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[inputs]: Add pybind11. [arguments]<#:phases>['change-home-dir]: New phase. --- gnu/packages/python-science.scm | 13 ++++++++++--- 1 file changed, 10 insertions(+), 3 deletions(-) diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-science.scm index 99903ef247..a1e2b57669 100644 --- a/gnu/packages/python-science.scm +++ b/gnu/packages/python-science.scm @@ -10,6 +10,7 @@ ;;; Copyright =C2=A9 2019 Giacomo Leidi ;;; Copyright =C2=A9 2020 Pierre Langlois ;;; Copyright =C2=A9 2020 Vinicius Monego +;;; Copyright =C2=A9 2021 Greg Hogan ;;; ;;; This file is part of GNU Guix. ;;; @@ -50,13 +51,13 @@ (define-public python-scipy (package (name "python-scipy") - (version "1.3.2") + (version "1.6.0") (source (origin (method url-fetch) (uri (pypi-uri "scipy" version)) (sha256 - (base32 "192d8dsybvhv19igkrsafbdafx198nz7pibkjgrqjhlr66s3jfd0")))) + (base32 "0rh5b1rwdcvvagld8vpxnpaibszy1skpx39a0fwzd5gx5pwcjvfb")))) (build-system python-build-system) (propagated-inputs `(("python-numpy" ,python-numpy) @@ -64,7 +65,8 @@ ("python-pyparsing" ,python-pyparsing))) (inputs `(("lapack" ,lapack) - ("openblas" ,openblas))) + ("openblas" ,openblas) + ("pybind11" ,pybind11))) (native-inputs `(("python-cython" ,python-cython) ("python-pytest" ,python-pytest) @@ -77,6 +79,11 @@ (arguments `(#:phases (modify-phases %standard-phases + (add-before 'build 'change-home-dir + (lambda _ + ;; Change from /homeless-shelter to /tmp for write permission= . + (setenv "HOME" "/tmp") + #t)) (add-after 'unpack 'disable-broken-tests (lambda _ (substitute* "scipy/sparse/linalg/dsolve/tests/test_linsolve.py" --=20 2.30.0 --000000000000bce97505b83fc3b5 Content-Type: text/html; charset="UTF-8" Content-Transfer-Encoding: quoted-printable
From d03cf7fcf8351827dcf5d1a342c26bc= 5ffee7046 Mon Sep 17 00:00:00 2001
From: Greg Hogan <code@greghogan.com>
Date: T= ue, 5 Jan 2021 17:09:15 +0000
Subject: [PATCH] gnu: python-scipy:= Update to 1.6.0.

* gnu/packages/python-xyz.scm (p= ython-scipy): Update to 1.6.0.
[inputs]: Add pybind11.
= [arguments]<#:phases>['change-home-dir]: New phase.
---=
=C2=A0gnu/packages/python-science.scm | 13 ++++++++++---
=C2=A01 file changed, 10 insertions(+), 3 deletions(-)

diff --git a/gnu/packages/python-science.scm b/gnu/packages/python-= science.scm
index 99903ef247..a1e2b57669 100644
--- a/g= nu/packages/python-science.scm
+++ b/gnu/packages/python-science.= scm
@@ -10,6 +10,7 @@
=C2=A0;;; Copyright =C2=A9 2019 G= iacomo Leidi <goodoldpaul@a= utistici.org>
=C2=A0;;; Copyright =C2=A9 2020 Pierre Langl= ois <pierre.langlois@gmx.com<= /a>>
+;;; Co= pyright =C2=A9 2021 Greg Hogan <co= de@greghogan.com>
=C2=A0;;;
=C2=A0;;; This file = is part of GNU Guix.
=C2=A0;;;
@@ -50,13 +51,13 @@
=C2=A0(define-public python-scipy
=C2=A0 =C2=A0(package
=C2=A0 =C2=A0 =C2=A0(name "python-scipy")
- =C2= =A0 =C2=A0(version "1.3.2")
+ =C2=A0 =C2=A0(version &qu= ot;1.6.0")
=C2=A0 =C2=A0 =C2=A0(source
=C2=A0 =C2= =A0 =C2=A0 (origin
=C2=A0 =C2=A0 =C2=A0 =C2=A0 (method url-fetch)=
=C2=A0 =C2=A0 =C2=A0 =C2=A0 (uri (pypi-uri "scipy" ver= sion))
=C2=A0 =C2=A0 =C2=A0 =C2=A0 (sha256
- =C2=A0 =C2= =A0 =C2=A0 =C2=A0(base32 "192d8dsybvhv19igkrsafbdafx198nz7pibkjgrqjhlr= 66s3jfd0"))))
+ =C2=A0 =C2=A0 =C2=A0 =C2=A0(base32 "0rh= 5b1rwdcvvagld8vpxnpaibszy1skpx39a0fwzd5gx5pwcjvfb"))))
=C2= =A0 =C2=A0 =C2=A0(build-system python-build-system)
=C2=A0 =C2=A0= =C2=A0(propagated-inputs
=C2=A0 =C2=A0 =C2=A0 `(("python-nu= mpy" ,python-numpy)
@@ -64,7 +65,8 @@
=C2=A0 =C2= =A0 =C2=A0 =C2=A0 ("python-pyparsing" ,python-pyparsing)))
<= div>=C2=A0 =C2=A0 =C2=A0(inputs
=C2=A0 =C2=A0 =C2=A0 `(("lap= ack" ,lapack)
- =C2=A0 =C2=A0 =C2=A0 ("openblas" ,= openblas)))
+ =C2=A0 =C2=A0 =C2=A0 ("openblas" ,openbla= s)
+ =C2=A0 =C2=A0 =C2=A0 ("pybind11" ,pybind11)))
=C2=A0 =C2=A0 =C2=A0(native-inputs
=C2=A0 =C2=A0 =C2=A0 `((= "python-cython" ,python-cython)
=C2=A0 =C2=A0 =C2=A0 = =C2=A0 ("python-pytest" ,python-pytest)
@@ -77,6 +79,11= @@
=C2=A0 =C2=A0 =C2=A0(arguments
=C2=A0 =C2=A0 =C2=A0= `(#:phases
=C2=A0 =C2=A0 =C2=A0 =C2=A0 (modify-phases %standard-= phases
+ =C2=A0 =C2=A0 =C2=A0 =C2=A0 (add-before 'build '= change-home-dir
+ =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 (lambda _
+ =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 ;; Change from /homeles= s-shelter to /tmp for write permission.
+ =C2=A0 =C2=A0 =C2=A0 = =C2=A0 =C2=A0 =C2=A0 (setenv "HOME" "/tmp")
+= =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 #t))
=C2=A0 =C2=A0 =C2= =A0 =C2=A0 =C2=A0 (add-after 'unpack 'disable-broken-tests
=C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 (lambda _
=C2=A0 =C2= =A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 =C2=A0 (substitute* "scipy/sparse/lina= lg/dsolve/tests/test_linsolve.py"
--=C2=A0
2.30.0<= /div>
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