From: Greg Hogan <code@greghogan.com>
To: 45699@debbugs.gnu.org
Subject: [bug#45699] [PATCH] gnu: python-scipy: Update to 1.6.0.
Date: Wed, 6 Jan 2021 13:47:58 -0500 [thread overview]
Message-ID: <CA+3U0ZnxheAHO4j_16f_yXKa-Rci3njOYZuAEzv_hXL8hN3YMQ@mail.gmail.com> (raw)
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From d03cf7fcf8351827dcf5d1a342c26bc5ffee7046 Mon Sep 17 00:00:00 2001
From: Greg Hogan <code@greghogan.com>
Date: Tue, 5 Jan 2021 17:09:15 +0000
Subject: [PATCH] gnu: python-scipy: Update to 1.6.0.
* gnu/packages/python-xyz.scm (python-scipy): Update to 1.6.0.
[inputs]: Add pybind11.
[arguments]<#:phases>['change-home-dir]: New phase.
---
gnu/packages/python-science.scm | 13 ++++++++++---
1 file changed, 10 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/python-science.scm
b/gnu/packages/python-science.scm
index 99903ef247..a1e2b57669 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -10,6 +10,7 @@
;;; Copyright © 2019 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2021 Greg Hogan <code@greghogan.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -50,13 +51,13 @@
(define-public python-scipy
(package
(name "python-scipy")
- (version "1.3.2")
+ (version "1.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "scipy" version))
(sha256
- (base32 "192d8dsybvhv19igkrsafbdafx198nz7pibkjgrqjhlr66s3jfd0"))))
+ (base32 "0rh5b1rwdcvvagld8vpxnpaibszy1skpx39a0fwzd5gx5pwcjvfb"))))
(build-system python-build-system)
(propagated-inputs
`(("python-numpy" ,python-numpy)
@@ -64,7 +65,8 @@
("python-pyparsing" ,python-pyparsing)))
(inputs
`(("lapack" ,lapack)
- ("openblas" ,openblas)))
+ ("openblas" ,openblas)
+ ("pybind11" ,pybind11)))
(native-inputs
`(("python-cython" ,python-cython)
("python-pytest" ,python-pytest)
@@ -77,6 +79,11 @@
(arguments
`(#:phases
(modify-phases %standard-phases
+ (add-before 'build 'change-home-dir
+ (lambda _
+ ;; Change from /homeless-shelter to /tmp for write permission.
+ (setenv "HOME" "/tmp")
+ #t))
(add-after 'unpack 'disable-broken-tests
(lambda _
(substitute*
"scipy/sparse/linalg/dsolve/tests/test_linsolve.py"
--
2.30.0
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From d03cf7fcf8351827dcf5d1a342c26bc5ffee7046 Mon Sep 17 00:00:00 2001
From: Greg Hogan <code@greghogan.com>
Date: Tue, 5 Jan 2021 17:09:15 +0000
Subject: [PATCH] gnu: python-scipy: Update to 1.6.0.
* gnu/packages/python-xyz.scm (python-scipy): Update to 1.6.0.
[inputs]: Add pybind11.
[arguments]<#:phases>['change-home-dir]: New phase.
---
gnu/packages/python-science.scm | 13 ++++++++++---
1 file changed, 10 insertions(+), 3 deletions(-)
diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm
index 99903ef247..a1e2b57669 100644
--- a/gnu/packages/python-science.scm
+++ b/gnu/packages/python-science.scm
@@ -10,6 +10,7 @@
;;; Copyright © 2019 Giacomo Leidi <goodoldpaul@autistici.org>
;;; Copyright © 2020 Pierre Langlois <pierre.langlois@gmx.com>
;;; Copyright © 2020 Vinicius Monego <monego@posteo.net>
+;;; Copyright © 2021 Greg Hogan <code@greghogan.com>
;;;
;;; This file is part of GNU Guix.
;;;
@@ -50,13 +51,13 @@
(define-public python-scipy
(package
(name "python-scipy")
- (version "1.3.2")
+ (version "1.6.0")
(source
(origin
(method url-fetch)
(uri (pypi-uri "scipy" version))
(sha256
- (base32 "192d8dsybvhv19igkrsafbdafx198nz7pibkjgrqjhlr66s3jfd0"))))
+ (base32 "0rh5b1rwdcvvagld8vpxnpaibszy1skpx39a0fwzd5gx5pwcjvfb"))))
(build-system python-build-system)
(propagated-inputs
`(("python-numpy" ,python-numpy)
@@ -64,7 +65,8 @@
("python-pyparsing" ,python-pyparsing)))
(inputs
`(("lapack" ,lapack)
- ("openblas" ,openblas)))
+ ("openblas" ,openblas)
+ ("pybind11" ,pybind11)))
(native-inputs
`(("python-cython" ,python-cython)
("python-pytest" ,python-pytest)
@@ -77,6 +79,11 @@
(arguments
`(#:phases
(modify-phases %standard-phases
+ (add-before 'build 'change-home-dir
+ (lambda _
+ ;; Change from /homeless-shelter to /tmp for write permission.
+ (setenv "HOME" "/tmp")
+ #t))
(add-after 'unpack 'disable-broken-tests
(lambda _
(substitute* "scipy/sparse/linalg/dsolve/tests/test_linsolve.py"
--
2.30.0
next reply other threads:[~2021-01-06 18:49 UTC|newest]
Thread overview: 2+ messages / expand[flat|nested] mbox.gz Atom feed top
2021-01-06 18:47 Greg Hogan [this message]
2021-02-09 15:50 ` bug#45699: [PATCH] gnu: python-scipy: Update to 1.6.0 Jelle Licht
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