* [bug#56036] [PATCH] gnu: Add r-anf.
@ 2022-06-17 9:53 Mădălin Ionel Patrașcu
2022-07-01 8:25 ` bug#56036: " Ricardo Wurmus
0 siblings, 1 reply; 2+ messages in thread
From: Mădălin Ionel Patrașcu @ 2022-06-17 9:53 UTC (permalink / raw)
To: 56036; +Cc: rekado
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..abdca11897 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -2029,6 +2029,34 @@ (define-public r-aneufinder
sequencing data.")
(license license:artistic2.0)))
+(define-public r-anf
+ (package
+ (name "r-anf")
+ (version "1.18.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "ANF" version))
+ (sha256
+ (base32
+ "1fa2pbdapymrpz01ws0m2fbzf11d723x6rbsys29v06is57f5lpj"))))
+ (properties `((upstream-name . "ANF")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-biobase
+ r-igraph
+ r-mass
+ r-rcolorbrewer
+ r-survival))
+ (native-inputs (list r-knitr))
+ (home-page "https://bioconductor.org/packages/ANF")
+ (synopsis "Affinity network fusion for complex patient clustering")
+ (description
+ "The package @dfn{ANF}(Affinity Network Fusion) provides methods for affinity
+matrix construction and fusion as well as spectral clustering. This package is
+used for complex patient clustering by integrating multi-omic data through affinity
+network fusion.")
+ (license license:gpl3)))
+
(define-public r-biocversion
(package
(name "r-biocversion")
base-commit: ef2d908e22f9d4f4a89782766b67d425935ae4eb
--
2.36.1
^ permalink raw reply related [flat|nested] 2+ messages in thread
* bug#56036: [PATCH] gnu: Add r-anf.
2022-06-17 9:53 [bug#56036] [PATCH] gnu: Add r-anf Mădălin Ionel Patrașcu
@ 2022-07-01 8:25 ` Ricardo Wurmus
0 siblings, 0 replies; 2+ messages in thread
From: Ricardo Wurmus @ 2022-07-01 8:25 UTC (permalink / raw)
To: Mădălin Ionel Patrașcu; +Cc: 56036-done
Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:
> diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
> index 1e87b190c2..abdca11897 100644
> --- a/gnu/packages/bioconductor.scm
> +++ b/gnu/packages/bioconductor.scm
> @@ -2029,6 +2029,34 @@ (define-public r-aneufinder
> sequencing data.")
> (license license:artistic2.0)))
>
> +(define-public r-anf
Thanks. I applied it with a commit message.
--
Ricardo
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2022-06-17 9:53 [bug#56036] [PATCH] gnu: Add r-anf Mădălin Ionel Patrașcu
2022-07-01 8:25 ` bug#56036: " Ricardo Wurmus
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