From: "Ludovic Courtès" <ludo@gnu.org>
To: guix-devel <guix-devel@gnu.org>
Subject: How long to compute a package derivation?
Date: Sun, 24 Nov 2019 22:44:12 +0100 [thread overview]
Message-ID: <87h82tx843.fsf@inria.fr> (raw)
[-- Attachment #1: Type: text/plain, Size: 1608 bytes --]
Hello Guix!
I wanted to time ‘package-derivation’ for each package, to see if there
were any outliers. I came up with the attached script, which led to the
attached result; here’s an excerpt, showing the most “expensive” package
derivations (measurements performed on an i7 laptop with only one run
each, so take with a grain of salt):
--8<---------------cut here---------------start------------->8---
4.93 ("pigx" . "0.0.3")
4.55 ("wine64-staging" . "4.18")
3.96 ("pigx-scrnaseq" . "0.0.8")
3.88 ("pigx-chipseq" . "0.0.41")
3.84 ("dxvk" . "1.4.4")
3.68 ("pigx-rnaseq" . "0.0.10")
3.67 ("wine64" . "4.0.2")
3.42 ("pigx-bsseq" . "0.0.10")
3.03 ("emacs-tide" . "3.2.3")
2.95 ("diffoscope" . "129")
2.91 ("kdenlive" . "18.08.1")
2.89 ("libkomparediff2" . "19.04.1")
2.83 ("kdevelop" . "5.1.2")
--8<---------------cut here---------------end--------------->8---
That doesn’t necessarily reveal anything surprising. For example, pigx
has 1,316 nodes in its package graph, which map to almost 5K nodes in
the derivation graph, so no wonder it takes time.
For “win64” and “win64-staging”, I found that we’re dragging all of the
i686 nodes, hence the cost: <https://issues.guix.gnu.org/issue/38336>.
Now, this list gives us timing, but not outliers. What would be
interesting to see is the time normalized by the number of nodes in the
package graph, for instance.
Anyway, perhaps if you look at the ranking of your favorite packages,
you’ll find that something’s fishy, who knows.
Thanks,
Ludo’.
[-- Attachment #2: the script --]
[-- Type: text/plain, Size: 2570 bytes --]
(use-modules (guix inferior)
(srfi srfi-1)
(srfi srfi-19)
(ice-9 match)
(ice-9 format)
(guix store)
(guix progress))
(define %timings (make-hash-table))
;; (define (package->derivation* package system . args)
;; (lambda (store)
;; (values (let ((start (current-time))
;; (drv (apply package-derivation store
;; package system args))
;; (stop (current-time)))
;; (hashq-set! %timings package
;; (time-difference stop start))
;; drv)
;; store)))
(define %inferior-directory
(string-append (getenv "HOME") "/.config/guix/current"))
(define (all-packages)
(let* ((inferior (open-inferior %inferior-directory))
(packages (inferior-available-packages inferior)))
(close-inferior inferior)
packages))
(define (time-package-derivation name version)
(with-store store
(let* ((inferior (open-inferior %inferior-directory))
(_ (inferior-eval '(begin
(use-modules (guix grafts))
(%graft? #f))
inferior))
(package (car (lookup-inferior-packages inferior name version)))
(start (current-time))
(drv (inferior-package-derivation store package))
(stop (current-time)))
(close-inferior inferior)
(hash-set! %timings (cons name version)
(time-difference stop start)))))
(define* (display-timings #:optional (port (current-output-port)))
(define alist
(hash-map->list cons %timings))
(for-each (match-lambda
((package . duration)
(format port "~5,2f ~s~%"
(+ (time-second duration)
(/ (time-nanosecond duration) 1e9))
package)))
(sort alist (match-lambda*
(((_ . d1) (_ . d2))
(time>? d1 d2))))))
(define (run-benchmark)
(let ((packages (all-packages)))
(call-with-progress-reporter (progress-reporter/bar (length packages))
(lambda (report)
(for-each (match-lambda
((name . version)
(time-package-derivation name version)
(report)))
packages)
(display-timings)))))
(sigaction SIGINT (lambda (_) (display-timings)))
(run-benchmark)
[-- Attachment #3: the timings --]
[-- Type: text/plain, Size: 400443 bytes --]
#+begin_example
$ guile ~/src/guix-debugging/prof-packages.scm
[##############################################################################] 4.93 ("pigx" . "0.0.3")
4.55 ("wine64-staging" . "4.18")
3.96 ("pigx-scrnaseq" . "0.0.8")
3.88 ("pigx-chipseq" . "0.0.41")
3.84 ("dxvk" . "1.4.4")
3.68 ("pigx-rnaseq" . "0.0.10")
3.67 ("wine64" . "4.0.2")
3.42 ("pigx-bsseq" . "0.0.10")
3.03 ("emacs-tide" . "3.2.3")
2.95 ("diffoscope" . "129")
2.91 ("kdenlive" . "18.08.1")
2.89 ("libkomparediff2" . "19.04.1")
2.83 ("kdevelop" . "5.1.2")
2.83 ("baloo" . "5.55.0")
2.83 ("kdelibs4support" . "5.55.0")
2.70 ("rcas-web" . "0.1.0")
2.69 ("gnome" . "3.30.2")
2.68 ("kdesignerplugin" . "5.55.0")
2.66 ("kross" . "5.55.0")
2.66 ("r-affycoretools" . "1.56.0")
2.65 ("kdeconnect" . "1.3.5")
2.65 ("kded" . "5.55.0")
2.64 ("krita" . "4.2.5")
2.64 ("ktouch" . "19.08.1")
2.63 ("kpmcore" . "3.3.0")
2.62 ("r-liger" . "0.4.2")
2.62 ("kxmlrpcclient" . "5.55.0")
2.60 ("kemoticons" . "5.55.0")
2.60 ("r-inspect" . "1.14.0")
2.60 ("kscreenlocker" . "5.15.1")
2.60 ("khtml" . "5.55.0")
2.59 ("kde-frameworkintegration" . "5.55.0")
2.59 ("kbookmarks" . "5.55.0")
2.57 ("kcachegrind" . "19.04.1")
2.57 ("kdesu" . "5.55.0")
2.57 ("krunner" . "5.55.0")
2.57 ("r-diffbind" . "2.12.0")
2.57 ("kactivities" . "5.55.0")
2.57 ("kpeople" . "5.55.0")
2.56 ("kdewebkit" . "5.55.0")
2.56 ("r-timeseriesexperiment" . "1.2.0")
2.56 ("ktexteditor" . "5.55.0")
2.55 ("kinit" . "5.55.0")
2.55 ("r-systempiper" . "1.18.2")
2.55 ("r-flowmeans" . "1.44.0")
2.55 ("libksysguard" . "5.15.1")
2.54 ("ktextwidgets" . "5.55.0")
2.53 ("r-abseqr" . "1.2.0")
2.53 ("r-rcas" . "1.10.1")
2.52 ("r-chipexoqual" . "1.8.0")
2.51 ("kdeclarative" . "5.55.0")
2.51 ("hedgewars" . "1.0.0")
2.51 ("fdroidserver" . "1.1.1")
2.50 ("mate" . "1.22.0")
2.50 ("kcmutils" . "5.55.0")
2.50 ("knotifyconfig" . "5.55.0")
2.50 ("r-clusterprofiler" . "3.12.0")
2.49 ("r-dexseq" . "1.30.0")
2.49 ("kio" . "5.55.0")
2.49 ("kxmlgui" . "5.55.0")
2.48 ("r-xbseq" . "1.16.0")
2.48 ("next" . "1.3.4")
2.46 ("r-reportingtools" . "2.24.0")
2.46 ("emacs-elpy" . "1.31.0")
2.43 ("kglobalaccel" . "5.55.0")
2.42 ("arcan-wayland" . "0.5.5.2-1.b4dd1fb")
2.39 ("nmoldyn" . "3.0.11")
2.39 ("r-radiant-data" . "1.0.6")
2.38 ("r-ggraph" . "2.0.0")
2.37 ("arcan-sdl" . "0.5.5.2-1.b4dd1fb")
2.36 ("r-enrichplot" . "1.4.0")
2.36 ("ungoogled-chromium" . "78.0.3904.97-0.acaf163")
2.36 ("r-cicero-monocle3" . "1.3.2-1.fa2fb65")
2.36 ("arc-theme" . "20190917")
2.35 ("emacs-ox-pandoc" . "20180510")
2.35 ("r-harmony" . "1.0-1.4d16538")
2.35 ("numix-theme" . "2.6.7")
2.35 ("r-irkernel" . "1.0.2")
2.34 ("r-velocyto" . "0.6-1.d779034")
2.34 ("pplacer" . "1.1.alpha19")
2.34 ("emacs-edbi-sqlite" . "0.1.1-1.52cb9ca")
2.34 ("raincat" . "1.2.1")
2.34 ("openshot" . "2.4.4")
2.33 ("r-soupx" . "0.3.1-1.a3354be")
2.33 ("ungoogled-chromium-wayland" . "78.0.3904.97-0.acaf163")
2.32 ("r-deseq2" . "1.24.0")
2.32 ("gaupol" . "1.6")
2.32 ("ghc-sdl2-mixer" . "1.1.0")
2.32 ("r-scde" . "1.99.2")
2.31 ("caja-extensions" . "1.22.0")
2.31 ("r-rgl" . "0.100.30")
2.30 ("virt-manager" . "2.2.1")
2.30 ("tetoolkit" . "2.0.3")
2.29 ("ngless" . "0.9.1")
2.29 ("r-linnorm" . "2.8.0")
2.29 ("icecat" . "68.2.0-guix0-preview3")
2.29 ("arcan" . "0.5.5.2-1.b4dd1fb")
2.29 ("ardour" . "5.12")
2.28 ("r-feature" . "1.2.13")
2.28 ("ghc-sdl2-image" . "2.0.0")
2.26 ("ffmpegthumbnailer" . "2.2.0")
2.26 ("audacity" . "2.3.2")
2.25 ("r-absfiltergsea" . "1.5.1")
2.24 ("spacefm" . "1.0.6")
2.23 ("geierlein" . "0.9.13")
2.22 ("qucs-s" . "0.0.21")
2.22 ("wine-staging" . "4.18")
2.21 ("trezor-agent" . "0.10.0")
2.21 ("gnome-tweaks" . "3.30.2")
2.21 ("r-learnr" . "0.10.0")
2.20 ("r-biosigner" . "1.12.0")
2.20 ("vapoursynth" . "48")
2.19 ("r-scone" . "1.8.0")
2.19 ("python-pygenometracks" . "2.0")
2.19 ("r-flexdashboard" . "0.5.1.1")
2.19 ("kodi" . "18.4")
2.19 ("xpra" . "2.5.3")
2.18 ("r-rqc" . "1.18.0")
2.18 ("calibre" . "3.42.0")
2.17 ("r-acc" . "1.3.3")
2.17 ("lxde" . "0.99.2")
2.17 ("python2-kivy" . "1.10.1")
2.17 ("atril" . "1.22.0")
2.16 ("ruby-iruby" . "0.3")
2.16 ("clipper" . "1.2.1")
2.16 ("kmediaplayer" . "5.55.0")
2.16 ("jami" . "20190319.4.a16a99f")
2.16 ("r-tidyverse" . "1.2.1")
2.16 ("r-biocstyle" . "2.12.0")
2.15 ("vlc" . "3.0.8")
2.15 ("kodi-wayland" . "18.4")
2.15 ("python-rpy2" . "3.0.4-1.19868a8")
2.15 ("r-knitrbootstrap" . "1.0.2")
2.15 ("kdevplatform" . "5.1.2")
2.14 ("r-monocle3" . "0.1.2")
2.13 ("plasma-framework" . "5.55.0")
2.13 ("r-pore" . "0.24")
2.13 ("imp" . "2.6.2")
2.13 ("hugin" . "2019.0.0")
2.13 ("python-hic2cool" . "0.4.2")
2.12 ("mate-control-center" . "1.22.0")
2.12 ("gess" . "1.0")
2.12 ("bs1770gain" . "0.6.0")
2.12 ("synfigstudio" . "1.2.2")
2.12 ("r-kableextra" . "1.1.0")
2.12 ("freecad" . "0.18.4")
2.12 ("poretools" . "0.6.0-1.e426b1f")
2.11 ("bap" . "1.6.0")
2.11 ("libreoffice" . "6.3.3.2")
2.11 ("emacs-skeletor" . "1.6.1-1.47c5b76")
2.11 ("knewstuff" . "5.55.0")
2.11 ("python2-plastid" . "0.4.8")
2.10 ("guix-jupyter" . "0.1.0")
2.10 ("couger" . "1.8.2")
2.10 ("umi-tools" . "1.0.0")
2.10 ("r-epi" . "2.38")
2.10 ("linuxdcpp" . "1.1.0")
2.10 ("python-scanpy" . "1.4")
2.10 ("gnome-shell" . "3.30.2")
2.10 ("qemu" . "4.1.0")
2.09 ("python2-biom-format" . "2.1.7")
2.09 ("r-parcor" . "0.2-6")
2.09 ("engrampa" . "1.22.0")
2.08 ("tadbit" . "0.2.0")
2.08 ("ribodiff" . "0.2.2")
2.08 ("renpy" . "7.3.5")
2.08 ("r-rmetasim" . "3.1.7")
2.08 ("r-abcrf" . "1.8.1")
2.07 ("python-pybedtools" . "0.8.0")
2.07 ("r-fivethirtyeight" . "0.1.0")
2.07 ("grit" . "2.0.5")
2.07 ("r-abn" . "2.1")
2.07 ("wlstream" . "0.0-1.182076a")
2.07 ("kactivities-stats" . "5.55.0")
2.07 ("kwallet" . "5.55.0")
2.06 ("dvdstyler" . "3.0.4")
2.06 ("virt-viewer" . "7.0")
2.06 ("ghc-sdl2" . "2.4.1.0")
2.05 ("deja-dup" . "34.3")
2.05 ("pbtranscript-tofu" . "2.2.3.8f5467f")
2.05 ("r-bayesplot" . "1.7.0")
2.05 ("supertux" . "0.6.0")
2.05 ("python2-pybedtools" . "0.8.0")
2.05 ("r-bookdown" . "0.15")
2.05 ("python-bbknn" . "1.3.1")
2.05 ("pyicoteo" . "2.0.7")
2.05 ("python2-checkm-genome" . "1.0.13")
2.05 ("qucs" . "0.0.19-0.b4f27d9")
2.05 ("miso" . "0.5.4")
2.04 ("wxsvg" . "1.5.12")
2.04 ("wine" . "4.0.2")
2.04 ("python-hicexplorer" . "2.1.4")
2.03 ("r-bayesm" . "3.1-4")
2.03 ("roguebox-adventures" . "2.2.1")
2.03 ("r-adaptivesparsity" . "1.6")
2.03 ("faudio" . "19.11")
2.03 ("fio" . "3.14")
2.03 ("readymedia" . "1.2.1")
2.03 ("r-rcpparmadillo" . "0.9.800.1.0")
2.03 ("python2-widgetsnbextension" . "3.4.2")
2.03 ("aubio" . "0.4.9")
2.02 ("nautilus" . "3.30.5")
2.02 ("r-reprex" . "0.3.0")
2.02 ("kservice" . "5.55.0")
2.01 ("r-compositions" . "1.40-3")
2.01 ("gnunet-gtk" . "0.10.1")
2.01 ("spice-gtk" . "0.37")
2.01 ("pcmanfm" . "1.3.1")
2.01 ("python-androguard" . "3.2.1")
2.01 ("r-extremes" . "2.0-10")
2.01 ("kparts" . "5.55.0")
2.00 ("python2-htseq" . "0.9.1")
2.00 ("emacs-org-web-tools" . "1.0")
2.00 ("clementine" . "1.3.1-2.4619a4c")
2.00 ("r-etm" . "1.0.5")
2.00 ("python-biom-format" . "2.1.7")
2.00 ("ocaml-tsdl" . "0.9.6")
1.99 ("rhythmbox" . "3.4.3")
1.99 ("idr" . "2.0.3")
1.99 ("lightdm-gtk-greeter" . "2.0.2")
1.99 ("r-lmoments" . "1.3-1")
1.99 ("python-plastid" . "0.4.8")
1.99 ("megaglest" . "3.13.0")
1.98 ("spice" . "0.14.2")
1.98 ("htseq" . "0.9.1")
1.98 ("pepr" . "1.0.9")
1.98 ("onionshare" . "2.2")
1.98 ("dolphin-emu" . "5.0-7.a974540")
1.98 ("r-variantfiltering" . "1.20.0")
1.98 ("slingshot" . "0.9")
1.98 ("gnunet" . "0.10.1")
1.97 ("flightgear" . "2018.3.2")
1.97 ("python2-renpy" . "7.3.5")
1.97 ("python2-ipywidgets" . "5.2.2")
1.97 ("r-riboprofiling" . "1.14.0")
1.97 ("opencv" . "3.4.3")
1.97 ("python2-ipython" . "5.8.0")
1.97 ("u-boot-vexpress-ca9x4" . "2019.04")
1.96 ("blender" . "2.79b")
1.96 ("python-slurm-magic" . "0.0-0.73dd1a2")
1.96 ("libring" . "20190319.4.a16a99f")
1.96 ("emacs-docker-compose-mode" . "1.1.0")
1.96 ("lollypop" . "1.2.7")
1.96 ("ocaml-utop" . "2.4.2")
1.96 ("openmw" . "0.45.0")
1.95 ("r-seurat" . "3.1.1")
1.95 ("picard" . "2.1.3")
1.95 ("openttd" . "1.9.3")
1.95 ("boinc-client" . "7.16.1")
1.95 ("python2-jupyter-console" . "5.2.0")
1.95 ("python-ipython-documentation" . "7.9.0")
1.94 ("python-keras" . "2.2.4")
1.94 ("eolie" . "0.9.63")
1.94 ("avogadro" . "1.2.0")
1.94 ("red-eclipse" . "1.6.0")
1.94 ("kdbusaddons" . "5.55.0")
1.94 ("kfilemetadata" . "5.55.0")
1.94 ("gnome-maps" . "3.30.3.1")
1.94 ("python-jupyter-protocol" . "0.1.1")
1.93 ("libextractor" . "1.9")
1.93 ("pianobar" . "2016.06.02")
1.93 ("tbsp" . "1.0.0-1.ec8fff4")
1.93 ("gparted" . "1.0.0")
1.93 ("looking-glass-client" . "a12-182c475")
1.93 ("python-jupyter-kernel-test" . "0.3")
1.93 ("tome4" . "1.6.0")
1.93 ("r-graphlayouts" . "0.5.0")
1.93 ("mame" . "0.215")
1.93 ("python2-xsge" . "2018.02.26")
1.92 ("r-flextable" . "0.5.6")
1.92 ("u-boot-wandboard" . "2019.04")
1.92 ("ocaml-markup" . "0.8.1")
1.92 ("python2-statsmodels" . "0.9.0")
1.92 ("python-kivy" . "1.10.1")
1.92 ("python-velocyto" . "0.17.17")
1.92 ("sway" . "1.2")
1.92 ("ocaml-expect" . "0.0.6")
1.92 ("mgba" . "0.7.3")
1.92 ("python-loompy" . "2.0.3")
1.92 ("python-wxpython" . "4.0.7.post1")
1.92 ("python2-fastlmm" . "0.2.21")
1.91 ("impressive" . "0.12.0")
1.91 ("python-matplotlib-documentation" . "3.1.1")
1.91 ("aegisub" . "3.2.2")
1.91 ("mygui" . "3.2.2")
1.91 ("guile-chickadee" . "0.4.0")
1.91 ("teeworlds" . "0.7.2")
1.91 ("handbrake" . "1.2.2")
1.91 ("u-boot-cubieboard" . "2019.04")
1.91 ("u-boot-puma-rk3399" . "2019.04")
1.91 ("maven" . "3.6.1")
1.91 ("r-yarn" . "1.10.0")
1.90 ("fifengine" . "0.4.2")
1.90 ("jupyter" . "1.0.0")
1.90 ("r-yapsa" . "1.10.0")
1.90 ("python2-scikit-image" . "0.14.2")
1.90 ("u-boot-mx6cuboxi" . "2019.04")
1.90 ("qsynth" . "0.5.7")
1.90 ("fizmo" . "0.8.5")
1.90 ("python-pyside-2-tools" . "v5.11.2-1.f1b7755")
1.90 ("abbaye" . "2.0.1")
1.90 ("python2-seaborn" . "0.9.0")
1.90 ("zbar" . "0.23")
1.90 ("qbittorrent" . "4.1.9.1")
1.90 ("python2-shapely" . "1.6.4.post2")
1.90 ("folks" . "0.11.4")
1.90 ("python2-pygame-sdl2" . "2.1.0-for-renpy-7.3.5")
1.90 ("r-a4" . "1.32.0")
1.90 ("papagayo" . "2.0b1-1.e143684b3")
1.90 ("python2-wxpython" . "3.0.2.0")
1.90 ("frotz-sdl" . "2.45pre")
1.90 ("r-bigmelon" . "1.10.0")
1.90 ("ocaml-tyxml" . "4.3.0")
1.90 ("ocaml-merlin" . "3.2.2")
1.89 ("wlroots" . "0.7.0")
1.89 ("openscenegraph" . "3.6.4")
1.89 ("electron-cash" . "4.0.7")
1.89 ("openscenegraph" . "3.4.1")
1.89 ("roary" . "3.12.0")
1.89 ("r-circus" . "0.1.5")
1.89 ("coq-equations" . "1.2")
1.89 ("u-boot-cubietruck" . "2019.04")
1.89 ("darktable" . "2.6.2")
1.89 ("moc" . "2.5.2")
1.89 ("colobot" . "0.1.12-alpha")
1.89 ("aseba" . "1.6.0-0.3b35de8")
1.89 ("freerdp" . "2.0.0-rc4")
1.89 ("balsa" . "2.5.7")
1.89 ("qjackctl" . "0.5.9")
1.88 ("r-rmarkdown" . "1.17")
1.88 ("lightdm" . "1.24.0")
1.88 ("gimp-resynthesizer" . "2.0.3")
1.88 ("r-cistopic" . "0.2.1-0.29abd8d")
1.88 ("u-boot-novena" . "2019.04")
1.88 ("emacs-edbi" . "0.1.3-1.6f50aaf")
1.88 ("python2-matplotlib-documentation" . "3.1.1")
1.88 ("easyrpg-player" . "0.6.0")
1.88 ("emacs-tuareg" . "2.2.0")
1.88 ("edgar" . "1.31")
1.88 ("python-jupyter-console" . "6.0.0")
1.88 ("evolution" . "3.30.5")
1.88 ("gzdoom" . "3.7.2")
1.88 ("golly" . "3.2")
1.87 ("0ad" . "0.0.23b-alpha")
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1.43 ("u-boot-firefly-rk3399" . "2019.10")
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0.22 ("perl-config-autoconf" . "0.317")
0.22 ("perl-term-readkey" . "2.37")
0.22 ("dtach" . "0.9")
0.22 ("libdvbpsi" . "1.3.2")
0.22 ("libnumbertext" . "1.0.5")
0.22 ("libpipeline" . "1.5.1")
0.22 ("libedit" . "20191025-3.1")
0.22 ("snapscreenshot" . "1.0.14.3")
0.22 ("jemalloc" . "5.2.0")
0.22 ("libbsd" . "0.9.1")
0.20 ("fluid-3" . "2.1")
0.20 ("gcc-toolchain" . "7.4.0")
0.19 ("ld-wrapper" . "0")
0.19 ("kbd-neo" . "2486")
0.03 ("bootstrap-binaries" . "0")
0.02 ("guile-bootstrap" . "2.0")
0.02 ("binutils-bootstrap" . "0")
0.01 ("gcc-bootstrap" . "0")
0.01 ("bootstrap-mescc-tools" . "0.5.2")
0.01 ("bootstrap-mes" . "0")
0.01 ("glibc-bootstrap" . "0")
0.01 ("linux-libre-headers-bootstrap" . "0")
$ guix describe
Generacio 116 Nov 18 2019 00:33:47 (nuna)
guix 9c9982d
repository URL: https://git.savannah.gnu.org/git/guix.git
branch: master
commit: 9c9982dc0c8c38ce3821b154b7e92509c1564317
#+end_example
next reply other threads:[~2019-11-24 21:44 UTC|newest]
Thread overview: 2+ messages / expand[flat|nested] mbox.gz Atom feed top
2019-11-24 21:44 Ludovic Courtès [this message]
2019-12-02 19:15 ` How long to compute a package derivation? zimoun
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