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| | ;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2015 Ricardo Wurmus <rekado@elephly.net>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix. If not, see <http://www.gnu.org/licenses/>.
(define-module (guix import cran)
#:use-module (ice-9 match)
#:use-module (ice-9 regex)
#:use-module (srfi srfi-1)
#:use-module (sxml simple)
#:use-module (sxml match)
#:use-module (sxml xpath)
#:use-module (guix http-client)
#:use-module (guix hash)
#:use-module (guix store)
#:use-module (guix base32)
#:use-module ((guix download) #:select (download-to-store))
#:use-module (guix import utils)
#:export (cran->guix-package))
;;; Commentary:
;;;
;;; Generate a package declaration template for the latest version of an R
;;; package on CRAN, using the HTML description downloaded from
;;; cran.r-project.org.
;;;
;;; Code:
(define string->license
(match-lambda
("AGPL-3" 'agpl3)
("Artistic-2.0" 'artistic2.0)
("Apache License 2.0" 'asl2.0)
("BSD_2_clause" 'bsd-2)
("BSD_3_clause" 'bsd-3)
("GPL-2" 'gpl2)
("GPL-3" 'GPL3)
("LGPL-2" 'lgpl2.0)
("LGPL-2.1" 'lgpl2.1)
("LGPL-3" 'lgpl3)
("MIT" 'x11)
((x) (string->license x))
((lst ...) `(list ,@(map string->license lst)))
(_ #f)))
(define (format-inputs names)
"Generate a sorted list of package inputs from a list of package NAMES."
(sort
(map (lambda (name)
(list name (list 'unquote (string->symbol name))))
names)
(lambda args
(match args
(((a _ ...) (b _ ...))
(string-ci<? a b))))))
(define (maybe-inputs package-inputs)
"Given a list of PACKAGE-INPUTS, tries to generate the 'inputs' field of a
package definition."
(match package-inputs
(()
'())
((package-inputs ...)
`((inputs (,'quasiquote ,(format-inputs package-inputs)))))))
(define (cran-fetch name)
"Return an sxml representation of the CRAN page for the R package NAME,
or #f on failure. NAME is case-sensitive."
;; This API always returns the latest release of the module.
(let ((cran-url (string-append "http://cran.r-project.org/web/packages/" name)))
(false-if-exception
(xml->sxml (http-fetch cran-url)
#:trim-whitespace? #t
#:namespaces '((xhtml . "http://www.w3.org/1999/xhtml"))
#:default-entity-handler
(lambda (port name)
(case name
((nbsp) " ")
((ge) ">=")
((gt) ">")
((lt) "<")
(else
(format (current-warning-port)
"~a:~a:~a: undefined entitity: ~a\n"
cran-url (port-line port) (port-column port)
name)
(symbol->string name))))))))
(define (cran-sxml->sexp sxml)
"Return the `package' s-expression for a CRAN package from the SXML
representation of the package page."
(define (nodes->text nodeset)
(string-join ((sxpath '(// *text*)) nodeset) " "))
;; Extract the datum node next to a LABEL in the sxml table TREE.
(define (table-datum tree label)
(let ((label-node ((sxpath `(xhtml:tr (equal? (xhtml:td ,label)))) tree)))
(if (null? label-node)
'()
((node-pos 1)
((take-after (node-eq? (car label-node)))
((node-join
(node-parent tree)
(select-kids (node-typeof? '*)))
label-node))))))
(define (guix-name name)
(if (string-prefix? "r-" name)
(string-downcase name)
(string-append "r-" (string-downcase name))))
(sxml-match-let*
(((xhtml:html
,head
(xhtml:body
(xhtml:h2 ,name-and-synopsis)
(xhtml:p ,description)
,summary
(xhtml:h4 "Downloads:") ,downloads
. ,rest))
(cadr sxml)))
(let* ((name (match:prefix (string-match ": " name-and-synopsis)))
(synopsis (match:suffix (string-match ": " name-and-synopsis)))
(version (nodes->text (table-datum summary "Version:")))
(license ((compose string->license nodes->text)
(table-datum summary "License:")))
(home-page (nodes->text ((sxpath '((xhtml:a 1)))
(table-datum summary "URL:"))))
(source-url (string-append "mirror://cran/"
;; Remove double dots, because we want an
;; absolute path.
(regexp-substitute/global
#f "\\.\\./"
(string-join
((sxpath '((xhtml:a 1) @ href *text*))
(table-datum downloads " Package source: ")))
'pre 'post)))
(tarball (with-store store (download-to-store store source-url)))
(sysdepends (map match:substring
(list-matches
"[^ ]+"
;; Strip off comma and parenthetical
;; expressions.
(regexp-substitute/global
#f "(,|\\([^\\)]+\\))"
(nodes->text (table-datum summary "SystemRequirements:"))
'pre 'post))))
(imports (map guix-name
((sxpath '(// xhtml:a *text*))
(table-datum summary "Imports:")))))
`(package
(name ,(guix-name name))
(version ,version)
(source (origin
(method url-fetch)
(uri (string-append ,@(factorize-uri source-url version)))
(sha256
(base32
,(bytevector->nix-base32-string (file-sha256 tarball))))))
(build-system r-build-system)
,@(maybe-inputs (append sysdepends imports))
(home-page ,home-page)
(synopsis ,synopsis)
;; Use double spacing
(description ,(regexp-substitute/global #f "\\. \\b" description
'pre ". " 'post))
(license ,license)))))
(define (cran->guix-package package-name)
"Fetch the metadata for PACKAGE-NAME from cran.r-project.org, and return the
`package' s-expression corresponding to that package, or #f on failure."
(let ((module-meta (cran-fetch package-name)))
(and=> module-meta cran-sxml->sexp)))
|