From: "Mădălin Ionel Patrașcu" <madalinionel.patrascu@mdc-berlin.de>
To: <61220@debbugs.gnu.org>
Cc: rekado@elephly.net
Subject: [bug#61220] [PATCH 07/10] gnu: Add r-snapcgh.
Date: Thu, 2 Feb 2023 03:26:54 +0100 [thread overview]
Message-ID: <20230202022657.67003-7-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <20230202022657.67003-1-madalinionel.patrascu@mdc-berlin.de>
* gnu/packages/bioconductor.scm (r-snapcgh): New variable.
---
gnu/packages/bioconductor.scm | 27 +++++++++++++++++++++++++++
1 file changed, 27 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index f692114754..bce8319dcb 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -18185,6 +18185,33 @@ (define-public r-pathview
large-scale and fully automated analysis.")
(license license:gpl3+)))
+(define-public r-snapcgh
+ (package
+ (name "r-snapcgh")
+ (version "1.68.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "snapCGH" version))
+ (sha256
+ (base32
+ "1zxvl8mkby7yb5kppddag6k9w78d1fm6adx52h4cgrfckn28w64q"))))
+ (properties `((upstream-name . "snapCGH")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-acgh
+ r-cluster
+ r-dnacopy
+ r-glad
+ r-limma
+ r-tilingarray))
+ (home-page "https://bioconductor.org/packages/snapCGH")
+ (synopsis "Segmentation, normalisation and processing of the aCGH data")
+ (description
+ "This package provides methods for segmenting, normalising and processing
+aCGH data. snapCGH also includes plotting functions for visualising raw and
+segmented data for individual and multiple arrays.")
+ (license (list license:gpl2+ license:gpl3+)))) ;; expanded from GPL
+
(define-public r-snpstats
(package
(name "r-snpstats")
--
2.39.1
next prev parent reply other threads:[~2023-02-02 2:28 UTC|newest]
Thread overview: 13+ messages / expand[flat|nested] mbox.gz Atom feed top
2023-02-02 2:23 [bug#61220] [patch] gnu: Add r-glad, r-italicsdata, r-pd-mapping50k-xba240, r-italics, r-manor, r-tilingarray, r-snapcgh, r-quantsmooth, r-beadarraysnp and r-adacgh2 MadalinIonel.Patrascu
2023-02-02 2:26 ` [bug#61220] [PATCH 01/10] gnu: Add r-glad Mădălin Ionel Patrașcu
2023-02-02 2:26 ` [bug#61220] [PATCH 02/10] gnu: Add r-italicsdata Mădălin Ionel Patrașcu
2023-02-02 2:26 ` [bug#61220] [PATCH 03/10] gnu: Add r-pd-mapping50k-xba240 Mădălin Ionel Patrașcu
2023-02-02 2:26 ` [bug#61220] [PATCH 04/10] gnu: Add r-italics Mădălin Ionel Patrașcu
2023-02-02 2:26 ` [bug#61220] [PATCH 05/10] gnu: Add r-manor Mădălin Ionel Patrașcu
2023-02-02 2:26 ` [bug#61220] [PATCH 06/10] gnu: Add r-tilingarray Mădălin Ionel Patrașcu
2023-02-02 2:26 ` Mădălin Ionel Patrașcu [this message]
2023-02-02 2:26 ` [bug#61220] [PATCH 08/10] gnu: Add r-quantsmooth Mădălin Ionel Patrașcu
2023-02-02 2:26 ` [bug#61220] [PATCH 09/10] gnu: Add r-beadarraysnp Mădălin Ionel Patrașcu
2023-02-02 2:26 ` [bug#61220] [PATCH 10/10] gnu: Add r-adacgh2 Mădălin Ionel Patrașcu
2023-02-07 9:30 ` Ricardo Wurmus
2023-02-07 9:31 ` bug#61220: [PATCH 01/10] gnu: Add r-glad Ricardo Wurmus
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