From: Kei Kebreau <kkebreau@posteo.net>
To: 28384@debbugs.gnu.org
Cc: Kei Kebreau <kkebreau@posteo.net>
Subject: [bug#28384] [PATCH] gnu: Fix build failures caused by commit.
Date: Thu, 7 Sep 2017 12:43:40 -0400 [thread overview]
Message-ID: <20170907164340.32328-1-kkebreau@posteo.net> (raw)
* gnu/packages/bioinformatics.scm (seek)[arguments]: Modify unpack phase.
* gnu/packages/ci.scm (cuirass)[arguments]: Add patch-/bin/sh phase.
---
gnu/packages/bioinformatics.scm | 2 ++
gnu/packages/ci.scm | 6 +++++-
2 files changed, 7 insertions(+), 1 deletion(-)
diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index bf8eb2e69..699c463bf 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -4488,6 +4488,8 @@ distribution, coverage uniformity, strand specificity, etc.")
(modify-phases %standard-phases
(add-after 'unpack 'bootstrap
(lambda _
+ (substitute* "gen_tools_am"
+ (("/usr/bin/env perl") (which "perl")))
(zero? (system* "bash" "gen_auto"))))
(add-after 'build 'build-additional-tools
(lambda* (#:key make-flags #:allow-other-keys)
diff --git a/gnu/packages/ci.scm b/gnu/packages/ci.scm
index c449754be..3b182b826 100644
--- a/gnu/packages/ci.scm
+++ b/gnu/packages/ci.scm
@@ -216,7 +216,11 @@ their dependencies.")
(substitute* "Makefile.am"
(("tests/repo.scm \\\\") "\\"))
#t))
- (add-after 'disable-repo-tests 'bootstrap
+ (add-after 'disable-repo-tests 'patch-/bin/sh
+ (lambda _
+ (substitute* "build-aux/git-version-gen"
+ (("#!/bin/sh") (string-append "#!" (which "sh"))))))
+ (add-after 'patch-/bin/sh 'bootstrap
(lambda _ (zero? (system* "sh" "bootstrap"))))
(add-after 'install 'wrap-program
(lambda* (#:key inputs outputs #:allow-other-keys)
--
2.14.1
next reply other threads:[~2017-09-07 16:45 UTC|newest]
Thread overview: 9+ messages / expand[flat|nested] mbox.gz Atom feed top
2017-09-07 16:43 Kei Kebreau [this message]
2017-09-08 15:43 ` [bug#28384] [PATCH] gnu: Fix build failures caused by commit Ludovic Courtès
2017-09-08 16:41 ` Kei Kebreau
2017-09-08 20:33 ` Ludovic Courtès
2017-09-08 22:10 ` Kei Kebreau
2017-09-10 12:53 ` Ludovic Courtès
2017-09-10 13:32 ` Kei Kebreau
2017-09-10 20:39 ` Ludovic Courtès
2017-09-10 22:26 ` bug#28384: " Kei Kebreau
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