* Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818
@ 2019-05-28 8:50 rey-coyrehourcq
2019-05-28 10:48 ` David Bremner
2019-05-28 12:45 ` sebastien rey-coyrehourcq
0 siblings, 2 replies; 6+ messages in thread
From: rey-coyrehourcq @ 2019-05-28 8:50 UTC (permalink / raw)
To: Notmuch Mail
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Hi,
Using Ubuntu 18, i have a segfault after update and recompilation of notmuch at
commit 73cebe6e7233f59ba26d9f7c05265b7776795818 (HEAD -> master, origin/master,
origin/HEAD)
Running : notmuch new
(process:29765): GLib-GObject-WARNING **: 10:33:54.858: cannot register existing
type 'GMimeStream'
(process:29765): GLib-GObject-CRITICAL **: 10:33:54.859: g_type_register_static:
assertion 'parent_type > 0' failed
(process:29765): GLib-GObject-CRITICAL **: 10:33:54.859:
g_object_new_with_properties: assertion 'G_TYPE_IS_OBJECT (object_type)' failed
[1] 29765 segmentation fault (core dumped) notmuch new
Using GDB :
(gdb) runStarting program: /home/reyman/Binaire/notmuch new[Thread debugging
using libthread_db enabled]Using host libthread_db library "/lib/x86_64-linux-
gnu/libthread_db.so.1".
(process:32147): GLib-GObject-WARNING **: 10:42:03.024: cannot register existing
type 'GMimeStream'
(process:32147): GLib-GObject-CRITICAL **: 10:42:03.024: g_type_register_static:
assertion 'parent_type > 0' failed
(process:32147): GLib-GObject-CRITICAL **: 10:42:03.024:
g_object_new_with_properties: assertion 'G_TYPE_IS_OBJECT (object_type)' failed
Program received signal SIGSEGV, Segmentation fault.0x00007ffff6969410 in
g_mime_stream_construct () from /usr/lib/x86_64-linux-gnu/libgmime-3.0.so.0
Sébastien Rey-Coyrehourcq
Research Engineer UMR IDEES
02.35.14.69.30
{Stronger security for your email, follow EFF tutorial : https://ssd.eff.org/}
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^ permalink raw reply [flat|nested] 6+ messages in thread* Re: Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818 2019-05-28 8:50 Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818 rey-coyrehourcq @ 2019-05-28 10:48 ` David Bremner 2019-05-28 12:45 ` sebastien rey-coyrehourcq 1 sibling, 0 replies; 6+ messages in thread From: David Bremner @ 2019-05-28 10:48 UTC (permalink / raw) To: rey-coyrehourcq, Notmuch Mail rey-coyrehourcq <sebastien.rey-coyrehourcq@univ-rouen.fr> writes: > Hi, > Using Ubuntu 18, i have a segfault after update and recompilation of notmuch at > commit 73cebe6e7233f59ba26d9f7c05265b7776795818 (HEAD -> master, origin/master, > origin/HEAD) Are you running 18.04 or 18.10? Travis is currently successfuly running the notmuch test suite in Ubuntu 18.04, but it involves supplying quite a few of the dependencies from a PPA. Does the notmuch test suite pass on your machine? (make test) - if yes, that suggests something unanticipated about your mail store. The GMime messages suggest it has something to do with the new support for gzipped messages. In this case a backtrace using gdb might help, as would checking for strange things like dangling symlinks. - if no, then could you please compare the versions of dependencies with those reported at https://api.travis-ci.org/v3/job/538163633/log.txt Search for "After this operation, 40.7 MB of additional disk space will be used." to skip some noise at the top. The version of GMime is particularly important. d ^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818 2019-05-28 8:50 Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818 rey-coyrehourcq 2019-05-28 10:48 ` David Bremner @ 2019-05-28 12:45 ` sebastien rey-coyrehourcq 2019-05-28 12:59 ` David Bremner 1 sibling, 1 reply; 6+ messages in thread From: sebastien rey-coyrehourcq @ 2019-05-28 12:45 UTC (permalink / raw) To: Notmuch Mail [-- Attachment #1: Type: text/plain, Size: 4025 bytes --] Hi, I use 18.4.2 LTS. I install the dependencies, compile and run the test which are all successfulls (expect the three expected failures). I have the same error when run notmuch new, the backtrace is : (gdb) backtrace #0 0x00007ffff6969410 in g_mime_stream_construct () at /usr/lib/x86_64-linux-gnu/libgmime-3.0.so.0 #1 0x00007ffff696d124 in g_mime_stream_fs_new_with_bounds () at /usr/lib/x86_64-linux-gnu/libgmime-3.0.so.0 #2 0x00007ffff7bc6f3f in g_mime_stream_gzfile_open (filename=<optimized out>) at util/gmime-extra.c:54 #3 0x00007ffff7bb0b51 in _notmuch_message_file_open_ctx (notmuch=notmuch@entry=0x5555557b67d0, ctx=ctx@entry=0x0, filename=filename@entry=0x5555557eceb0 "/home/reyman/Mail/unthinkingdepths/0_InfoLabos/.mbsyncstate") at lib/message-file.c:73 #4 0x00007ffff7bb0baa in _notmuch_message_file_open (notmuch=notmuch@entry=0x5555557b67d0, filename=filename@entry=0x5555557eceb0 "/home/reyman/Mail/unthinkingdepths/0_InfoLabos/.mbsyncstate") at lib/message-file.c:91 #5 0x00007ffff7bbf01b in notmuch_database_index_file(notmuch_database_t*, char const*, notmuch_indexopts_t*, notmuch_message_t**) (notmuch=notmuch@entry=0x5555557b67d0, filename=filename@entry=0x5555557eceb0 "/home/reyman/Mail/unthinkingdepths/0_InfoLabos/.mbsyncstate", indexopts=0x5555557b6760, message_ret=message_ret@entry=0x7fffffffcce8) at lib/add-message.cc:494 #6 0x0000555555563dad in add_file (state=0x7fffffffd0d0, filename=0x5555557eceb0 "/home/reyman/Mail/unthinkingdepths/0_InfoLabos/.mbsyncstate", notmuch=0x5555557b67d0) at notmuch-new.c:382 #7 0x0000555555563dad in add_files (notmuch=notmuch@entry=0x5555557b67d0, path=path@entry=0x5555557ed2e0 "/home/reyman/Mail/unthinkingdepths/0_InfoLabos", state=state@entry=0x7fffffffd0d0) at notmuch-new.c:720 #8 0x00005555555636b2 in add_files (notmuch=notmuch@entry=0x5555557b67d0, path=path@entry=0x5555557b5260 "/home/reyman/Mail/unthinkingdepths", state=state@entry=0x7fffffffd0d0) at notmuch-new.c:604 #9 0x00005555555636b2 in add_files (notmuch=0x5555557b67d0, path=path@entry=0x55555577c520 "/home/reyman/Mail", state=state@entry=0x7fffffffd0d0) at notmuch-new.c:604 #10 0x000055555556497d in notmuch_new_command (config=0x555555787170, argc=<optimized out>, argv=<optimized out>) at notmuch-new.c:1232 #11 0x000055555555d154 in main (argc=2, argv=0x7fffffffd8d8) at notmuch.c:510 Best regards, SR May 28, 2019 10:50:01 AM CEST rey-coyrehourcq <sebastien.rey-coyrehourcq@univ-rouen.fr> wrote: Hi, Using Ubuntu 18, i have a segfault after update and recompilation of notmuch at commit 73cebe6e7233f59ba26d9f7c05265b7776795818 (HEAD -> master, origin/master, origin/HEAD) Running : notmuch new (process:29765): GLib-GObject-WARNING **: 10:33:54.858: cannot register existing type 'GMimeStream' (process:29765): GLib-GObject-CRITICAL **: 10:33:54.859: g_type_register_static: assertion 'parent_type > 0' failed (process:29765): GLib-GObject-CRITICAL **: 10:33:54.859: g_object_new_with_properties: assertion 'G_TYPE_IS_OBJECT (object_type)' failed [1] 29765 segmentation fault (core dumped) notmuch new Using GDB : (gdb) run Starting program: /home/reyman/Binaire/notmuch new [Thread debugging using libthread_db enabled] Using host libthread_db library "/lib/x86_64-linux-gnu/libthread_db.so.1". (process:32147): GLib-GObject-WARNING **: 10:42:03.024: cannot register existing type 'GMimeStream' (process:32147): GLib-GObject-CRITICAL **: 10:42:03.024: g_type_register_static: assertion 'parent_type > 0' failed (process:32147): GLib-GObject-CRITICAL **: 10:42:03.024: g_object_new_with_properties: assertion 'G_TYPE_IS_OBJECT (object_type)' failed Program received signal SIGSEGV, Segmentation fault. 0x00007ffff6969410 in g_mime_stream_construct () from /usr/lib/x86_64-linux-gnu/libgmime-3.0.so.0 Sébastien Rey-Coyrehourcq Research Engineer UMR IDEES 02.35.14.69.30 {Stronger security for your email, follow EFF tutorial : https://ssd.eff.org/} [-- Attachment #2: Type: text/html, Size: 5251 bytes --] ^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818 2019-05-28 12:45 ` sebastien rey-coyrehourcq @ 2019-05-28 12:59 ` David Bremner 2019-05-28 14:02 ` rey-coyrehourcq 0 siblings, 1 reply; 6+ messages in thread From: David Bremner @ 2019-05-28 12:59 UTC (permalink / raw) To: sebastien rey-coyrehourcq, Notmuch Mail sebastien rey-coyrehourcq <sebastien.rey-coyrehourcq@univ-rouen.fr> writes: > (gdb) backtrace > #0 0x00007ffff6969410 in g_mime_stream_construct () at /usr/lib/x86_64-linux-gnu/libgmime-3.0.so.0 > #1 0x00007ffff696d124 in g_mime_stream_fs_new_with_bounds () at /usr/lib/x86_64-linux-gnu/libgmime-3.0.so.0 > #2 0x00007ffff7bc6f3f in g_mime_stream_gzfile_open (filename=<optimized out>) at util/gmime-extra.c:54 > #3 0x00007ffff7bb0b51 in _notmuch_message_file_open_ctx (notmuch=notmuch@entry=0x5555557b67d0, ctx=ctx@entry=0x0, filename=filename@entry=0x5555557eceb0 "/home/reyman/Mail/unthinkingdepths/0_InfoLabos/.mbsyncstate") at lib/message-file.c:73 1) What can you tell me about .mbsyncstate? Is it a dangling symlink? An empty file? very large? 2) what happens if you add .mbsyncstate to new.ignore with 'notmuch config'? ^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818 2019-05-28 12:59 ` David Bremner @ 2019-05-28 14:02 ` rey-coyrehourcq 2019-05-29 11:45 ` David Bremner 0 siblings, 1 reply; 6+ messages in thread From: rey-coyrehourcq @ 2019-05-28 14:02 UTC (permalink / raw) To: David Bremner, Notmuch Mail [-- Attachment #1.1: Type: text/plain, Size: 1280 bytes --] Finally found my problem, I install notmuch into custom dir, and the declared PATH point to an old binary in the wrong /bin folder. I works now. Sorry for that, and thanks David for your help. Le mardi 28 mai 2019 à 09:59 -0300, David Bremner a écrit : > sebastien rey-coyrehourcq <sebastien.rey-coyrehourcq@univ-rouen.fr>writes: > (gdb) backtrace#0 0x00007ffff6969410 in g_mime_stream_construct () at > /usr/lib/x86_64-linux-gnu/libgmime-3.0.so.0#1 0x00007ffff696d124 in > g_mime_stream_fs_new_with_bounds () at /usr/lib/x86_64-linux-gnu/libgmime- > 3.0.so.0#2 0x00007ffff7bc6f3f in g_mime_stream_gzfile_open > (filename=<optimized out>) at util/gmime-extra.c:54#3 0x00007ffff7bb0b51 in > _notmuch_message_file_open_ctx (notmuch=notmuch@entry=0x5555557b67d0, > ctx=ctx@entry=0x0, filename=filename@entry=0x5555557eceb0 > "/home/reyman/Mail/unthinkingdepths/0_InfoLabos/.mbsyncstate") at lib/message- > file.c:73 > 1) What can you tell me about .mbsyncstate? Is it a dangling symlink?An empty > file? very large? > 2) what happens if you add .mbsyncstate to new.ignore with 'notmuch config'? Sébastien Rey-Coyrehourcq Research Engineer UMR IDEES 02.35.14.69.30 {Stronger security for your email, follow EFF tutorial : https://ssd.eff.org/} [-- Attachment #1.2: Type: text/html, Size: 2003 bytes --] [-- Attachment #2: This is a digitally signed message part --] [-- Type: application/pgp-signature, Size: 833 bytes --] ^ permalink raw reply [flat|nested] 6+ messages in thread
* Re: Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818 2019-05-28 14:02 ` rey-coyrehourcq @ 2019-05-29 11:45 ` David Bremner 0 siblings, 0 replies; 6+ messages in thread From: David Bremner @ 2019-05-29 11:45 UTC (permalink / raw) To: rey-coyrehourcq, Notmuch Mail rey-coyrehourcq <sebastien.rey-coyrehourcq@univ-rouen.fr> writes: > Finally found my problem, > I install notmuch into custom dir, and the declared PATH point to an old binary > in the wrong /bin folder. > I works now. > Sorry for that, and thanks David for your help. Great, glad it's working. And thanks for taking the time to make a good bug report. d ^ permalink raw reply [flat|nested] 6+ messages in thread
end of thread, other threads:[~2019-05-29 11:45 UTC | newest] Thread overview: 6+ messages (download: mbox.gz follow: Atom feed -- links below jump to the message on this page -- 2019-05-28 8:50 Segfault on notmuch compiled using commit 73cebe6e7233f59ba26d9f7c05265b7776795818 rey-coyrehourcq 2019-05-28 10:48 ` David Bremner 2019-05-28 12:45 ` sebastien rey-coyrehourcq 2019-05-28 12:59 ` David Bremner 2019-05-28 14:02 ` rey-coyrehourcq 2019-05-29 11:45 ` David Bremner
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