* [bug#55298] [PATCH 0/1] Do not propagate cwltool inputs.
@ 2022-05-07 9:34 Arun Isaac
2022-05-10 22:48 ` Ludovic Courtès
0 siblings, 1 reply; 3+ messages in thread
From: Arun Isaac @ 2022-05-07 9:34 UTC (permalink / raw)
To: 55298; +Cc: Arun Isaac
cwltool is a command-line tool, not a python library. So, its dependencies
should be regular inputs, not propagated inputs. In fact, as it stands
currently, installing cwltool fails due to a package conflict.
--8<---------------cut here---------------start------------->8---
$ guix install cwltool
The following package would be installed:
cwltool 3.1.20220119140128
guix install: error: profile contains conflicting entries for python-rdflib
guix install: error: first entry: python-rdflib@5.0.0 /gnu/store/lxy384l7avd0q4dmfs0zywllb9221y7x-python-rdflib-5.0.0
guix install: error: ... propagated from python-prov@2.0.0
guix install: error: ... propagated from cwltool@3.1.20220119140128
guix install: error: second entry: python-rdflib@6.1.1 /gnu/store/2f88f2w44zsvmx8m6ymp1fywiw1h379x-python-rdflib-6.1.1
guix install: error: ... propagated from python-rdflib-jsonld@0.6.2
guix install: error: ... propagated from python-schema-salad@8.2.20211116214159
guix install: error: ... propagated from cwltool@3.1.20220119140128
hint: You cannot have two different versions or variants of `cwltool' in the same profile.
--8<---------------cut here---------------end--------------->8---
Arun Isaac (1):
gnu: cwltool: Do not propagate inputs.
gnu/packages/bioinformatics.scm | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
--
2.36.0
^ permalink raw reply [flat|nested] 3+ messages in thread
* [bug#55298] [PATCH 0/1] Do not propagate cwltool inputs.
2022-05-07 9:34 [bug#55298] [PATCH 0/1] Do not propagate cwltool inputs Arun Isaac
@ 2022-05-10 22:48 ` Ludovic Courtès
2022-05-11 5:30 ` bug#55298: " Arun Isaac
0 siblings, 1 reply; 3+ messages in thread
From: Ludovic Courtès @ 2022-05-10 22:48 UTC (permalink / raw)
To: Arun Isaac; +Cc: 55298
Hi,
Arun Isaac <arunisaac@systemreboot.net> skribis:
> cwltool is a command-line tool, not a python library. So, its dependencies
> should be regular inputs, not propagated inputs. In fact, as it stands
> currently, installing cwltool fails due to a package conflict.
>
> $ guix install cwltool
> The following package would be installed:
> cwltool 3.1.20220119140128
>
> guix install: error: profile contains conflicting entries for python-rdflib
> guix install: error: first entry: python-rdflib@5.0.0 /gnu/store/lxy384l7avd0q4dmfs0zywllb9221y7x-python-rdflib-5.0.0
> guix install: error: ... propagated from python-prov@2.0.0
> guix install: error: ... propagated from cwltool@3.1.20220119140128
> guix install: error: second entry: python-rdflib@6.1.1 /gnu/store/2f88f2w44zsvmx8m6ymp1fywiw1h379x-python-rdflib-6.1.1
> guix install: error: ... propagated from python-rdflib-jsonld@0.6.2
> guix install: error: ... propagated from python-schema-salad@8.2.20211116214159
> guix install: error: ... propagated from cwltool@3.1.20220119140128
> hint: You cannot have two different versions or variants of `cwltool' in the same profile.
>
> Arun Isaac (1):
> gnu: cwltool: Do not propagate inputs.
>
> gnu/packages/bioinformatics.scm | 2 +-
> 1 file changed, 1 insertion(+), 1 deletion(-)
You forgot to send the actual patch, but I think removing propagated
inputs in this case is a good idea. Got for it!
Thanks,
Ludo’.
^ permalink raw reply [flat|nested] 3+ messages in thread
* bug#55298: [PATCH 0/1] Do not propagate cwltool inputs.
2022-05-10 22:48 ` Ludovic Courtès
@ 2022-05-11 5:30 ` Arun Isaac
0 siblings, 0 replies; 3+ messages in thread
From: Arun Isaac @ 2022-05-11 5:30 UTC (permalink / raw)
To: Ludovic Courtès; +Cc: 55298-done
> You forgot to send the actual patch,
Oops, sorry!
> but I think removing propagated inputs in this case is a good idea.
> Got for it!
Done, thank you!
^ permalink raw reply [flat|nested] 3+ messages in thread
end of thread, other threads:[~2022-05-11 5:57 UTC | newest]
Thread overview: 3+ messages (download: mbox.gz / follow: Atom feed)
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2022-05-07 9:34 [bug#55298] [PATCH 0/1] Do not propagate cwltool inputs Arun Isaac
2022-05-10 22:48 ` Ludovic Courtès
2022-05-11 5:30 ` bug#55298: " Arun Isaac
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