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From: Sharlatan Hellseher <sharlatanus@gmail.com>
To: 64201@debbugs.gnu.org
Cc: Sharlatan Hellseher <sharlatanus@gmail.com>,
	Andreas Enge <andreas@enge.fr>,
	Efraim Flashner <efraim@flashner.co.il>,
	Eric Bavier <bavier@posteo.net>
Subject: [bug#64201] [PATCH 01/20] gnu: sextractor: Update to 2.28.0, fix build.
Date: Wed, 21 Jun 2023 07:33:40 +0100	[thread overview]
Message-ID: <37f2b71e03baa80f6af3d6b8fdb9fa0424418ca5.1687302523.git.sharlatanus@gmail.com> (raw)
In-Reply-To: <cover.1687302523.git.sharlatanus@gmail.com>

* gnu/packages/astronomy.scm (sextractor): Update to 2.28.0, fix build.
[arguments]: Use G-expressions, add configure flags for CFitsio
detection.
[inputs]: Remove labels. Add cfitsio.
---
 gnu/packages/astronomy.scm | 34 +++++++++++++++++++---------------
 1 file changed, 19 insertions(+), 15 deletions(-)

diff --git a/gnu/packages/astronomy.scm b/gnu/packages/astronomy.scm
index cdb6750f09..787ca01491 100644
--- a/gnu/packages/astronomy.scm
+++ b/gnu/packages/astronomy.scm
@@ -747,7 +747,7 @@ (define-public phd2
 (define-public sextractor
   (package
     (name "sextractor")
-    (version "2.25.0")
+    (version "2.28.0")
     (source
      (origin
        (method git-fetch)
@@ -756,29 +756,33 @@ (define-public sextractor
              (commit version)))
        (file-name (git-file-name name version))
        (sha256
-        (base32 "0q69n3nyal57h3ik2xirwzrxzljrwy9ivwraxzv9566vi3n4z5mw"))))
+        (base32 "15v7brjiraj2rdyxiidcgb58b3dqzdd363j31cjrfqhd1wc8ii5j"))))
     (build-system gnu-build-system)
     ;; NOTE: (Sharlatan-20210124T103117+0000): Building with `atlas' is failing
     ;; due to missing shared library which required on configure phase. Switch
     ;; build to use `openblas' instead. It requires FFTW with single precision
     ;; `fftwf'.
     (arguments
-     `(#:configure-flags
-       (list
-        "--enable-openblas"
-        (string-append
-         "--with-openblas-libdir=" (assoc-ref %build-inputs "openblas") "/lib")
-        (string-append
-         "--with-openblas-incdir=" (assoc-ref %build-inputs "openblas") "/include")
-        (string-append
-         "--with-fftw-libdir=" (assoc-ref %build-inputs "fftw") "/lib")
-        (string-append
-         "--with-fftw-incdir=" (assoc-ref %build-inputs "fftw") "/include"))))
+     (list
+      #:configure-flags
+      #~(list
+         "--enable-openblas"
+         (string-append "--with-cfitsio-incdir="
+                        #$(this-package-input "cfitsio") "/include")
+         (string-append "--with-cfitsio-libdir="
+                        #$(this-package-input "cfitsio") "/lib")
+         (string-append "--with-fftw-incdir="
+                        #$(this-package-input "fftwf") "/include")
+         (string-append "--with-fftw-libdir="
+                        #$(this-package-input "fftwf") "/lib")
+         (string-append "--with-openblas-incdir="
+                        #$(this-package-input "openblas") "/include")
+         (string-append "--with-openblas-libdir="
+                        #$(this-package-input "openblas") "/lib"))))
     (native-inputs
      (list autoconf automake libtool))
     (inputs
-     `(("openblas" ,openblas)
-       ("fftw" ,fftwf)))
+     (list cfitsio fftwf openblas))
     (home-page "https://www.astromatic.net/software/sextractor")
     (synopsis "Extract catalogs of sources from astronomical images")
     (description
-- 
2.40.1





  reply	other threads:[~2023-06-21  7:14 UTC|newest]

Thread overview: 50+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2023-06-21  6:28 [bug#64201] [PATCH 00/19] gnu: monthly astronomy packages update Sharlatan Hellseher
2023-06-21  6:33 ` Sharlatan Hellseher [this message]
2023-06-21  6:33 ` [bug#64201] [PATCH 02/20] gnu: python-photutils: Update to 1.8.0 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 03/20] gnu: calceph: Update to 3.5.2 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 04/20] gnu: calcmysky: Update to 0.3.1 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 05/20] gnu: libxisf: Update to 0.2.8 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 06/20] gnu: splash: Update to 3.8.2 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 07/20] gnu: python-astropy: Update to 5.3 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 08/20] gnu: python-ccdproc: Update to 2.4.1 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 09/20] gnu: python-cdflib: Update to 1.0.5 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 10/20] gnu: python-drms: Update to 0.6.4 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 11/20] gnu: python-fitsio: Update to 1.1.9 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 12/20] gnu: python-fitsio: Enable tests Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 13/20] gnu: python-pyerfa: Update to 2.0.0.3 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 14/20] gnu: python-pyerfa: Fix tests Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 15/20] gnu: python-reproject: Update to 0.11.0 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 16/20] gnu: python-stcal: Update to 1.3.8 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 17/20] gnu: python-stdatamodels: Update to 1.6.0 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 18/20] gnu: python-sunpy: Update to 5.0.0 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 19/20] gnu: python-synphot: Update to 1.2.1 Sharlatan Hellseher
2023-06-21  6:33 ` [bug#64201] [PATCH 20/20] gnu: python-astroalign: Fix build Sharlatan Hellseher
2023-07-10 21:11 ` [bug#64201] Sharlatan Hellseher
2023-07-21 17:51   ` [bug#64201] Sharlatan Hellseher
2023-07-21 18:40     ` [bug#64201] Maxim Cournoyer
2023-07-26 23:15 ` [bug#64201] [PATCH v2 00/22]: gnu: Astronmy June updates Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 01/22] gnu: sextractor: Update to 2.28.0, fix build Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 02/22] gnu: sextractor: Use G-expressions Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 03/22] gnu: python-photutils: Update package style Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 04/22] gnu: calceph: Update to 3.5.2 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 05/22] gnu: calcmysky: Update to 0.3.1 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 06/22] gnu: libxisf: Update to 0.2.8 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 07/22] gnu: splash: Update to 3.8.2 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 08/22] gnu: python-astropy: Update to 5.3.1 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 09/22] gnu: python-ccdproc: Update to 2.4.1 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 10/22] gnu: python-cdflib: Update to 1.0.5 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 11/22] gnu: python-drms: Update to 0.6.4 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 12/22] gnu: python-fitsio: Update to 1.1.10 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 13/22] gnu: python-fitsio: Enable tests Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 14/22] gnu: python-pyerfa: Update to 2.0.0.3 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 15/22] gnu: python-pyerfa: Fix tests Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 16/22] gnu: python-pyerfa: Use G-expressions Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 17/22] gnu: python-reproject: Update to 0.11.0 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 18/22] gnu: python-stcal: Update to 1.4.2 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 19/22] gnu: python-stdatamodels: Update to 1.7.1 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 20/22] gnu: python-sunpy: Update to 5.0.0 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 21/22] gnu: python-synphot: Update to 1.2.1 Sharlatan Hellseher
2023-07-26 23:15   ` [bug#64201] [PATCH v2 22/22] gnu: python-astroalign: Fix build Sharlatan Hellseher
2023-08-07 18:20   ` [bug#64201] [PATCH v2 00/22]: gnu: Astronmy June updates Andreas Enge
2023-08-07 20:11     ` Sharlatan Hellseher
2023-08-08  8:09       ` bug#64201: " Andreas Enge

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