From mboxrd@z Thu Jan 1 00:00:00 1970 From: Ricardo Wurmus Subject: [PATCH] Add perl-czplib. Date: Thu, 27 Aug 2015 14:06:00 +0200 Message-ID: Mime-Version: 1.0 Content-Type: text/x-patch Return-path: Received: from eggs.gnu.org ([2001:4830:134:3::10]:45541) by lists.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1ZUvwa-0005YR-46 for guix-devel@gnu.org; Thu, 27 Aug 2015 08:06:16 -0400 Received: from Debian-exim by eggs.gnu.org with spam-scanned (Exim 4.71) (envelope-from ) id 1ZUvwW-0008FY-0K for guix-devel@gnu.org; Thu, 27 Aug 2015 08:06:12 -0400 Received: from venus.bbbm.mdc-berlin.de ([141.80.25.30]:42917) by eggs.gnu.org with esmtp (Exim 4.71) (envelope-from ) id 1ZUvwV-0008Eq-JU for guix-devel@gnu.org; Thu, 27 Aug 2015 08:06:07 -0400 Received: from localhost (localhost [127.0.0.1]) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTP id 001AF380AB7 for ; Thu, 27 Aug 2015 14:06:06 +0200 (CEST) Received: from venus.bbbm.mdc-berlin.de ([127.0.0.1]) by localhost (venus.bbbm.mdc-berlin.de [127.0.0.1]) (amavisd-new, port 10024) with ESMTP id 4_zsH6b0jSZM for ; Thu, 27 Aug 2015 14:06:00 +0200 (CEST) Received: from HTCAONE.mdc-berlin.net (mab.citx.mdc-berlin.de [141.80.36.102]) by venus.bbbm.mdc-berlin.de (Postfix) with ESMTP for ; Thu, 27 Aug 2015 14:06:00 +0200 (CEST) Content-Disposition: inline; filename="0001-gnu-Add-perl-czplib.patch" List-Id: "Development of GNU Guix and the GNU System distribution." List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org Sender: guix-devel-bounces+gcggd-guix-devel=m.gmane.org@gnu.org To: Guix-devel >From 3d71c025deead1dbba365e09e6b2a1804b97dac1 Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Thu, 27 Aug 2015 14:05:10 +0200 Subject: [PATCH] gnu: Add perl-czplib. * gnu/packages/perl.scm (perl-czplib): New variable. --- gnu/packages/perl.scm | 40 ++++++++++++++++++++++++++++++++++++++++ 1 file changed, 40 insertions(+) diff --git a/gnu/packages/perl.scm b/gnu/packages/perl.scm index f784798..c528516 100644 --- a/gnu/packages/perl.scm +++ b/gnu/packages/perl.scm @@ -1051,6 +1051,46 @@ contained in Appendix A of FIPS Publication 181, \"Standard for Automated Password Generator\".") (license (package-license perl)))) +(define-public perl-czplib + (package + (name "perl-czplib") + (version "1.0.5") + (source + (origin + (method url-fetch) + (uri (string-append "mirror://sourceforge/czplib/czplib.v" + version ".tgz")) + (sha256 + (base32 + "12kln8l5h406r1ss6zbazgcshmys9nvabkrhvk2zwrrgl1saq1kf")) + (modules '((guix build utils))) + (snippet + '(begin + ;; Remove .git directory + (delete-file-recursively ".git") + #t)))) + (build-system perl-build-system) + (arguments + `(#:phases + (modify-phases %standard-phases + (delete 'configure) + (delete 'build) + (replace + 'install + (lambda* (#:key outputs #:allow-other-keys) + (copy-recursively "." + (string-append (assoc-ref outputs "out") + "/plib/perl5/site_perl/" + ,(package-version perl) + "/czplib/")) + #t))))) + (home-page "http://sourceforge.net/projects/czplib/") + (synopsis "Library for genomic analysis") + (description "Chaolin Zhang's Perl Library (czplib) contains assorted +functions and data structures for processing and analysing genomic and +bioinformatics data.") + (license gpl3+))) + (define-public perl-data-dump (package (name "perl-data-dump") -- 2.1.0