From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
To: guix-devel <guix-devel@gnu.org>
Subject: [PATCH] Add python-statsmodels.
Date: Fri, 16 Oct 2015 15:48:29 +0200 [thread overview]
Message-ID: <idj8u72zzyq.fsf@bimsb-sys02.mdc-berlin.net> (raw)
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Hi Guix,
the attached patch adds python{,2}-statsmodels to statistics.scm. Note
that this depends on my previous patch adding patsy to the same module.
~~ Ricardo
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From 33ddc045065722a0bac9b28ad909e838b169d7cb Mon Sep 17 00:00:00 2001
From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
Date: Tue, 13 Oct 2015 13:28:58 +0200
Subject: [PATCH 1/2] gnu: Add python-statsmodels.
* gnu/packages/statistics.scm (python-statsmodels, python2-statsmodels):
New variables.
---
gnu/packages/statistics.scm | 64 +++++++++++++++++++++++++++++++++++++++++++++
1 file changed, 64 insertions(+)
diff --git a/gnu/packages/statistics.scm b/gnu/packages/statistics.scm
index 1492094..0c0464c 100644
--- a/gnu/packages/statistics.scm
+++ b/gnu/packages/statistics.scm
@@ -989,3 +989,67 @@ building design matrices.")
,@(alist-delete "python-numpy"
(alist-delete "python-scipy"
(package-propagated-inputs patsy))))))))
+
+(define-public python-statsmodels
+ (package
+ (name "python-statsmodels")
+ (version "0.6.1")
+ (source
+ (origin
+ (method url-fetch)
+ (uri (string-append "https://pypi.python.org/packages/source/"
+ "s/statsmodels/statsmodels-" version ".tar.gz"))
+ (sha256
+ (base32
+ "0xn67sqr0cc1lmlhzm71352hrb4hw7g318p5ff5q97pc98vl8kmy"))))
+ (build-system python-build-system)
+ (arguments
+ `(#:phases
+ (modify-phases %standard-phases
+ ;; tests must be run after installation
+ (delete 'check)
+ (add-after 'unpack 'set-matplotlib-backend-to-agg
+ (lambda _
+ ;; Set the matplotlib backend to Agg to avoid problems using the
+ ;; GTK backend without a display.
+ (substitute* (find-files "statsmodels/graphics/tests" "\\.py")
+ (("import matplotlib\\.pyplot as plt" line)
+ (string-append "import matplotlib;matplotlib.use('Agg');"
+ line)))
+ #t))
+ (add-after 'install 'check
+ (lambda _
+ (with-directory-excursion "/tmp"
+ (zero? (system* "nosetests"
+ "--stop"
+ "-v" "statsmodels"))))))))
+ (propagated-inputs
+ `(("python-numpy" ,python-numpy)
+ ("python-scipy" ,python-scipy)
+ ("python-pandas" ,python-pandas)
+ ("python-patsy" ,python-patsy)
+ ("python-matplotlib" ,python-matplotlib)))
+ (native-inputs
+ `(("python-cython" ,python-cython)
+ ("python-nose" ,python-nose)
+ ("python-sphinx" ,python-sphinx)))
+ (home-page "http://statsmodels.sourceforge.net/")
+ (synopsis "Statistical modeling and econometrics in Python")
+ (description
+ "Statsmodels is a Python package that provides a complement to scipy for
+statistical computations including descriptive statistics and estimation and
+inference for statistical models.")
+ (license license:bsd-3)))
+
+(define-public python2-statsmodels
+ (let ((stats (package-with-python2 python-statsmodels)))
+ (package (inherit stats)
+ (propagated-inputs
+ `(("python2-numpy" ,python2-numpy)
+ ("python2-scipy" ,python2-scipy)
+ ("python2-pandas" ,python2-pandas)
+ ("python2-patsy" ,python2-patsy)
+ ("python2-matplotlib" ,python2-matplotlib)))
+ (native-inputs
+ `(("python2-setuptools" ,python2-setuptools)
+ ,@(package-native-inputs stats))))))
--
2.1.0
next reply other threads:[~2015-10-16 13:48 UTC|newest]
Thread overview: 3+ messages / expand[flat|nested] mbox.gz Atom feed top
2015-10-16 13:48 Ricardo Wurmus [this message]
2015-10-19 15:47 ` [PATCH] Add python-statsmodels Ludovic Courtès
-- strict thread matches above, loose matches on Subject: below --
2015-10-19 16:15 Federico Beffa
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