From mboxrd@z Thu Jan 1 00:00:00 1970 From: Rainer M Krug Subject: Re: Re: Org Babel and R issue with pdf latex export Date: Mon, 28 Feb 2011 12:24:33 +0100 Message-ID: References: Mime-Version: 1.0 Content-Type: text/plain; charset=ISO-8859-1 Content-Transfer-Encoding: quoted-printable Return-path: Received: from [140.186.70.92] (port=36500 helo=eggs.gnu.org) by lists.gnu.org with esmtp (Exim 4.43) id 1Pu1DR-00066V-9d for emacs-orgmode@gnu.org; Mon, 28 Feb 2011 06:24:39 -0500 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1Pu1DO-0007sL-GV for emacs-orgmode@gnu.org; Mon, 28 Feb 2011 06:24:36 -0500 Received: from mail-qy0-f169.google.com ([209.85.216.169]:58997) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1Pu1DO-0007s8-8Z for emacs-orgmode@gnu.org; Mon, 28 Feb 2011 06:24:34 -0500 Received: by qyk2 with SMTP id 2so2209437qyk.0 for ; Mon, 28 Feb 2011 03:24:33 -0800 (PST) In-Reply-To: List-Id: "General discussions about Org-mode." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Sender: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org Errors-To: emacs-orgmode-bounces+geo-emacs-orgmode=m.gmane.org@gnu.org To: Ben Ward Cc: emacs-orgmode@gnu.org, Dan Davison On Mon, Feb 28, 2011 at 8:07 AM, Ben Ward wrote= : > On Sun, 2011-02-27 at 21:35 -0800, Dan Davison wrote: >> Ben Ward writes: >> >> > Hi, >> > >> > I recently installed emacs, org-mode fresh on a new install of Arch >> > Linux. Before I had it working on Ubuntu. >> > >> > I've installed everything as before and used the same .emacs file I ha= d, >> > but if I use org to write out some R script and export to pdf via late= x, >> > then I get an empty pdf document, with only the title and Contents >> > heading. However if I export to anything else such as html it works, a= nd >> > shows me code and results. >> >> Hi Ben, >> >> Are you sure this problem concerns babel/R? What happens when you export >> an Org document to pdf without any babel stuff? >> >> Can you provide an example Org file that you are having trouble >> exporting to pdf? The problem is probably in your local configuration, >> so if no-one can jump to the solution then start from a minimal working >> config and try to find the part of your .emacs which is causing the >> problem. >> >> Dan >> > Hi, I've tried exporting an org file that has no code in it to PDF and > it works without any trouble. > > The file I'm trying to export is: > #+TITLE: Test > #+AUTHOR: Ben J. Ward > #+LATEX_CLASS: article > #+BABEL: :session *R* :results output > \pagebreak > > Test: > > #+begin_src R :exports both > x<-c(1,2,3,4,5) > y<-c(5,10,15,20) > x > y > xy<-(x*y) > xy > #+end_src When I use your example and export it to LaTeX, I get this: ######################################### % Created 2011-02-28 Mon 12:21 \documentclass[11pt]{article} \usepackage[utf8]{inputenc} \usepackage[T1]{fontenc} \usepackage{fixltx2e} \usepackage{graphicx} \usepackage{longtable} \usepackage{float} \usepackage{wrapfig} \usepackage{soul} \usepackage{textcomp} \usepackage{marvosym} \usepackage{wasysym} \usepackage{latexsym} \usepackage{amssymb} \usepackage{hyperref} \tolerance=3D1000 \usepackage{color} \usepackage{listings} \providecommand{\alert}[1]{\textbf{#1}} \begin{document} \title{Test} \author{Ben J. Ward} \date{28 February 2011} \maketitle \setcounter{tocdepth}{3} \tableofcontents \vspace*{1cm} The file I'm trying to export is: \pagebreak Test: \lstset{language=3DR} \begin{lstlisting} x<-c(1,2,3,4,5) y<-c(5,10,15,20) x y xy<-(x*y) xy \end{lstlisting} \begin{verbatim} [1] 1 2 3 4 5 [1] 5 10 15 20 Warning message: In x * y : longer object length is not a multiple of shorter object length [1] 5 20 45 80 25 \end{verbatim} \end{document} ######################################### So it works for me - have you tried to export to LaTex? If that works, it is a LaTeX / pdf issue. Rainer > > I can include my .emacs although it's lengthy. > > I uninstalled all of my emacs stuff, and installed it from the vanilla > downloads on their respective sites, and I'm still getting the same > result. I'm considering removing all my tex stuff and installing the > vanilla texlive too. > > Thanks, > Ben W. > >> >> > I've tried even installing a version of org >> > mode from source, using the build system my distro has, so as it's mad= e >> > and installed to exactly the right place, but I still don't have any >> > luck. The texlive version I'm using is from my distro's package manage= r. >> > Using C-c C-c to evaluate on the fly works. I had an issue getting org >> > and babel to work with R on Windows 7 as well, but it was because >> > certain tex packages were missing and I recieved a message when I trie= d >> > to export, but nothing comes up here. >> > >> > Would the recent change: >> > Org-babel is now inside org, remove (require 'org-babel-init) >> > =A0 and alike from your .emacs. >> > =A0 Look at http://orgmode.org/Changes.html#ob-configuration-changes >> > =A0 for overview of the settings. >> > Be causing the entire issue? >> > >> > The .tex file I get out is thus: >> > % Created 2011-02-28 Mon 03:47 >> > \documentclass[11pt]{article} >> > \usepackage[utf8]{inputenc} >> > \usepackage[T1]{fontenc} >> > \usepackage{fixltx2e} >> > \usepackage{graphicx} >> > \usepackage{longtable} >> > \usepackage{float} >> > \usepackage{wrapfig} >> > \usepackage{soul} >> > \usepackage{textcomp} >> > \usepackage{marvosym} >> > \usepackage{wasysym} >> > \usepackage{latexsym} >> > \usepackage{amssymb} >> > \usepackage{hyperref} >> > \tolerance=3D1000 >> > \providecommand{\alert}[1]{\textbf{#1}} >> > \begin{document} >> > >> > >> > >> > \title{Test} >> > \author{Ben J. Ward} >> > \date{28 February 2011} >> > \maketitle >> > >> > \setcounter{tocdepth}{3} >> > \tableofcontents >> > \vspace*{1cm} >> > >> > \end{document} >> > >> > Thanks, >> > Ben W. >> > (Apologies if this has been sent twice, first time an error occured) >> > >> > >> > _______________________________________________ >> > Emacs-orgmode mailing list >> > Please use `Reply All' to send replies to the list. >> > Emacs-orgmode@gnu.org >> > http://lists.gnu.org/mailman/listinfo/emacs-orgmode >> > > > > _______________________________________________ > Emacs-orgmode mailing list > Please use `Reply All' to send replies to the list. > Emacs-orgmode@gnu.org > http://lists.gnu.org/mailman/listinfo/emacs-orgmode > --=20 NEW GERMAN FAX NUMBER!!! Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation Biology, UCT), Dipl. Phys. (Germany) Centre of Excellence for Invasion Biology Natural Sciences Building Office Suite 2039 Stellenbosch University Main Campus, Merriman Avenue Stellenbosch South Africa Cell:=A0 =A0 =A0 =A0 =A0=A0 +27 - (0)83 9479 042 Fax:=A0 =A0 =A0 =A0 =A0 =A0 +27 - (0)86 516 2782 Fax:=A0 =A0 =A0 =A0 =A0 =A0 +49 - (0)321 2125 2244 email:=A0 =A0 =A0 =A0 =A0 Rainer@krugs.de Skype:=A0 =A0 =A0 =A0 =A0 RMkrug Google:=A0 =A0 =A0 =A0=A0 R.M.Krug@gmail.com