From: Sharlatan Hellseher <sharlatanus@gmail.com>
To: 69924@debbugs.gnu.org
Cc: Sharlatan Hellseher <sharlatanus@gmail.com>,
Andreas Enge <andreas@enge.fr>, Eric Bavier <bavier@posteo.net>,
Sharlatan Hellseher <sharlatanus@gmail.com>
Subject: [bug#69924] [PATCH 28/49] gnu: python-astroquery: Update to 0.4.7.
Date: Wed, 20 Mar 2024 22:27:58 +0000 [thread overview]
Message-ID: <723a2b917889f249f18648e4aaaa7d07ef7fbf81.1710967274.git.sharlatanus@gmail.com> (raw)
In-Reply-To: <cover.1710967273.git.sharlatanus@gmail.com>
* gnu/packages/astronomy.scm (python-astroquery): Update to 0.4.7.
[arguments] <#:test-flags>: Disable one failing test.
<#:phases>: Remove 'prepare-test-environment phase. Add custom 'check
phase.
Change-Id: I159a9d765de7f8de00c4bf226febfc90d2ba6c76
---
gnu/packages/astronomy.scm | 35 +++++++++++++++++++----------------
1 file changed, 19 insertions(+), 16 deletions(-)
diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index b3ce51c8df..efd70f5500 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -1739,34 +1739,37 @@ (define-public python-astropy-iers-data
(define-public python-astroquery
(package
(name "python-astroquery")
- (version "0.4.6")
+ (version "0.4.7")
(source
(origin
(method url-fetch)
(uri (pypi-uri "astroquery" version))
(sha256
- (base32 "1vhkzsqlgn3ji5by2rdf2gwklhbyzvpzb1iglalhqjkkrdaaaz1h"))))
+ (base32 "1jbyfhqk74wsdjxzqi0hcrgc7ha4q8cyjx96nv6w9bjg1b5vlzq4"))))
(build-system pyproject-build-system)
(arguments
(list
#:test-flags
#~(list "--pyargs" "astroquery"
- "-m" "not remote_data")
+ "-m" "not remote_data"
+ ;; Some tests failed with parallel run, see
+ ;; <https://github.com/astropy/astroquery/issues/2968>.
+ ;; "-n" "auto"
+ "-k" (string-append
+ ;; Failed: DID NOT RAISE <class
+ ;; 'astropy.utils.exceptions.AstropyDeprecationWarning'>
+ "not test_raises_deprecation_warning"))
#:phases
#~(modify-phases %standard-phases
- (add-before 'check 'prepare-test-environment
- (lambda _
- (setenv "HOME" (getcwd)) ; some tests need a writable home
- ;; To solve pytest/conftest issue. Pytest tries to load all
- ;; files with word 'test' in them.
- ;;
- ;; ImportError while loading conftest ...
- ;; _pytest.pathlib.ImportPathMismatchError: ...
- ;;
- (call-with-output-file "pytest.ini"
- (lambda (port)
- (format port "[pytest]
-python_files = test_*.py"))))))))
+ (replace 'check
+ (lambda* (#:key tests? test-flags #:allow-other-keys)
+ (when tests?
+ ;; Some tests require write access to $HOME.
+ (setenv "HOME" "/tmp")
+ ;; Step out of the source directory to avoid interference;
+ ;; we want to run the installed code with extensions etc.
+ (with-directory-excursion "/tmp"
+ (apply invoke "pytest" "-v" test-flags))))))))
(propagated-inputs
(list python-astropy
python-beautifulsoup4
--
2.41.0
next prev parent reply other threads:[~2024-03-20 23:53 UTC|newest]
Thread overview: 51+ messages / expand[flat|nested] mbox.gz Atom feed top
2024-03-20 22:24 [bug#69924] [PATCH 00/49] gnu: Astronomy 2024/02 updates Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 01/49] gnu: calcmysky: Update to 0.3.2 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 02/49] gnu: splash: Update to 3.10.3 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 03/49] gnu: python-blosc: Move to python-compression Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 04/49] gnu: python-blosc: Simplify package Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 05/49] gnu: python-pytest-doctestplus: Update to 1.2.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 06/49] gnu: python-pytest-arraydiff: Update to 0.6.1 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 07/49] gnu: python-pytest-arraydiff: Enable tests Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 08/49] gnu: python-pytest-filter-subpackage: Update to 0.2.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 09/49] gnu: python-zarr: Update to 2.17.1 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 10/49] gnu: python-partd: Enable tests Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 11/49] gnu: python-zarr: Speed up tests Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 12/49] gnu: python-distributed: " Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 13/49] gnu: python-dask: " Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 14/49] gnu: python-stdatamodels: " Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 15/49] gnu: python-glymur: " Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 16/49] gnu: python-ginga: Update to 5.0.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 17/49] gnu: python-astropy-iers-data: Update to 0.2024.3.18.0.29.47 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 18/49] gnu: python-cdflib: Update to 1.2.6 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 19/49] gnu: python-cdflib: Enable all tests Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 20/49] gnu: python-asdf-unit-schemas: Update to 0.2.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 21/49] gnu: python-asdf-standard: Update to 1.1.1 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 22/49] gnu: python-asdf-transform-schemas: Update to 0.5.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 23/49] gnu: python-asdf: Update to 3.1.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 24/49] gnu: python-asdf-coordinates-schemas: Update to 0.3.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 25/49] gnu: python-asdf-wcs-schemas: Update to 0.4.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 26/49] gnu: python-asdf-astropy: Update to 0.6.0 Sharlatan Hellseher
2024-03-20 22:27 ` [bug#69924] [PATCH 27/49] gnu: python-pyvo: Update to 1.5.1 Sharlatan Hellseher
2024-03-20 22:27 ` Sharlatan Hellseher [this message]
2024-03-20 22:27 ` [bug#69924] [PATCH 29/49] gnu: python-gwcs: Update to 0.21.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 30/49] gnu: python-drizzle: Update to 1.15.1 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 31/49] gnu: python-suntime: Update to 1.3.2 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 32/49] gnu: python-suntime: Refresh package style Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 33/49] gnu: python-radiospectra: Update to 0.5.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 34/49] gnu: python-glymur: Update to 0.12.9 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 35/49] gnu: python-specutils: Update to 1.13.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 36/49] gnu: python-stcal: Update to 1.6.1 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 37/49] gnu: python-stcal: Enable sanity check Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 38/49] gnu: python-stdatamodels: Update to 1.10.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 39/49] gnu: python-crds: Update to 11.17.19 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 40/49] gnu: python-pynbody: Update to 1.6.0 Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 41/49] gnu: Add python-asdf-zarr Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 42/49] gnu: Add python-asdf-compression Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 43/49] gnu: Add python-astroplan Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 44/49] gnu: Add python-nose-exclude Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 45/49] gnu: Add python-ewah-bool-utils Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 46/49] gnu: Add python-cmyt Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 47/49] gnu: Add python-pytest-examples Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 48/49] gnu: Add python-pydantic-settings Sharlatan Hellseher
2024-03-20 22:28 ` [bug#69924] [PATCH 49/49] gnu: python-hvpy: Update to 1.1.0 Sharlatan Hellseher
2024-03-29 15:11 ` bug#69924: [PATCH 00/49] gnu: Astronomy 2024/02 updates Sharlatan Hellseher
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