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From: pimi <madalinionel.patrascu@mdc-berlin.de>
To: 32984@debbugs.gnu.org
Cc: pimi <madalinionel.patrascu@mdc-berlin.de>
Subject: [bug#32984] [PATCH] gnu: filtlong: update path in aux script.
Date: Tue, 9 Oct 2018 18:22:39 +0200	[thread overview]
Message-ID: <20181009162239.17415-1-madalinionel.patrascu@mdc-berlin.de> (raw)
In-Reply-To: <20181008091741.31531-1-madalinionel.patrascu@mdc-berlin.de>

* gnu/packages/bioinformatics.scm (filtlong)[extra scritps]: corrected
the loading path for the filtlong in the script read_info_histograms.sh.
---
 gnu/packages/bioinformatics.scm | 2 ++
 1 file changed, 2 insertions(+)

diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm
index ed713cd14..cb9ce4df0 100644
--- a/gnu/packages/bioinformatics.scm
+++ b/gnu/packages/bioinformatics.scm
@@ -14103,6 +14103,8 @@ absolute GSEA.")
              (lambda _
                (substitute* "scripts/read_info_histograms.sh"
                  (("awk") (which "gawk")))
+               (substitute* "scripts/read_info_histograms.sh"
+                (("/../") "/../../../"))
                #t)))))
       (inputs
        `(("gawk" ,gawk)                 ;for read_info_histograms.sh
-- 
2.17.1

  parent reply	other threads:[~2018-10-09 16:24 UTC|newest]

Thread overview: 5+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2018-10-08  9:17 [bug#32984] [PATCH] gnu: Add filtlong pimi
2018-10-08 16:32 ` bug#32984: " Ludovic Courtès
2018-10-09 16:22 ` pimi [this message]
2018-10-11 20:55   ` [bug#32984] [PATCH] gnu: filtlong: update path in aux script Leo Famulari
2018-11-05 16:26     ` mpatras

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