From b88c44394c1a6e2e9a5932ac2a3a9b431408c742 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 12 Jun 2015 15:46:40 +0200 Subject: [PATCH 1/2] gnu: Add python2-pysnptools. * gnu/packages/python.scm (python2-pysnptools): New variable. --- gnu/packages/python.scm | 30 ++++++++++++++++++++++++++++++ 1 file changed, 30 insertions(+) diff --git a/gnu/packages/python.scm b/gnu/packages/python.scm index d503c78..7958a5f 100644 --- a/gnu/packages/python.scm +++ b/gnu/packages/python.scm @@ -2598,6 +2598,36 @@ toolkits.") (package-propagated-inputs matplotlib)))))))) +(define-public python2-pysnptools + (package + (name "python2-pysnptools") + (version "0.2.13") + (source + (origin + (method url-fetch) + (uri (string-append + "https://pypi.python.org/packages/source/p/pysnptools" + "/pysnptools-" version ".zip")) + (sha256 + (base32 + "1rzf5qvwfvd2pp84b14pb2gdvxdk5avnj7rb41ac8gndpkr9g6ib")))) + (build-system python-build-system) + (arguments + `(#:python ,python-2)) ; only Python 2.7 is supported + (propagated-inputs + `(("python2-numpy" ,python2-numpy) + ("python2-scipy" ,python2-scipy) + ("python2-pandas" ,python2-pandas) + ("python2-cython" ,python2-cython))) + (native-inputs + `(("unzip" ,unzip) + ("python2-setuptools" ,python2-setuptools))) + (home-page "http://research.microsoft.com/en-us/um/redmond/projects/mscompbio/") + (synopsis "Library for reading and manipulating genetic data") + (description + "PySnpTools is a library for reading and manipulating genetic data.") + (license asl2.0))) + (define-public python-scipy (package (name "python-scipy") -- 2.1.0