* [bug#60785] [PATCH] gnu: Add r-maser.
@ 2023-01-13 15:07 Mădălin Ionel Patrașcu
2023-01-14 7:18 ` bug#60785: " Ricardo Wurmus
0 siblings, 1 reply; 2+ messages in thread
From: Mădălin Ionel Patrașcu @ 2023-01-13 15:07 UTC (permalink / raw)
To: 60785; +Cc: rekado
* gnu/packages/bioconductor.scm (r-maser): New variable.
---
gnu/packages/bioconductor.scm | 32 ++++++++++++++++++++++++++++++++
1 file changed, 32 insertions(+)
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index c2fa26cb59..ca236bcf75 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -6274,6 +6274,38 @@ (define-public r-makecdfenv
package that automatically loads that environment.")
(license license:gpl2+)))
+(define-public r-maser
+ (package
+ (name "r-maser")
+ (version "1.16.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "maser" version))
+ (sha256
+ (base32
+ "1zycx8s046g4d3w5qrn950bmi0nrnq1g7fvqji48mr6hmsyzplvv"))))
+ (properties `((upstream-name . "maser")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biocgenerics
+ r-data-table
+ r-dplyr
+ r-dt
+ r-genomeinfodb
+ r-genomicranges
+ r-ggplot2
+ r-gviz
+ r-iranges
+ r-reshape2
+ r-rtracklayer))
+ (native-inputs (list r-knitr))
+ (home-page "https://github.com/DiogoVeiga/maser")
+ (synopsis "Mapping alternative splicing events to proteins")
+ (description
+ "This package provides functionalities for downstream analysis, annotation
+and visualizaton of alternative splicing events generated by rMATS.")
+ (license license:expat)))
+
(define-public r-metaneighbor
(package
(name "r-metaneighbor")
base-commit: 789d73234d5b6bbd83bb054146d5bbd1d374d51a
--
2.38.1
^ permalink raw reply related [flat|nested] 2+ messages in thread
* bug#60785: [PATCH] gnu: Add r-maser.
2023-01-13 15:07 [bug#60785] [PATCH] gnu: Add r-maser Mădălin Ionel Patrașcu
@ 2023-01-14 7:18 ` Ricardo Wurmus
0 siblings, 0 replies; 2+ messages in thread
From: Ricardo Wurmus @ 2023-01-14 7:18 UTC (permalink / raw)
To: Mădălin Ionel Patrașcu; +Cc: 60785-done
Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:
> * gnu/packages/bioconductor.scm (r-maser): New variable.
Applied, thanks!
--
Ricardo
^ permalink raw reply [flat|nested] 2+ messages in thread
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2023-01-13 15:07 [bug#60785] [PATCH] gnu: Add r-maser Mădălin Ionel Patrașcu
2023-01-14 7:18 ` bug#60785: " Ricardo Wurmus
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