;;; GNU Guix --- Functional package management for GNU
;;; Copyright © 2019 Ricardo Wurmus <rekado@elephly.net>
;;; Copyright © 2019 Tobias Geerinckx-Rice <me@tobias.gr>
;;; Copyright © 2019, 2020 Efraim Flashner <efraim@flashner.co.il>
;;; Copyright © 2019 Maxim Cournoyer <maxim.cournoyer@gmail.com>
;;; Copyright © 2019 Hartmut Goebel <h.goebel@crazy-compilers.com>
;;; Copyright © 2020 Julien Lepiller <julien@lepiller.eu>
;;; Copyright © 2020 Marius Bakke <mbakke@fastmail.com>
;;; Copyright © 2020 Edouard Klein <edk@beaver-labs.com>
;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
;;; Copyright © 2020 Tanguy Le Carrour <tanguy@bioneland.org>
;;;
;;; This file is part of GNU Guix.
;;;
;;; GNU Guix is free software; you can redistribute it and/or modify it
;;; under the terms of the GNU General Public License as published by
;;; the Free Software Foundation; either version 3 of the License, or (at
;;; your option) any later version.
;;;
;;; GNU Guix is distributed in the hope that it will be useful, but
;;; WITHOUT ANY WARRANTY; without even the implied warranty of
;;; MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
;;; GNU General Public License for more details.
;;;
;;; You should have received a copy of the GNU General Public License
;;; along with GNU Guix.  If not, see <http://www.gnu.org/licenses/>.

(define-module (gnu packages python-check)
  #:use-module (gnu packages)
  #:use-module (gnu packages check)
  #:use-module (gnu packages python-web)
  #:use-module (gnu packages python-xyz)
  #:use-module (gnu packages web)
  #:use-module (gnu packages xml)
  #:use-module (guix utils)
  #:use-module ((guix licenses) #:prefix license:)
  #:use-module (guix packages)
  #:use-module (guix git-download)
  #:use-module (guix download)
  #:use-module (guix build-system python))

(define-public python-coveralls
  (package
    (name "python-coveralls")
    (version "1.11.1")
    (home-page "https://github.com/coveralls-clients/coveralls-python")
    (source
     (origin
       ;; The PyPI release lacks tests, so we pull from git instead.
       (method git-fetch)
       (uri (git-reference (url home-page) (commit version)))
       (file-name (git-file-name name version))
       (sha256
        (base32
         "1zr1lqdjcfwj6wcx2449mzzjq8bbhwnqcm5vdif5s8hlz35bjxkp"))))
    (build-system python-build-system)
    (arguments
     '(#:phases (modify-phases %standard-phases
                  (add-before 'check 'disable-git-test
                    (lambda _
                      ;; Remove test that requires 'git' and the full checkout.
                      (delete-file "tests/git_test.py")
                      #t))
                  (replace 'check
                    (lambda* (#:key tests? #:allow-other-keys)
                      (if tests?
                          (invoke "pytest" "-vv")
                          (format #t "test suite not run~%"))
                      #t)))))
    (propagated-inputs
     `(("python-coverage" ,python-coverage)
       ("python-docopt" ,python-docopt)
       ("python-pyyaml" ,python-pyyaml)
       ("python-requests" ,python-requests)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)))
    (synopsis "Show coverage stats online via coveralls.io")
    (description
     "Coveralls.io is a service for publishing code coverage statistics online.
This package provides seamless integration with coverage.py (and thus pytest,
nosetests, etc...) in Python projects.")
    (license license:expat)))

(define-public python-vcrpy
  (package
    (name "python-vcrpy")
    (version "2.0.1")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "vcrpy" version))
        (sha256
         (base32
          "0kws7l3hci1dvjv01nxw3805q9v2mwldw58bgl8s90wqism69gjp"))))
    (build-system python-build-system)
    (arguments `(#:tests? #f)) ; tests require more packages for python-pytest-httpbin
    (propagated-inputs
     `(("python-pyyaml" ,python-pyyaml)
       ("python-six" ,python-six)
       ("python-wrapt" ,python-wrapt)
       ("python-yarl" ,python-yarl)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)
       ("python-pytest-httpbin" ,python-pytest-httpbin)))
    (home-page "https://github.com/kevin1024/vcrpy")
    (synopsis "Automatically mock your HTTP interactions")
    (description
     "VCR.py simplifies and speeds up tests that make HTTP requests.  The first
time you run code that is inside a VCR.py context manager or decorated function,
VCR.py records all HTTP interactions that take place through the libraries it
supports and serializes and writes them to a flat file (in yaml format by
default).  This flat file is called a cassette.  When the relevant piece of code
is executed again, VCR.py will read the serialized requests and responses from
the aforementioned cassette file, and intercept any HTTP requests that it
recognizes from the original test run and return the responses that corresponded
to those requests.  This means that the requests will not actually result in
HTTP traffic, which confers several benefits including:
@enumerate
@item The ability to work offline
@item Completely deterministic tests
@item Increased test execution speed
@end enumerate
If the server you are testing against ever changes its API, all you need to do
is delete your existing cassette files, and run your tests again.  VCR.py will
detect the absence of a cassette file and once again record all HTTP
interactions, which will update them to correspond to the new API.")
    (license license:expat)))

(define-public python-pytest-arraydiff
  (package
    (name "python-pytest-arraydiff")
    (version "0.3")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-arraydiff" version))
       (sha256
        (base32 "05bcvhh2ycxa35znl8b3l9vkcmx7vwm5c3fpakbpw46c7vsn4bfy"))))
    (build-system python-build-system)
    (arguments
     ;; Tests require python-astropy, which itself requires this package.
     ;; Disable tests to avoid the circular dependency problem.
     '(#:tests? #f))
    (propagated-inputs
     `(("python-numpy" ,python-numpy)
       ("python-six" ,python-six)))
    (home-page "https://github.com/astropy/pytest-arraydiff")
    (synopsis "Pytest plugin to help with comparing array output from tests")
    (description
     "This is a py.test plugin to facilitate the generation and comparison of
data arrays produced during tests, in particular in cases where the arrays
are too large to conveniently hard-code them in the tests.")
    (license license:bsd-3)))

(define-public python-pytest-doctestplus
  (package
    (name "python-pytest-doctestplus")
    (version "0.7.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-doctestplus" version))
       (sha256
        (base32 "1ai9kvd7xbq2jg2h8gmkb8lqzyrxvdh4zg3vxndg149iwd1hyi7d"))))
    (build-system python-build-system)
    (arguments
     '(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda* (#:key inputs outputs #:allow-other-keys)
             ;; Make the installed plugin discoverable by Pytest.
             (add-installed-pythonpath inputs outputs)
             (invoke "pytest" "-vv"))))))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (home-page "https://github.com/astropy/pytest-doctestplus")
    (synopsis "Pytest plugin with advanced doctest features")
    (description
     "This package contains a plugin for the Pytest framework that provides
advanced doctest support and enables the testing of reStructuredText files.")
    (license license:bsd-3)))

(define-public python-pytest-filter-subpackage
  (package
    (name "python-pytest-filter-subpackage")
    (version "0.1.1")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-filter-subpackage" version))
       (sha256
        (base32 "1s4s2kd31yc65rfvl4xhy8xx806xhy59kc7668h6b6wq88xgrn5p"))))
    (build-system python-build-system)
    (arguments
     '(;; One test is failing. There's an issue reported upstream. See
       ;; https://github.com/astropy/pytest-filter-subpackage/issues/3.
       ;; Disable it for now.
       #:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda* (#:key inputs outputs #:allow-other-keys)
             ;; Make the installed plugin discoverable by Pytest.
             (add-installed-pythonpath inputs outputs)
             (invoke "pytest" "-vv" "-k" "not test_with_rst"))))))
    (native-inputs
     `(("python-pytest" ,python-pytest)
       ("python-pytest-cov" ,python-pytest-cov)
       ("python-pytest-doctestplus"
        ,python-pytest-doctestplus)))
    (home-page "https://github.com/astropy/pytest-filter-subpackage")
    (synopsis "Pytest plugin for filtering based on sub-packages")
    (description
     "This package contains a simple plugin for the pytest framework that
provides a shortcut to testing all code and documentation for a given
sub-package.")
    (license license:bsd-3)))

(define-public python-pytest-openfiles
  (package
    (name "python-pytest-openfiles")
    (version "0.5.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-openfiles" version))
       (sha256
        (base32 "0n0a7fdc9m86360y96l23fvdmd6rw04bl6h5xqgl9qxfv08jk70p"))))
    (build-system python-build-system)
    (arguments
     '(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda* (#:key inputs outputs #:allow-other-keys)
             ;; Make the installed plugin discoverable by Pytest.
             (add-installed-pythonpath inputs outputs)
             (invoke "pytest" "-vv"))))))
    (native-inputs
     `(("python-setuptools-scm" ,python-setuptools-scm)
       ("python-pytest" ,python-pytest)))
    (propagated-inputs
     `(("python-psutil" ,python-psutil)))
    (home-page "https://github.com/astropy/pytest-openfiles")
    (synopsis "Pytest plugin for detecting inadvertent open file handles")
    (description
     "This package provides a plugin for the pytest framework that allows
developers to detect whether any file handles or other file-like objects
were inadvertently left open at the end of a unit test.")
    (license license:bsd-3)))

(define-public python-pytest-remotedata
  (package
    (name "python-pytest-remotedata")
    (version "0.3.2")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-remotedata" version))
       (sha256
        (base32 "1h6g6shib6z07azf12rnsa053470ggbd7hy3bnbw8nf3nza5h372"))))
    (build-system python-build-system)
    (arguments
     '(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda* (#:key inputs outputs #:allow-other-keys)
             ;; Make the installed plugin discoverable by Pytest.
             (add-installed-pythonpath inputs outputs)
             (invoke "pytest" "-vv" "-k"
                     (string-append
                      ;; These tests require internet access. Disable them.
                      "not test_default_behavior"
                      " and not test_strict_with_decorator")))))))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (propagated-inputs
     `(("python-six" ,python-six)))
    (home-page "https://github.com/astropy/pytest-remotedata")
    (synopsis "Pytest plugin for controlling remote data access")
    (description
     "This package provides a plugin for the Pytest framework that allows
developers to control unit tests that require access to data from the
internet.")
    (license license:bsd-3)))

(define-public python-pytest-mpl
  (package
    (name "python-pytest-mpl")
    (version "0.11")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-mpl" version))
       (sha256
        (base32 "1km202c1s5kcn52fx0266p06qb34va3warcby594dh6vixxa9i96"))))
    (build-system python-build-system)
    (arguments
     '(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda _
             (invoke "pytest" "-vv"))))))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (propagated-inputs
     `(("python-matplotlib" ,python-matplotlib)
       ("python-pillow" ,python-pillow)))
    (home-page "https://github.com/matplotlib/pytest-mpl")
    (synopsis "Pytest plugin to help with testing figures output from Matplotlib")
    (description
     "This is a plugin to facilitate image comparison for Matplotlib figures
in Pytest.")
    (license license:bsd-3)))

(define-public python-covdefaults
  (package
    (name "python-covdefaults")
    (version "1.1.0")
    (source
     (origin
       ;; The PyPI tarball does not include tests.
       (method git-fetch)
       (uri (git-reference
             (url "https://github.com/asottile/covdefaults")
             (commit (string-append "v" version))))
       (file-name (git-file-name name version))
       (sha256
        (base32 "11a24c0wzv01n55fy4kdpnyqna4m9k0mp58kmhiaks34xw4k37hq"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda _
             (invoke "pytest" "-vv"))))))
    (native-inputs
     `(("python-coverage" ,python-coverage)
       ("python-pytest" ,python-pytest)))
    (home-page "https://github.com/asottile/covdefaults")
    (synopsis "Coverage plugin to provide opinionated default settings")
    (description
     "Covdefaults is a coverage plugin to provide opinionated default
 settings.")
    (license license:expat)))

(define-public python-pytest-vcr
  ;; This commit fixes integration with pytest-5
  (let ((commit "4d6c7b3e379a6a7cba0b8f9d20b704dc976e9f05")
        (revision "1"))
    (package
      (name "python-pytest-vcr")
      (version (git-version "1.0.2" revision commit))
      (source
        (origin
          (method git-fetch)
          (uri (git-reference
                 (url "https://github.com/ktosiek/pytest-vcr")
                 (commit commit)))
          (file-name (git-file-name name version))
          (sha256
           (base32
            "1yk988zi0la6zpcm3fff0mxf942di2jiymrfqas19nyngj5ygaqs"))))
      (build-system python-build-system)
      (arguments
       `(#:phases
         (modify-phases %standard-phases
           (replace 'check
             (lambda* (#:key inputs outputs #:allow-other-keys)
               (add-installed-pythonpath inputs outputs)
               (invoke "pytest" "tests/"))))))
      (propagated-inputs
       `(("python-pytest" ,python-pytest)
         ("python-vcrpy" ,python-vcrpy)))
      (home-page "https://github.com/ktosiek/pytest-vcr")
      (synopsis "Plugin for managing VCR.py cassettes")
      (description
       "Plugin for managing VCR.py cassettes.")
      (license license:expat))))

(define-public python-pytest-checkdocs
  (package
    (name "python-pytest-checkdocs")
    (version "1.2.2")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-checkdocs" version))
       (sha256
        (base32 "0j6j1gvj6x451y3qsx4xbaq9p1w9gg3mwk7n0w80cy8vdyjkngb0"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-docutils" ,python-docutils)
       ("python-importlib-metadata" ,python-importlib-metadata)
       ("python-more-itertools" ,python-more-itertools)))
    (native-inputs
     `(("python-setuptools-scm" ,python-setuptools-scm)))
    (home-page "https://github.com/jaraco/pytest-checkdocs")
    (synopsis "Check the README when running tests")
    (description
     "This package provides a pytest plugin that checks the long description
of the project to ensure it renders properly.")
    (license license:expat)))

(define-public python-pytest-flake8
  (package
    (name "python-pytest-flake8")
    (version "1.0.6")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-flake8" version))
       (sha256
        (base32
         "09vhn7r77s1yiqnlwfvh5585f904zpyd6620a90dpccfr1cbp0hv"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-flake8" ,python-flake8)))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (home-page "https://github.com/tholo/pytest-flake8")
    (synopsis "Pytest plugin to check FLAKE8 requirements")
    (description
     "This package provides a pytest plugin for efficiently checking PEP8
compliance.")
    (license license:bsd-3)))

(define-public python-pytest-isort
  (package
    (name "python-pytest-isort")
    (version "0.3.1")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-isort" version))
       (sha256
        (base32 "06myn5hhxs5yp8dqr1yjsgcnnxnsrvsqannm00bvaw0qml6ydzjb"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda _
             (setenv "PYTHONPATH"
                     (string-append (getcwd) ":"
                                    (getenv "PYTHONPATH")))
             (invoke "pytest"))))))
    (propagated-inputs
     `(("python-isort" ,python-isort)
       ("python-pytest" ,python-pytest)))
    (home-page "https://github.com/moccu/pytest-isort/")
    (synopsis "Pytest plugin to check import ordering using isort")
    (description
     "This package provides a pytest plugin to check import ordering using
isort.")
    (license license:bsd-3)))

(define-public python-pytest-shutil
  (package
    (name "python-pytest-shutil")
    (version "1.7.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-shutil" version))
       (sha256
        (base32
         "0q8j0ayzmnvlraml6i977ybdq4xi096djhf30n2m1rvnvrhm45nq"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (add-after 'unpack 'patch-tests
           (lambda _
             (mkdir "/tmp/bin")
             (substitute* "tests/integration/test_cmdline_integration.py"
               (("dirname = '/bin'")
                "dirname = '/tmp/bin'")
               (("bindir = os.path.realpath\\('/bin'\\)")
                "bindir = os.path.realpath('/tmp/bin')"))
             #t)))))
    (propagated-inputs
     `(("python-contextlib2" ,python-contextlib2)
       ("python-execnet" ,python-execnet)
       ("python-pathpy" ,python-pathpy)
       ("python-termcolor" ,python-termcolor)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)
       ("python-setuptools-git" ,python-setuptools-git)))
    (home-page "https://github.com/manahl/pytest-plugins")
    (synopsis "Assorted shell and environment tools for py.test")
    (description
     "This package provides assorted shell and environment tools for the
py.test testing framework.")
    (license license:expat)))

(define-public python-pytest-fixture-config
  (package
    (name "python-pytest-fixture-config")
    (version "1.7.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-fixture-config" version))
       (sha256
        (base32
         "13i1qpz22w3x4dmw8vih5jdnbqfqvl7jiqs0dg764s0zf8bp98a1"))))
    (build-system python-build-system)
    (native-inputs
     `(("python-pytest" ,python-pytest)
       ("python-setuptools-git" ,python-setuptools-git)))
    (home-page "https://github.com/manahl/pytest-plugins")
    (synopsis "Fixture configuration utils for py.test")
    (description
     "This package provides fixture configuration utilities for the py.test
testing framework.")
    (license license:expat)))

(define-public python-pytest-virtualenv
  (package
    (name "python-pytest-virtualenv")
    (version "1.7.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-virtualenv" version))
       (sha256
        (base32
         "03w2zz3crblj1p6i8nq17946hbn3zqp9z7cfnifw47hi4a4fww12"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         ;; Reference the virtualenv executable directly, to avoid the need
         ;; for PYTHONPATH, which gets cleared when instantiating a new
         ;; virtualenv with pytest-virtualenv.
         (add-after 'unpack 'patch-virtualenv-executable
           (lambda* (#:key inputs #:allow-other-keys)
             (let* ((virtualenv (assoc-ref inputs "python-virtualenv"))
                    (virtualenv-bin (string-append virtualenv
                                                   "/bin/virtualenv")))
               (substitute* "pytest_virtualenv.py"
                 (("^DEFAULT_VIRTUALENV_FIXTURE_EXECUTABLE.*$")
                  (format #f "DEFAULT_VIRTUALENV_FIXTURE_EXECUTABLE = '~a'"
                          virtualenv-bin)))
               #t))))))
    (propagated-inputs
     `(("python-pytest-shutil" ,python-pytest-shutil)
       ("python-pytest-fixture-config" ,python-pytest-fixture-config)))
    (inputs
     `(("python-virtualenv" ,python-virtualenv)))
    (native-inputs
     `(("python-mock" ,python-mock)
       ("python-pytest" ,python-pytest)
       ("python-setuptools-git" ,python-setuptools-git)))
    (home-page "https://github.com/manahl/pytest-plugins")
    (synopsis "Virtualenv fixture for py.test")
    (description "This package provides a virtualenv fixture for the py.test
framework.")
    (license license:expat)))

(define-public python-pytest-pycodestyle
  (package
    (name "python-pytest-pycodestyle")
    (version "2.0.0")               ;later versions require python-pytest~=5.4
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-pycodestyle" version))
       (sha256
        (base32
         "02i5gl7pm9cwxk15sn29inz3n8flpj1r3p1l110h43f2na5w8h7z"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-pycodestyle" ,python-pycodestyle)))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (home-page "https://github.com/henry0312/pytest-pycodestyle")
    (synopsis "Pytest plugin to run pycodestyle")
    (description "This package provides a plugin to run @code{pycodestyle}
for the @code{pytest} framework.")
    (license license:expat)))

(define-public python-pytest-benchmark
  (package
    (name "python-pytest-benchmark")
    (version "3.2.3")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-benchmark" version))
       (sha256
        (base32
         "0a4mpb4j73dsyk47hd1prrjpfk4r458s102cn80rf253jg818hxd"))))
    (build-system python-build-system)
    (propagated-inputs
     `(("python-py-cpuinfo" ,python-py-cpuinfo)))
    (native-inputs
     `(("python-pathlib2" ,python-pathlib2)
       ("python-pytest" ,python-pytest)))
    (home-page "https://github.com/ionelmc/pytest-benchmark")
    (synopsis "Pytest fixture for benchmarking code")
    (description
     "This package provides a pytest fixture that will group the tests into
rounds that are calibrated to the chosen timer.")
    (license license:bsd-2)))

(define-public python-pytest-services
  (package
    (name "python-pytest-services")
    (version "1.3.1")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "pytest-services" version))
        (sha256
         (base32
          "0b2zfv04w6m3gp2v44ifdhx22vcji069qnn95ry3zcyxib7cjnq3"))))
    (build-system python-build-system)
    (arguments '(#:tests? #f)) ; Tests not included in release tarball.
    (propagated-inputs
     `(("python-psutil" ,python-psutil)
       ("python-requests" ,python-requests)))
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (home-page "https://github.com/pytest-dev/pytest-services")
    (synopsis "Services plugin for pytest testing framework")
    (description
     "This plugin provides a set of fixtures and utility functions to start
service processes for your tests with pytest.")
    (license license:expat)))

(define-public python-pytest-aiohttp
  (package
    (name "python-pytest-aiohttp")
    (version "0.3.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-aiohttp" version))
       (sha256
        (base32
         "0kx4mbs9bflycd8x9af0idcjhdgnzri3nw1qb0vpfyb3751qaaf9"))))
    (build-system python-build-system)
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (propagated-inputs
     `(("python-aiohttp" ,python-aiohttp)))
    (home-page "https://github.com/aio-libs/pytest-aiohttp/")
    (synopsis "Pytest plugin for aiohttp support")
    (description "This package provides a pytest plugin for aiohttp support.")
    (license license:asl2.0)))

(define-public python-nbval
  (package
    (name "python-nbval")
    (version "0.9.5")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "nbval" version))
       (sha256
        (base32 "1xh2p7g5s5g06caaraf3dsz69bpj7dgw2h3ss67kci789aspnwp8"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (add-before 'check 'fix-test
           (lambda _
             ;; This test fails because of a mismatch in the output of LaTeX
             ;; equation environments.  Seems OK to skip.
             (delete-file "tests/ipynb-test-samples/test-latex-pass-correctouput.ipynb")
             #t))
         (replace 'check
           (lambda* (#:key inputs outputs #:allow-other-keys)
             (add-installed-pythonpath inputs outputs)
             (invoke "pytest" "-vv" "-k"
                     (string-append
                     ;; This only works with Pytest < 5.
                      "not nbdime_reporter"
                     ;; https://github.com/computationalmodelling/nbval/pull/148.
                      " and not test_timeouts")))))))
    (native-inputs
     `(("python-pytest" ,python-pytest)
       ("python-pytest-cov" ,python-pytest-cov)
       ("python-sympy" ,python-sympy)))
    (propagated-inputs
     `(("python-ipykernel" ,python-ipykernel)
       ("python-jupyter-client" ,python-jupyter-client)
       ("python-nbformat" ,python-nbformat)
       ("python-six" ,python-six)))
    (home-page "https://github.com/computationalmodelling/nbval")
    (synopsis "Pytest plugin to validate Jupyter notebooks")
    (description
     "This plugin adds functionality to Pytest to recognise and collect Jupyter
notebooks.  The intended purpose of the tests is to determine whether execution
of the stored inputs match the stored outputs of the @file{.ipynb} file.  Whilst
also ensuring that the notebooks are running without errors.")
    (license license:bsd-3)))

(define-public python-pytest-flask
  (package
    (name "python-pytest-flask")
    (version "1.0.0")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-flask" version))
       (sha256
        (base32
         "1hln7mwgdzfi5ma0kqfsi768l7p24jhkw8l0imhifwy08nh7hmjd"))))
    (build-system python-build-system)
    (native-inputs
     `(("python-flask" ,python-flask)
       ("python-pytest" ,python-pytest)
       ("python-setuptools-scm" ,python-setuptools-scm)
       ("python-werkzeug" ,python-werkzeug)))
    (home-page "https://github.com/pytest-dev/pytest-flask")
    (synopsis "Pytest fixtures to test Flask applications")
    (description
     "This pytest plugin provides fixtures to simplify Flask app testing.")
    (license license:expat)))

(define-public python-pytest-env
  (package
    (name "python-pytest-env")
    (version "0.6.2")
    (source
     (origin
       (method url-fetch)
       (uri (pypi-uri "pytest-env" version))
       (sha256
        (base32 "1hl0ln0cicdid4qjk7mv90lw9xkb0v71dlj7q7rn89vzxxm9b53y"))))
    (build-system python-build-system)
    (native-inputs
     `(("python-pytest" ,python-pytest)))
    (home-page "https://github.com/MobileDynasty/pytest-env")
    (synopsis "Pytest plugin that allows you to add environment variables")
    (description
     "This is a @code{py.test} plugin that enables you to set environment
variables in the @file{pytest.ini} file.")
    (license license:expat)))

(define-public python-codacy-coverage
  (package
    (name "python-codacy-coverage")
    (version "1.3.11")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "codacy-coverage" version))
        (sha256
         (base32
          "1g0c0w56xdkmqb8slacyw5qhzrkp814ng3ddh2lkiij58y9m2imr"))))
    (build-system python-build-system)
    (arguments
     `(#:tests? #f)); no tests
    (propagated-inputs
     `(("python-check-manifest" ,python-check-manifest)))
    (home-page "https://github.com/codacy/python-codacy-coverage")
    (synopsis "Codacy coverage reporter for Python")
    (description "This package analyses Python test suites and reports how much
of the code is covered by them.  This tool is part of the Codacy suite for
analysing code quality.")
    (license license:expat)))

(define-public python-httmock
  (package
    (name "python-httmock")
    (version "1.3.0")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "httmock" version))
        (sha256
         (base32
          "1zj1fcm0n6f0wr9mr0hmlqz9430fnr5cdwd5jkcvq9j44bnsrfz0"))))
    (build-system python-build-system)
    (arguments
     `(#:tests? #f)); no tests
    (propagated-inputs
     `(("python-requests" ,python-requests)))
    (home-page "https://github.com/patrys/httmock")
    (synopsis "Mocking library for requests.")
    (description "This package provides a library for replying fake data to
Python software under test, when they make an HTTP query.")
    (license license:asl2.0)))

(define-public python-atpublic
  (package
    (name "python-atpublic")
    (version "1.0")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "atpublic" version))
        (sha256
         (base32
          "0i3sbxkdlbb4560rrlmwwd5y4ps7k73lp4d8wnmd7ag9k426gjkx"))))
    (build-system python-build-system)
    (arguments
     '(#:phases
       (modify-phases %standard-phases
         (add-before 'build 'enable-c-implementation
           (lambda _
             (setenv "ATPUBLIC_BUILD_EXTENSION" "yes")
             #t))
         (replace 'check
           (lambda _
             (invoke "python" "-m" "nose2" "-v"))))))
    (native-inputs
     `(("python-nose2" ,python-nose2)))
    (home-page "https://public.readthedocs.io/")
    (synopsis "@code{@@public} decorator for populating @code{__all__}")
    (description
     "This Python module adds a @code{@@public} decorator and function which
populates a module's @code{__all__} and optionally the module globals.  With
it, the declaration of a name's public export semantics are not separated from
the implementation of that name.")
    (license (list license:asl2.0
                   license:lgpl3))))    ; only for setup_helpers.py

(define-public python-mypy-extensions
  (package
    (name "python-mypy-extensions")
    (version "0.4.3")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "mypy_extensions" version))
        (sha256
         (base32
          "1a04qsk8hd1lqns8w1j7cr0vmvbhg450di5k1i16kqxkbf7q30id"))))
    (build-system python-build-system)
    (arguments `(#:tests? #f)); no tests
    (home-page "https://github.com/python/mypy_extensions")
    (synopsis "Experimental extensions for MyPy")
    (description "The @code{python-mypy-extensions} module defines
experimental extensions to the standard @code{typing} module that are
supported by the MyPy typechecker.")
    (license license:expat)))

(define-public python-mypy
  (package
    (name "python-mypy")
    (version "0.782")
    (source
      (origin
        (method url-fetch)
        (uri (pypi-uri "mypy" version))
        (sha256
         (base32
          "030kn709515452n6gy2i1d9fg6fyrkmdz228lfpmbslybsld9xzg"))))
    (build-system python-build-system)
    (arguments
     `(#:phases
       (modify-phases %standard-phases
         (replace 'check
           (lambda _
             (invoke "./runtests.py")
             #t)))))
    (native-inputs
     `(("python-attrs" ,python-attrs)
       ("python-flake8" ,python-flake8)
       ("python-flake8-bugbear" ,python-flake8-bugbear)
       ("python-flake8-pyi" ,python-flake8-pyi)
       ("python-importlib-metadata" ,python-importlib-metadata)
       ("python-lxml" ,python-lxml)
       ("python-psutil" ,python-psutil)
       ("python-py" ,python-py)
       ("python-pytest" ,python-pytest)
       ("python-pytest-cov" ,python-pytest-cov)
       ("python-pytest-forked" ,python-pytest-forked)
       ("python-pytest-xdist" ,python-pytest-xdist)
       ("python-virtualenv" ,python-virtualenv)))
    (propagated-inputs
     `(("python-mypy-extensions" ,python-mypy-extensions)
       ("python-typing-extensions" ,python-typing-extensions)
       ("python-typed-ast" ,python-typed-ast)))
    (home-page "http://www.mypy-lang.org/")
    (synopsis "Static type checker for Python")
    (description "Mypy is an optional static type checker for Python that aims
to combine the benefits of dynamic (or 'duck') typing and static typing.  Mypy combines
the expressive power and convenience of Python with a powerful type system and
compile-time type checking.  Mypy type checks standard Python programs; run them using
any Python VM with basically no runtime overhead.")
    ;; Most of the code is under MIT license; Some files are under Python Software
    ;; Foundation License version 2: stdlib-samples/*, mypyc/lib-rt/pythonsupport.h and
    ;; mypyc/lib-rt/getargs.c
    (license (list license:expat license:psfl))))