* [bug#56035] [PATCH] gnu: Add r-anaquin.
@ 2022-06-17 9:42 Mădălin Ionel Patrașcu
2022-07-01 8:24 ` bug#56035: " Ricardo Wurmus
0 siblings, 1 reply; 2+ messages in thread
From: Mădălin Ionel Patrașcu @ 2022-06-17 9:42 UTC (permalink / raw)
To: 56035; +Cc: rekado
diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
index 1e87b190c2..2b7f736dfa 100644
--- a/gnu/packages/bioconductor.scm
+++ b/gnu/packages/bioconductor.scm
@@ -1987,6 +1987,36 @@ (define-public r-agimicrorna
objects are used so that other packages could be used as well.")
(license license:gpl3)))
+(define-public r-anaquin
+ (package
+ (name "r-anaquin")
+ (version "2.20.0")
+ (source (origin
+ (method url-fetch)
+ (uri (bioconductor-uri "Anaquin" version))
+ (sha256
+ (base32
+ "1jgpnls2djl1yzvnk64qc83mljmlci7wflwkza3wr0sv6r47b0dd"))))
+ (properties `((upstream-name . "Anaquin")))
+ (build-system r-build-system)
+ (propagated-inputs
+ (list r-deseq2
+ r-ggplot2
+ r-knitr
+ r-locfit
+ r-plyr
+ r-qvalue
+ r-rocr))
+ (native-inputs (list r-knitr))
+ (home-page "https://www.sequinstandards.com/")
+ (synopsis "Statistical analysis of sequins")
+ (description
+ "The project is intended to support the use of @dfn{sequins}(synthetic
+sequencing spike-in controls) owned and made available by the Garvan Institute
+of Medical Research. The goal is to provide a standard open source library for
+quantitative analysis, modelling and visualization of spike-in controls.")
+ (license license:bsd-3)))
+
(define-public r-aneufinder
(package
(name "r-aneufinder")
base-commit: ef2d908e22f9d4f4a89782766b67d425935ae4eb
--
2.36.1
^ permalink raw reply related [flat|nested] 2+ messages in thread
* bug#56035: [PATCH] gnu: Add r-anaquin.
2022-06-17 9:42 [bug#56035] [PATCH] gnu: Add r-anaquin Mădălin Ionel Patrașcu
@ 2022-07-01 8:24 ` Ricardo Wurmus
0 siblings, 0 replies; 2+ messages in thread
From: Ricardo Wurmus @ 2022-07-01 8:24 UTC (permalink / raw)
To: Mădălin Ionel Patrașcu; +Cc: 56035-done
Mădălin Ionel Patrașcu <madalinionel.patrascu@mdc-berlin.de> writes:
> diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm
> index 1e87b190c2..2b7f736dfa 100644
> --- a/gnu/packages/bioconductor.scm
> +++ b/gnu/packages/bioconductor.scm
> @@ -1987,6 +1987,36 @@ (define-public r-agimicrorna
> objects are used so that other packages could be used as well.")
> (license license:gpl3)))
>
> +(define-public r-anaquin
Thanks. I applied it with a commit message.
--
Ricardo
^ permalink raw reply [flat|nested] 2+ messages in thread
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2022-06-17 9:42 [bug#56035] [PATCH] gnu: Add r-anaquin Mădălin Ionel Patrașcu
2022-07-01 8:24 ` bug#56035: " Ricardo Wurmus
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