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* [bug#42119] [PATCH] gnu: Add r-fhtest and its dependencies
@ 2020-06-29  8:02 Lo Peter
  0 siblings, 0 replies; 3+ messages in thread
From: Lo Peter @ 2020-06-29  8:02 UTC (permalink / raw)
  To: 42119

Dear all,

I am submitting a patch series for r-fhtest and its dependencies.
Note that one of its dependency r-kmsurv is not included here, because
I previously submitted its patch in patch 2 of bug#42107.

Regards,
Peter




^ permalink raw reply	[flat|nested] 3+ messages in thread

* [bug#42119] [PATCH 3/5] gnu: Add r-perm.
  2020-06-29  8:03 [bug#42119] [PATCH 1/5] gnu: Add r-icens Peter Lo
@ 2020-06-29  8:03 ` Peter Lo
  2020-06-29  8:03 ` [bug#42119] [PATCH 4/5] gnu: Add r-interval Peter Lo
  1 sibling, 0 replies; 3+ messages in thread
From: Peter Lo @ 2020-06-29  8:03 UTC (permalink / raw)
  To: 42119; +Cc: Peter Lo

* gnu/packages/cran.scm (r-perm): New variable.
---
 gnu/packages/cran.scm | 21 +++++++++++++++++++++
 1 file changed, 21 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index 8be110a9bd..fe1a8e0b46 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -22354,3 +22354,24 @@ methods can also be used for univariate censored data (see data set
 set @code{menopause}).  We also provide functions to visualize the
 observed data and the MLE.")
     (license license:gpl2+)))
+
+(define-public r-perm
+  (package
+    (name "r-perm")
+    (version "1.0-0.0")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (cran-uri "perm" version))
+        (sha256
+          (base32
+            "0075awl66ynv10vypg63fcxk33qzvxddrp8mi4w08ysvimcyxijk"))))
+    (properties `((upstream-name . "perm")))
+    (build-system r-build-system)
+    (home-page
+      "https://cran.r-project.org/web/packages/perm/")
+    (synopsis
+      "Exact or Asymptotic permutation tests")
+    (description
+      "Perform Exact or Asymptotic permutation tests")
+    (license (list license:gpl2+ license:gpl3+))))
-- 
2.17.1





^ permalink raw reply	[flat|nested] 3+ messages in thread

* [bug#42119] [PATCH 4/5] gnu: Add r-interval.
  2020-06-29  8:03 [bug#42119] [PATCH 1/5] gnu: Add r-icens Peter Lo
  2020-06-29  8:03 ` [bug#42119] [PATCH 3/5] gnu: Add r-perm Peter Lo
@ 2020-06-29  8:03 ` Peter Lo
  1 sibling, 0 replies; 3+ messages in thread
From: Peter Lo @ 2020-06-29  8:03 UTC (permalink / raw)
  To: 42119; +Cc: Peter Lo

* gnu/packages/cran.scm (r-interval): New variable.
---
 gnu/packages/cran.scm | 27 +++++++++++++++++++++++++++
 1 file changed, 27 insertions(+)

diff --git a/gnu/packages/cran.scm b/gnu/packages/cran.scm
index fe1a8e0b46..d3cd199130 100644
--- a/gnu/packages/cran.scm
+++ b/gnu/packages/cran.scm
@@ -22375,3 +22375,30 @@ observed data and the MLE.")
     (description
       "Perform Exact or Asymptotic permutation tests")
     (license (list license:gpl2+ license:gpl3+))))
+
+(define-public r-interval
+  (package
+    (name "r-interval")
+    (version "1.1-0.1")
+    (source
+      (origin
+        (method url-fetch)
+        (uri (cran-uri "interval" version))
+        (sha256
+          (base32
+            "1lln9jkli28i4wivwzqrsxvv2n15560f7msjy5gssrm45vxrxms8"))))
+    (properties `((upstream-name . "interval")))
+    (build-system r-build-system)
+    (propagated-inputs
+      `(("r-icens" ,r-icens)
+        ("r-mlecens" ,r-mlecens)
+        ("r-perm" ,r-perm)
+        ("r-survival" ,r-survival)))
+    (home-page
+      "https://cran.r-project.org/web/packages/interval/")
+    (synopsis
+      "Weighted Logrank Tests and NPMLE for interval censored data")
+    (description
+      "This package provides functions to fit nonparametric survival
+curves, plot them, and perform logrank or Wilcoxon type tests.")
+    (license license:gpl2+)))
-- 
2.17.1





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