[bug#54620] [PATCH 2/3] Add r-stager

["Hong.Li@mdc-berlin.de" <Hong.Li@mdc-berlin.de>]

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From 5c0016a8e9b905e6eeae1d682b9db16379030e94 Mon Sep 17 00:00:00 2001
From: "Li, Hong" <hong.li@mdc-berlin.de>
Date: Mon, 28 Mar 2022 11:41:51 +0200
Subject: [PATCH 2/3] Add r-stager

---
 gnu/packages/bioconductor.scm | 23 +++++++++++++++++++++++
 1 file changed, 23 insertions(+)

diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 55d397e5cf..c22199528e 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -4739,6 +4739,29 @@ events and allows for the incorporation of prior knowledge through supervised
 graph construction.")
    (license license:artistic2.0)))
 
+(define-public r-stager
+  (package
+    (name "r-stager")
+    (version "1.16.0")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (bioconductor-uri "stageR" version))
+        (sha256
+          (base32 "0vpx0v04hgkhzi0bm7ipnb9xr37n5wvnnr45lljgni8pwabfkf6y"))))
+    (properties `((upstream-name . "stageR")))
+    (build-system r-build-system)
+    (propagated-inputs (list r-summarizedexperiment))
+    (native-inputs (list r-knitr))
+    (home-page "https://bioconductor.org/packages/stageR")
+    (synopsis
+      "stageR: stage-wise analysis of high throughput gene expression data")
+    (description
+      "The stageR package allows automated stage-wise analysis of high-throughput gene
+expression data.  The method is published in Genome Biology at
+https://genomebiology.biomedcentral.com/articles/10.1186/s13059-017-1277-0")
+    (license license:#f)))
+
 (define-public r-stringdb
   (package
     (name "r-stringdb")
-- 
2.26.1