From: Jean-Baptiste Volatier via Guix-patches via <guix-patches@gnu.org>
To: 51319@debbugs.gnu.org
Cc: Jean-Baptiste Volatier <jbv@pm.me>
Subject: [bug#51319] [PATCH 2/2] gnu: Add julia-sundials-jull
Date: Thu, 21 Oct 2021 13:10:06 +0000 [thread overview]
Message-ID: <20211021130952.14696-3-jbv@pm.me> (raw)
In-Reply-To: <20211021130952.14696-1-jbv@pm.me>
* gnu/packages/julia-jll.scm (julia-sundials-jll): New variable.
* gnu/packages/maths.scm (sundials-julia): New variable.
---
gnu/packages/julia-jll.scm | 38 ++++++++++++++++++++++++++++++++++++++
gnu/packages/maths.scm | 24 ++++++++++++++++++++++++
2 files changed, 62 insertions(+)
diff --git a/gnu/packages/julia-jll.scm b/gnu/packages/julia-jll.scm
index d3677d0a33..e1c33903dd 100644
--- a/gnu/packages/julia-jll.scm
+++ b/gnu/packages/julia-jll.scm
@@ -2709,3 +2709,41 @@ (define-public julia-zstd-jll
(synopsis "Zstd library wrappers")
(description "This package provides a wrapper for the zstd library.")
(license license:expat)))
+
+(define-public julia-sundials-jll
+ (package
+ (name "julia-sundials-jll")
+ (version "5.2.1+0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/JuliaBinaryWrappers/Sundials_jll.jl")
+ (commit (string-append "Sundials-v" version))))
+ (file-name (git-file-name name version))
+ (sha256
+ (base32 "0cijb9frq8gj8bjpqf2lr5d0jxlj262y6h6xi4z3536dingrvffc"))))
+ (build-system julia-build-system)
+ (arguments
+ '(#:tests? #f ; no runtests
+ #:phases
+ (modify-phases %standard-phases
+ (add-after 'link-depot 'override-binary-path
+ (lambda* (#:key inputs #:allow-other-keys)
+ (map
+ (lambda (wrapper)
+ (substitute* wrapper
+ (("global artifact_dir.*")
+ (string-append
+ "global artifact_dir = \""
+ (assoc-ref inputs "sundials") "\"\n"))))
+ ;; There's a Julia file for each platform, override them all
+ (find-files "src/wrappers/" "\\.jl$")))))))
+ (inputs
+ `(("sundials" ,sundials-julia)))
+ (propagated-inputs
+ `(("julia-jllwrappers" ,julia-jllwrappers)))
+ (home-page "https://github.com/JuliaBinaryWrappers/Sundials_jll.jl")
+ (synopsis "SUndials library wrappers")
+ (description "This package provides a wrapper for the sundials library.")
+ (license license:expat)))
diff --git a/gnu/packages/maths.scm b/gnu/packages/maths.scm
index 038ca5518c..54f44a3b55 100644
--- a/gnu/packages/maths.scm
+++ b/gnu/packages/maths.scm
@@ -5943,6 +5943,30 @@ (define-public sundials-openmpi
,%openmpi-setup)))))
(synopsis "SUNDIALS with OpenMPI support")))
+(define-public sundials-julia
+ (package
+ (inherit sundials)
+ (name "sundials-julia")
+ (version "5.2.0")
+ (source
+ (origin
+ (method git-fetch)
+ (uri (git-reference
+ (url "https://github.com/LLNL/sundials.git")
+ (commit (string-append "v" version))))
+ (sha256
+ (base32
+ "08q9svjdl6fmqrwyd9p12m98n0wd2lws38yh223wyp6590zi3i49"))))
+ (inputs
+ `(("lapack" ,lapack)
+ ,@(package-inputs sundials)))
+ (arguments
+ (substitute-keyword-arguments (package-arguments sundials)
+ ((#:configure-flags flags '())
+ `(cons* "-DLAPACK_ENABLE:BOOL=ON"
+ ,flags))))
+ (synopsis "SUNDIALS with lapack support as required by julia-sundials-jll")))
+
(define-public combinatorial-blas
(package
(name "combinatorial-blas")
--
2.33.1
prev parent reply other threads:[~2021-10-21 13:11 UTC|newest]
Thread overview: 10+ messages / expand[flat|nested] mbox.gz Atom feed top
2021-10-21 13:06 [bug#51319] [PATCH 0/2] Better interoperability between guix and Julia built-in package manager Jean-Baptiste Volatier via Guix-patches via
2021-10-21 13:09 ` Jean-Baptiste Volatier via Guix-patches via
2021-10-21 13:09 ` [bug#51319] [PATCH 1/2] build-system/julia: Enable Julia Pkg to find installed packages Jean-Baptiste Volatier via Guix-patches via
2021-11-08 7:30 ` Efraim Flashner
2021-11-12 14:23 ` [bug#51319] [PATCH v2 0/2] Better interoperability between guix and Julia built-in package manager Jean-Baptiste Volatier via Guix-patches via
2021-11-12 14:23 ` [bug#51319] [PATCH v2 1/2] build-system/julia: Enable Julia Pkg to find installed packages Jean-Baptiste Volatier via Guix-patches via
2021-11-12 14:24 ` [bug#51319] [PATCH v2 2/2] gnu: Add julia-sundials-jull Jean-Baptiste Volatier via Guix-patches via
2022-03-09 23:33 ` [bug#51319] [PATCH 0/2] Better interoperability between guix and Julia built-in package manager Ludovic Courtès
2022-03-09 23:59 ` bug#51319: " zimoun
2021-10-21 13:10 ` Jean-Baptiste Volatier via Guix-patches via [this message]
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