all messages for Guix-related lists mirrored at yhetil.org
 help / color / mirror / code / Atom feed
From: Ricardo Wurmus <rekado@elephly.net>
To: zimoun <zimon.toutoune@gmail.com>
Cc: 54787@debbugs.gnu.org
Subject: bug#54787: importer Bioconductor: no tarball, only Git
Date: Mon, 11 Apr 2022 18:15:39 +0200	[thread overview]
Message-ID: <874k2zzj9p.fsf@elephly.net> (raw)
In-Reply-To: <868rsf23th.fsf@gmail.com>


zimoun <zimon.toutoune@gmail.com> writes:

> $ guix import cran -a bioconductor CHETAH
> guix import: warning: failed to retrieve package information from https://cran.r-project.org/web/packages/CHETAH/DESCRIPTION: 404 (Not Found)
> guix import: error: failed to download description for package 'CHETAH'
>
> The reason is because there is no source package.  Only the Git source
> repo.

We should finally switch to fetching the sources from Git.  I wonder why
we haven’t done this earlier.

I guess we should do this gradually to avoid mass updates, so perhaps we
should introduce bioconductor-git-reference and switch over packages one
by one.

What do you think?

-- 
Ricardo




  reply	other threads:[~2022-04-11 16:20 UTC|newest]

Thread overview: 8+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2022-04-08 11:48 bug#54787: importer Bioconductor: no tarball, only Git zimoun
2022-04-11 16:15 ` Ricardo Wurmus [this message]
2022-04-12 16:25   ` zimoun
2022-04-14 11:43     ` Ricardo Wurmus
2022-04-14 12:59       ` zimoun
2022-04-14 13:57         ` Ricardo Wurmus
2022-04-14 15:03           ` zimoun
2022-04-14 14:04       ` Maxime Devos

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=874k2zzj9p.fsf@elephly.net \
    --to=rekado@elephly.net \
    --cc=54787@debbugs.gnu.org \
    --cc=zimon.toutoune@gmail.com \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this external index

	https://git.savannah.gnu.org/cgit/guix.git

This is an external index of several public inboxes,
see mirroring instructions on how to clone and mirror
all data and code used by this external index.