742
743
744
745
746
747
748
749
750
751
752
753
754
755
756
757
758
759
760
761
762
763
764
765
766
767
768
769
770
771
772
773
774
775
776
777
778
779
780
781
782
783
784
785
786
787
788
789
790
791
792
793
794
795
796
797
798
799
800
801
802
803
804
805
806
807
808
809
810
811
812
813
814
815
816
817
818
819
820
821
822
823
824
825
826
827
828
829
830
831
832
833
834
835
836
837
838
839
840
841
842
843
844
845
846
847
848
849
850
851
852
853
854
855
856
857
858
859
860
861
862
863
864
865
866
867
868
869
870
871
872
873
874
875
 
;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015, 2017, 2019, 2020, 2021 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2016 Lukas Gradl <lgradl@openmailbox.org>
;;; Copyright © 2016 David Craven <david@craven.ch>
;;; Copyright © 2016, 2019, 2020, 2022 Marius Bakke <marius@gnu.org>
;;; Copyright © 2016, 2018, 2019, 2021 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2017 Corentin Bocquillon <corentin@nybble.fr>
;;; Copyright © 2017 Gregor Giesen <giesen@zaehlwerk.net>
;;; Copyright © 2017 Frederick M. Muriithi <fredmanglis@gmail.com>
;;; Copyright © 2017 Nikita <nikita@n0.is>
;;; Copyright © 2017–2019, 2022 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2018 Joshua Sierles, Nextjournal <joshua@nextjournal.com>
;;; Copyright © 2020 Martin Becze <mjbecze@riseup.net>
;;; Copyright © 2020 Alexandros Theodotou <alex@zrythm.org>
;;; Copyright © 2023 Alexey Abramov <levenson@mmer.org>
;;; Copyright © 2023 Sharlatan Hellseher <sharlatanus@gmail.com>
;;; Copyright © 2023 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2023 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

(define-module (gnu packages serialization)
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (guix packages)
  #:use-module (guix gexp)
  #:use-module (guix download)
  #:use-module (guix hg-download)
  #:use-module (guix git-download)
  #:use-module (guix utils)
  #:use-module (guix build-system cmake)
  #:use-module (guix build-system copy)
  #:use-module (guix build-system gnu)
  #:use-module (guix build-system meson)
  #:use-module (guix build-system pyproject)
  #:use-module (guix build-system python)
  #:use-module (gnu packages)
  #:use-module (gnu packages autotools)
  #:use-module (gnu packages base)
  #:use-module (gnu packages bash)
  #:use-module (gnu packages boost)
  #:use-module (gnu packages check)
  #:use-module (gnu packages compression)
  #:use-module (gnu packages cmake)
  #:use-module (gnu packages cpp)
  #:use-module (gnu packages databases)
  #:use-module (gnu packages documentation)
  #:use-module (gnu packages gcc)
  #:use-module (gnu packages llvm)
  #:use-module (gnu packages lua)
  #:use-module (gnu packages pkg-config)
  #:use-module (gnu packages python)
  #:use-module (gnu packages python-build)
  #:use-module (gnu packages python-check)
  #:use-module (gnu packages python-science)
  #:use-module (gnu packages python-xyz)
  #:use-module (gnu packages perl))

(define-public avro-cpp-1.9
  (package
    (name "avro-cpp")
    (version "1.9.2")
    (source (origin
              (method url-fetch)
              (uri (string-append
                    "https://archive.apache.org/dist/avro/avro-" version
                    "/avro-src-" version ".tar.gz"))
              (sha256
               (base32 "0i3fpm7r72yw397qc8yw9ybzk2mxjkv0yk5hnn00ylc1wbd0np73"))))
    (build-system cmake-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'chdir
           (lambda _ (chdir "lang/c++"))))))
    (inputs
     (list boost snappy))
    (home-page "https://avro.apache.org/")
    (synopsis "Data serialization system")
    (description "Apache Avro is a data serialization system.  Avro provides:
@enumerate
@item Rich data structures;
@item a compact, fast, binary data format;
@item a container file, to store persistent data;
@item remote procedure call (RPC); and
@item simple integration with dynamic languages.
@end enumerate

Code generation is not required to read or write data files nor to use or
implement RPC protocols.")
    (license license:asl2.0)))

(define-public avro-cpp-1.9-for-irods
  (package
    (inherit avro-cpp-1.9)
    (properties `((hidden? . #true)))
    (arguments
     `(#:configure-flags
       '("-DCMAKE_CXX_COMPILER=clang++"
         "-DCMAKE_CXX_FLAGS=-stdlib=libc++"
         "-DCMAKE_EXE_LINKER_FLAGS=-lc++abi -lz")
       #:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'chdir
           (lambda _ (chdir "lang/c++")))
         (add-after 'set-paths 'adjust-CPLUS_INCLUDE_PATH
           (lambda* (#:key inputs #:allow-other-keys)
             (let ((gcc (assoc-ref inputs  "gcc")))
               (setenv "CPLUS_INCLUDE_PATH"
                       (string-join
                        (cons* (search-input-directory inputs "include/c++/v1")
                               ;; Hide GCC's C++ headers so that they do not interfere with
                               ;; the Clang headers.
                               (delete (string-append gcc "/include/c++")
                                       (string-split (getenv "CPLUS_INCLUDE_PATH")
                                                     #\:)))
                        ":"))
               (format #true
                       "environment variable `CPLUS_INCLUDE_PATH' changed to ~a~%"
                       (getenv "CPLUS_INCLUDE_PATH"))))))))
    (inputs
     `(("boost" ,boost-for-irods)
       ("clang" ,clang-toolchain-6)
       ("libcxx+libcxxabi" ,libcxx+libcxxabi-6)
       ("libcxxabi" ,libcxxabi-6)
       ("snappy" ,snappy-with-clang6)
       ("zlib" ,zlib)))))

(define-public cereal
  (package
    (name "cereal")
    (version "1.3.2")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/USCiLab/cereal")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32
         "02sd90ynya7wg013zwzjr79fsv4bzqgfg9l2mapd4j38rv06gahx"))))
    (build-system cmake-build-system)
    (arguments
     (list
      #:configure-flags #~'("-DSKIP_PORTABILITY_TEST=ON"
                            ;; Don't bother building the sandbox examples.
                            "-DSKIP_PERFORMANCE_COMPARISON=ON"
                            "-DBUILD_SANDBOX=OFF")
      #:phases
      #~(modify-phases %standard-phases
          (add-after 'install 'install-doc
            (lambda _
              (let ((doc (string-append #$output "/share/doc/html")))
                (invoke "make" "doc")
                (mkdir-p doc)
                (copy-recursively "doc/html" doc)))))))
    (native-inputs
     (list doxygen gcc-10))
    (home-page "https://uscilab.github.io/cereal/")
    (synopsis "C++11 library for serialization")
    (description
     "Cereal is a header-only C++11 serialization library.  Cereal takes
arbitrary data types and reversibly turns them into different representations,
such as compact binary encodings, XML, or JSON.")
    ;; Note: Cereal bundles forked versions of rapidxml and rapidjson
    ;; (see include/cereal/external/), so list their licenses too.
    (license (list license:bsd-3        ;Cereal itself
                   ;; The bundled RapidXML is dual Boost/Expat (users choice).
                   ;; RapidJSON is Expat licensed, and further bundles a
                   ;; stdint.h with BSD-3.
                   license:boost1.0 license:expat
                   ;; Finally, include/cereal/external/base64.hpp has a
                   ;; home-grown BSD-like license.
                   (license:non-copyleft
                    "file://include/cereal/external/LICENSE")))))

;; Some packages fail with the latest version.  Remove this variable
;; when unused.
(define-public cereal-1.3.0
  (package
    (inherit cereal)
    (version "1.3.0")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/USCiLab/cereal")
             (commit (string-append "v" version))))
       (file-name (git-file-name "cereal" version))
       (sha256
        (base32
         "0hc8wh9dwpc1w1zf5lfss4vg5hmgpblqxbrpp1rggicpx9ar831p"))
       (snippet
        '(delete-file "unittests/doctest.h"))))
    (arguments
     (substitute-keyword-arguments (package-arguments cereal)
       ((#:configure-flags flags #~'())
        #~'("-DSKIP_PORTABILITY_TEST=ON" "-DWITH_WERROR=OFF"))
       ((#:phases phases #~%standard-phases)
        #~(modify-phases #$phases
            (add-after 'unpack 'update-doctest
              (lambda* (#:key inputs #:allow-other-keys)
                (install-file (search-input-file inputs "unittests/doctest.h")
                              "unittests/")))
            (add-before 'configure 'skip-sandbox
              (lambda _
                (substitute* "CMakeLists.txt"
                  (("add_subdirectory\\(sandbox\\)") ""))))))))
    (native-inputs
     (list doxygen gcc-10
           (package-source cereal)))))

(define-public msgpack-c
  (package
    (name "msgpack-c")
    (version "6.0.0")
    (source
     (origin
       (method url-fetch)
       (uri
        (string-append
         "https://github.com/msgpack/msgpack-c/releases/download/"
         "c-" version "/" name "-" version ".tar.gz"))
       (sha256
        (base32 "1fmf08babfsjq5qkgw034wk2nw6mayxp1qlkm7h55p2jqvigam1n"))
       (snippet
        '(let ((p (open-file "msgpack-c.pc.in" "a")))
           (display "Requires: zlib\n" p)
           (close-output-port p)))))
    (build-system cmake-build-system)
    (arguments (list #:configure-flags #~(list "-DMSGPACK_BUILD_TESTS=ON")))
    (native-inputs (list googletest))
    (propagated-inputs (list zlib))  ;zbuffer.h includes zlib.h
    (home-page "https://www.msgpack.org")
    (synopsis "Binary serialization library")
    (description "Msgpack is a library for C that implements binary
serialization.")
    (license license:boost1.0)))

(define-public msgpack-cxx
  (package
    (inherit msgpack-c)
    (name "msgpack-cxx")
    (version "6.1.0")
    (source
     (origin
       (method url-fetch)
       (uri
        (string-append
         "https://github.com/msgpack/msgpack-c/releases/download/"
         "cpp-" version "/" name "-" version ".tar.gz"))
       (sha256
        (base32 "1rrrf3nskcv994z3pbq6a5z2021piz118rccmm1y7zlf7klygv93"))))
    (build-system cmake-build-system)
    (propagated-inputs (list boost zlib)) ;included in headers
    (description "Msgpack is a library for C++ that implements binary
serialization.")))

;;; The msgpack package was split into msgpack-c and msgpack-cxx starting from
;;; version 4.0.0.
(define-public msgpack
  (deprecated-package "msgpack" msgpack-c))

(define-public msgpack-3
  (package
    (inherit msgpack-c)
    (name "msgpack")
    (version "3.3.0")
    (source
     (origin
       (method url-fetch)
       (uri
        (string-append
         "https://github.com/msgpack/msgpack-c/releases/download/"
         "cpp-" version "/msgpack-" version ".tar.gz"))
       (snippet
        '(let ((p (open-file "msgpack.pc.in" "a")))
           (display
            (string-append "Requires: " "zlib" "\n") p)
           (close-output-port p)))
       (sha256
        (base32 "0yzhq50ijvwrfkr97knhvn54lj3f4hr3zy39yq8wpf6xll94s4bf"))))
    (native-inputs (list googletest-1.8))
    (description "Msgpack is a library for C/C++ that implements binary
serialization.  This is the legacy version that predates the split into C and
C++ specific packages.")))

(define-public libmpack
  (package
    (name "libmpack")
    (version "1.0.5")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/tarruda/libmpack")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
        (base32 "0rai5djdkjz7bsn025k5489in7r1amagw1pib0z4qns6b52kiar2"))))
    (build-system gnu-build-system)
    (arguments
     `(#:test-target "test"
       #:make-flags
       (list "CC=gcc"
             (string-append "PREFIX=" (assoc-ref %outputs "out")))
       #:phases
       (modify-phases %standard-phases
         (delete 'configure))))
    (native-inputs
     (list libtool))
    (home-page "https://github.com/tarruda/libmpack")
    (synopsis "Small binary serialization library")
    (description "Libmpack is a small binary serialization and RPC library
that implements both the msgpack and msgpack-rpc specifications.")
    (license license:expat)))

(define-public lua-libmpack
  (package (inherit libmpack)
    (name "lua-libmpack")
    (version "1.0.8")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/libmpack/libmpack-lua")
             (commit version)))
       (file-name (git-file-name name version))
       (sha256
        (base32 "1ijvzgq5hvib03w5rghv31wi7byamwg7qdx5pawvhvnflaii8ivw"))))
    (build-system gnu-build-system)
    (arguments
     `(;; FIXME: tests require "busted", which is not yet available in Guix.
       #:tests? #f
       #:test-target "test"
       #:make-flags
       (let* ((lua-version ,(package-version lua))
              (lua-major+minor ,(version-major+minor (package-version lua))))
         (list "CC=gcc"
               "FETCH=echo"  ; don't fetch anything from the web
               "UNTGZ=echo"  ; and don't try to unpack it
               "USE_SYSTEM_LUA=yes"
               (string-append "MPACK_LUA_VERSION=" lua-version)
               (string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
               (string-append "PREFIX="
                              (assoc-ref %outputs "out"))
               (string-append "LUA_CMOD_INSTALLDIR="
                              (assoc-ref %outputs "out")
                              "/lib/lua/" lua-major+minor)))
       #:phases
       (modify-phases %standard-phases
         (delete 'configure)
         (add-after 'unpack 'unpack-mpack-sources
           (lambda* (#:key inputs #:allow-other-keys)
             ;; This is broken because mpack-src is not a file, but all
             ;; prerequisites are added to the inputs of the gcc invocation.
             (substitute* "Makefile"
               (("\\$\\(MPACK\\): mpack-src") "$(MPACK): "))
             (copy-recursively (assoc-ref inputs "libmpack")
                               "mpack-src")
             #t)))))
    (inputs
     (list lua))
    (native-inputs
     `(("pkg-config" ,pkg-config)
       ("libmpack" ,(package-source libmpack))))
    (home-page "https://github.com/libmpack/libmpack-lua")
    (synopsis "Lua bindings for the libmpack binary serialization library")))

(define-public lua5.1-libmpack
  (package/inherit lua-libmpack
    (name "lua5.1-libmpack")
    (arguments
     (substitute-keyword-arguments (package-arguments lua-libmpack)
       ((#:make-flags flags)
        `(let* ((lua-version ,(package-version lua-5.1))
                (lua-major+minor ,(version-major+minor (package-version lua-5.1))))
           (list "CC=gcc"
                 "USE_SYSTEM_LUA=yes"
                 (string-append "MPACK_LUA_VERSION=" lua-version)
                 (string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
                 (string-append "PREFIX="
                                (assoc-ref %outputs "out"))
                 (string-append "LUA_CMOD_INSTALLDIR="
                                (assoc-ref %outputs "out")
                                "/lib/lua/" lua-major+minor))))))
    (inputs
     `(("lua" ,lua-5.1)))))

(define-public lua5.2-libmpack
  (package/inherit lua-libmpack
    (name "lua5.2-libmpack")
    (arguments
     (substitute-keyword-arguments (package-arguments lua-libmpack)
       ((#:make-flags flags)
        `(let* ((lua-version ,(package-version lua-5.2))
                (lua-major+minor ,(version-major+minor (package-version lua-5.2))))
           (list "CC=gcc"
                 "USE_SYSTEM_LUA=yes"
                 (string-append "MPACK_LUA_VERSION=" lua-version)
                 (string-append "MPACK_LUA_VERSION_NOPATCH=" lua-major+minor)
                 (string-append "PREFIX="
                                (assoc-ref %outputs "out"))
                 (string-append "LUA_CMOD_INSTALLDIR="
                                (assoc-ref %outputs "out")
                                "/lib/lua/" lua-major+minor))))))
    (inputs
     `(("lua" ,lua-5.2)))))

(define-public libyaml
  (package
    (name "libyaml")
    (version "0.2.5")
    (source
     (origin
       (method url-fetch)
       (uri (string-append "https://pyyaml.org/download/libyaml/yaml-"
                           version ".tar.gz"))
       (sha256
        (base32
         "1x4fcw13r3lqy8ndydr3ili87wicplw2awbcv6r21qgyfndswhn6"))))
    (build-system gnu-build-system)
    (arguments
     '(#:configure-flags '("--disable-static")))
    (home-page "https://pyyaml.org/wiki/LibYAML")
    (synopsis "YAML 1.1 parser and emitter written in C")
    (description
     "LibYAML is a YAML 1.1 parser and emitter written in C.")
    (license license:expat)))

(define-public libyaml+static
  (package
    (inherit libyaml)
    (name "libyaml+static")
    (arguments
     '(#:configure-flags '("--enable-static")))))

(define-public libcyaml
  (package
    (name "libcyaml")
    (version "1.3.1")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/tlsa/libcyaml")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (patches (search-patches "libcyaml-libyaml-compat.patch"))
       (sha256
        (base32 "0gvf3h8r8300wdwfjgxw3nzlj7w14q63m67p8wdm5fvpha017n4y"))))
    (build-system gnu-build-system)
    (arguments
     `(#:test-target "test"
       #:make-flags
       (list (string-append "PREFIX=" (assoc-ref %outputs "out"))
             (string-append "CC=" ,(cc-for-target)))
       #:phases
       (modify-phases %standard-phases
         (delete 'configure))))         ; no configure script
    (inputs
     (list libyaml))
    (native-inputs
     (list pkg-config))
    (synopsis "C library for reading and writing YAML")
    (description
     "LibCYAML is a C library written in ISO C11 for reading and writing
structured YAML documents.  The fundamental idea behind CYAML is to allow
applications to construct schemas which describe both the permissible
structure of the YAML documents to read/write, and the C data structure(s)
in which the loaded data is arranged in memory.")
    (home-page "https://github.com/tlsa/libcyaml")
    (license license:isc)))

(define-public libfyaml
  (package
    (name "libfyaml")
    (version "0.8")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/pantoniou/libfyaml")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32 "002g0grddfi5y42lq06zj8266rf7h27wq76sr598ad5pxllx3y3g"))))
    (build-system gnu-build-system)
    (native-inputs
     (list autoconf
           automake
           libtool
           pkg-config))
    (home-page "https://github.com/pantoniou/libfyaml")
    (synopsis "YAML version 1.2 and JSON parser and writer")
    (description "Libfyaml is a YAML parser and emitter, supporting the latest
YAML spec and passing the full YAML testsuite.  It is designed to be very
efficient, avoiding copies of data, and has no artificial limits like the 1024
character limit for implicit keys.")
    (license license:expat)))

(define-public yaml-cpp
  (package
    (name "yaml-cpp")
    (version "0.6.3")
    (source
     (origin
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/jbeder/yaml-cpp")
             (commit (string-append "yaml-cpp-" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32 "0ykkxzxcwwiv8l8r697gyqh1nl582krpvi7m7l6b40ijnk4pw30s"))))
    (build-system cmake-build-system)
    (arguments
     '(#:configure-flags '("-DYAML_BUILD_SHARED_LIBS=ON")))
    (native-inputs
     (list python))
    (home-page "https://github.com/jbeder/yaml-cpp")
    (synopsis "YAML parser and emitter in C++")
    (description "YAML parser and emitter in C++ matching the YAML 1.2 spec.")
    (license license:bsd-3)))

(define-public jsoncpp
  (package
    (name "jsoncpp")
    (version "1.9.5")
    (home-page "https://github.com/open-source-parsers/jsoncpp")
    (source (origin
              (method git-fetch)
              (uri (git-reference (url home-page) (commit version)))
              (file-name (git-file-name name version))
              (sha256
               (base32
                "06zss7z56ykzwcsfdxarmini63hkf8i8gx70q3yw9wb0bw7wj9rv"))))
    (build-system meson-build-system)
    (synopsis "C++ library for interacting with JSON")
    (description "JsonCpp is a C++ library that allows manipulating JSON values,
including serialization and deserialization to and from strings.  It can also
preserve existing comment in unserialization/serialization steps, making
it a convenient format to store user input files.")
    (license license:expat)))

;; Tensorflow does not build with jsoncpp 1.8.x.  It is built with commit
;; 4356d9bba191e1e16ce7a92073cbf3e63564e973, which lies between version 1.7.2
;; and 1.7.3.
(define-public jsoncpp-for-tensorflow
  (package (inherit jsoncpp)
    (name "jsoncpp")
    (version "1.7.3")
    (source (origin
              (method git-fetch)
              (uri (git-reference
                    (url "https://github.com/open-source-parsers/jsoncpp")
                    (commit version)))
              (file-name (git-file-name name version))
              (sha256
               (base32
                "1180ln8blrb0mwzpcf78k49hlki6di65q77rsvglf83kfcyh4d7z"))))
    (build-system cmake-build-system)
    (arguments
     (list #:configure-flags
           #~'("-DBUILD_SHARED_LIBS:BOOL=YES"
               #$@(if (%current-target-system)
                      #~("-DJSONCPP_WITH_POST_BUILD_UNITTEST=OFF")
                      #~()))))))

(define-public json.sh
  (let ((commit "0d5e5c77365f63809bf6e77ef44a1f34b0e05840") ;no releases
        (revision "1"))
    (package
      (name "json.sh")
      (version (git-version "0.0.0" revision commit))
      (source
       (origin
         (method git-fetch)
         (uri (git-reference
               (url "https://github.com/dominictarr/JSON.sh")
               (commit commit)))
         (file-name (git-file-name name version))
         (sha256
          (base32
           "14lxvp5xbdk0dcwkjbdp098z1108j8z48zaibndh4i731kkcz43i"))))
      (build-system copy-build-system)
      (arguments
       `(#:install-plan '(("JSON.sh" "bin/"))
         #:phases
         (modify-phases %standard-phases
           (add-before 'install 'check
             (lambda* (#:key tests? #:allow-other-keys)
               (when tests? (invoke "./all-tests.sh"))
               #t))
           (add-after 'install 'wrap-program
             (lambda* (#:key inputs outputs #:allow-other-keys)
               (wrap-program (string-append (assoc-ref outputs "out") "/bin/JSON.sh")
                 `("PATH" ":" prefix
                   (,(string-join
                     (map (lambda (in) (string-append (assoc-ref inputs in) "/bin"))
                          '("grep" "sed"))
                      ":"))))
                #t)))))
      (inputs
       (list bash-minimal grep sed))
      (synopsis "Pipeable JSON parser written in shell")
      (description
        "This package provides a JSON parser written in shell, compatible with
ash, Bash, Dash and Zsh.  Pipe JSON to it, and it traverses the JSON objects
and prints out the path to the current object (as a JSON array) and then the
object, without whitespace.")
      (home-page "https://github.com/dominictarr/JSON.sh")
      (license (list license:expat license:asl2.0))))) ;dual-licensed

(define-public capnproto
  (package
    (name "capnproto")
    (version "1.0")
    (source (origin
              (method url-fetch)
              (uri (string-append
                    "https://capnproto.org/capnproto-c++-"
                    version ".tar.gz"))
              (sha256
               (base32
                "03f1862ljdshg7d0rg3j7jzgm3ip55kzd2y91q7p0racax3hxx6i"))))
    (build-system gnu-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (add-before 'check 'use-tmp-for-temporary-files
           (lambda _
             ;; Use /tmp for temporary files, as the default /var/tmp directory
             ;; doesn't exist.
             (substitute* "src/kj/filesystem-disk-test.c++"
               (("VAR\\_TMP \"/var/tmp\"")
                "VAR_TMP \"/tmp\"")))))))
    (home-page "https://capnproto.org")
    (synopsis "Capability-based RPC and serialization system")
    (description
     "Cap'n Proto is a very fast data interchange format and capability-based
RPC system.  Think JSON, except binary.  Or think Protocol Buffers, except faster.")
    (license license:expat)))

(define-public python-msgspec
  (package
    (name "python-msgspec")
    (version "0.16.0")
    (source (origin
              ;; There are no tests in the PyPI tarball.
              (method git-fetch)
              (uri (git-reference
                    (url "https://github.com/jcrist/msgspec")
                    (commit version)))
              (file-name (git-file-name name version))
              (modules '((guix build utils)))
              (snippet
               ;; Delete autogenerated file, regenerate in a phase.
               '(begin
                  (delete-file "msgspec/atof_consts.h")))
              (sha256
               (base32
                "09q567klcv7ly60w9lqip2ffyhrij100ky9igh3p3vqwbml33zb3"))))
    (build-system pyproject-build-system)
    (arguments
     (list
      ;; Disable only one failing test.
      ;;
      ;; AssertionError: msgspec/structs.pyi:7: error: Positional-only
      ;; parameters are only supported in Python 3.8 and greater
      #:test-flags #~(list "-k" "not test_mypy")
      #:phases #~(modify-phases %standard-phases
                   (add-after 'unpack 'versioneer
                     (lambda _
                       (invoke "versioneer" "install")
                       (substitute* "setup.py"
                         (("version=versioneer.get_version\\(),")
                          (format #f "version=~s," #$version)))))
                   (add-after 'versioneer 'atof-consts
                     (lambda _
                       (with-directory-excursion "scripts"
                         ;; Regenerate the autogenerated file.
                         (invoke "python" "generate_atof_consts.py")))))))
    (native-inputs (list python-attrs
                         python-gcovr
                         python-msgpack
                         python-mypy
                         python-pytest
                         python-setuptools-scm
                         python-versioneer))
    (propagated-inputs (list python-pyyaml python-tomli python-tomli-w))
    (home-page "https://jcristharif.com/msgspec/")
    (synopsis "Fast serialization/validation library")
    (description "@code{msgspec} is a fast serialization and validation
library, with builtin support for JSON, MessagePack, YAML, and TOML.  It
includes the following features:

@itemize
@item High performance encoders/decoders for common protocols.
@item Support for a wide variety of Python types.
@item Zero-cost schema validation using familiar Python type annotations.
@item A speedy Struct type for representing structured data.
@end itemize")
    ;; XXX: It might support more architectures but GitHub Actions listed only
    ;; two right now. Try to build for the rest supported by Guix.  See:
    ;; https://github.com/jcrist/msgspec/blob/main/.github/workflows/ci.yml#L83
    (supported-systems (list "x86_64-linux" "aarch64-linux"))
    (license license:bsd-3)))

(define-public python-ruamel.yaml
  (package
    (name "python-ruamel.yaml")
    (version "0.16.13")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "ruamel.yaml" version))
       (sha256
        (base32
         "0hm9yg785f46bkrgqknd6fdvmkby9dpzjnm0b63qf0i748acaj5v"))))
    (build-system python-build-system)
    (native-inputs
     (list python-pytest))
    (propagated-inputs
     (list python-ruamel.yaml.clib))
    (arguments
     `(;; TODO: Tests require packaging "ruamel.std.pathlib".
       #:tests? #f))
    (home-page "https://sourceforge.net/projects/ruamel-yaml/")
    (synopsis "YAML 1.2 parser/emitter")
    (description
     "This package provides YAML parser/emitter that supports roundtrip
preservation of comments, seq/map flow style, and map key order.  It
is a derivative of Kirill Simonov’s PyYAML 3.11.  It supports YAML 1.2
and has round-trip loaders and dumpers.  It supports comments.  Block
style and key ordering are kept, so you can diff the source.")
    (license license:expat)))

(define-public python-ruamel.yaml.clib
  (package
    (name "python-ruamel.yaml.clib")
    (version "0.2.6")
    (source
      (origin
        ;; pypi release code has cythonized code without corresponding source.
        (method hg-fetch)
        (uri (hg-reference
               (url "http://hg.code.sf.net/p/ruamel-yaml-clib/code")
               (changeset version)))
        (file-name (string-append name "-" version "-checkout"))
        (sha256
         (base32
          "05m3y7pjfbaarqbbgw1k6gs6cnnmxnwadjipxvw1aaaqk3s236cs"))
        (modules '((guix build utils)))
        (snippet
         '(begin
            (delete-file "_ruamel_yaml.c")))))
    (build-system python-build-system)
    (arguments
     `(#:tests? #f  ; This package is split from python-ruamel.yaml and
                    ; depends on modules from it for the test suite.
       #:phases
       (modify-phases %standard-phases
         (delete 'sanity-check) ; Depends on python-ruamel.yaml
         (add-after 'unpack 'cythonize-code
           (lambda _
             (invoke "cython" "_ruamel_yaml.pyx"))))))
    (native-inputs
     (list python-cython))
    (home-page "https://sourceforge.net/p/ruamel-yaml-clib/code/ci/default/tree")
    (synopsis "C version of reader, parser and emitter for ruamel.yaml")
    (description
     "This package provides a C version of the reader, parser and emitter for
@code{ruamel.yaml} derived from libyaml.")
    (license license:expat)))

(define-public python-cbor
  (package
    (name "python-cbor")
    (version "1.0.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "cbor" version))
       (sha256
        (base32
         "1dmv163cnslyqccrybkxn0c9s1jk1mmafmgxv75iamnz5lk5l8hk"))))
    (build-system python-build-system)
    (home-page "https://bitbucket.org/bodhisnarkva/cbor")
    (synopsis "Implementation of the Concise Binary Object Representation")
    (description
     "Python-cbor provides an implementation of the Concise Binary Object
Representation (@dfn{CBOR}).  CBOR is comparable to JSON, has a superset of
JSON's ability, but serializes to a binary format which is smaller and faster
to generate and parse.  The two primary functions are @code{cbor.loads} and
@code{cbor.dumps}.")
    (license license:asl2.0)))

(define-public flatbuffers
  (package
    (name "flatbuffers")
    (version "2.0.0")
    (source
      (origin
        (method git-fetch)
        (uri (git-reference
              (url "https://github.com/google/flatbuffers")
              (commit (string-append "v" version))))
        (file-name (git-file-name name version))
        (sha256
         (base32
          "1zbf6bdpps8369r1ql00irxrp58jnalycc8jcapb8iqg654vlfz8"))))
    (build-system cmake-build-system)
    (arguments
     '(#:build-type "Release"
       #:configure-flags
       (list "-DFLATBUFFERS_BUILD_SHAREDLIB=ON"
             (string-append "-DCMAKE_INSTALL_LIBDIR="
                            (assoc-ref %outputs "out") "/lib"))
       #:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'make-writable
           (lambda _ (for-each make-file-writable (find-files ".")))))))
    (home-page "https://google.github.io/flatbuffers/")
    (synopsis "Memory-efficient serialization library")
    (description "FlatBuffers is a cross-platform serialization library for C++,
C#, C, Go, Java, JavaScript, PHP, and Python.  It was originally created for
game development and other performance-critical applications.")
    (license license:asl2.0)))

(define-public flatbuffers-next
  (package
    (inherit flatbuffers)
    (version "23.1.21")
    (source (origin
              (method git-fetch)
              (uri (git-reference
                    (url "https://github.com/google/flatbuffers")
                    (commit (string-append "v" version))))
              (file-name (git-file-name "flatbuffers" version))
              (sha256
               (base32
                "1z3a6l8g2y53i5xzraswfs2i0i3kk52zv7nzc2q3fgisbyiri3pz"))))))

(define-public python-feather-format
  (package
    (name "python-feather-format")
    (version "0.4.1")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "feather-format" version))
        (sha256
         (base32
          "00w9hwz7sj3fkdjc378r066vdy6lpxmn6vfac3qx956k8lvpxxj5"))))
    (build-system python-build-system)
    (propagated-inputs
     (list python-pandas python-pyarrow))
    (home-page "https://github.com/wesm/feather")
    (synopsis "Python wrapper to the Feather file format")
    (description "This package provides a Python wrapper library to the
Apache Arrow-based Feather binary columnar serialization data frame format.")
    (license license:asl2.0)))

debug log:

solving 9f2aab250e ...
found 9f2aab250e in https://yhetil.org/guix/c03c2aa247e94c24385a2765cc5b6c6352d9696b.1692382380.git.maxim.cournoyer@gmail.com/
found 9c114aaf39 in https://git.savannah.gnu.org/cgit/guix.git
preparing index
index prepared:
100644 9c114aaf390870b2a87d4bfa2e9c353849646810	gnu/packages/serialization.scm

applying [1/1] https://yhetil.org/guix/c03c2aa247e94c24385a2765cc5b6c6352d9696b.1692382380.git.maxim.cournoyer@gmail.com/
diff --git a/gnu/packages/serialization.scm b/gnu/packages/serialization.scm
index 9c114aaf39..9f2aab250e 100644

Checking patch gnu/packages/serialization.scm...
Applied patch gnu/packages/serialization.scm cleanly.

index at:
100644 9f2aab250ed4948b36726831e7ac811145474eec	gnu/packages/serialization.scm

(*) Git path names are given by the tree(s) the blob belongs to.
    Blobs themselves have no identifier aside from the hash of its contents.^

Code repositories for project(s) associated with this external index

	https://git.savannah.gnu.org/cgit/guix.git

This is an external index of several public inboxes,
see mirroring instructions on how to clone and mirror
all data and code used by this external index.