all messages for Guix-related lists mirrored at yhetil.org
 help / color / mirror / code / Atom feed
From: Ricardo Wurmus <ricardo.wurmus@mdc-berlin.de>
To: guix-devel <guix-devel@gnu.org>
Subject: Re: [PATCH] Add preseq.
Date: Wed, 1 Jul 2015 15:30:56 +0200	[thread overview]
Message-ID: <idj4mlohunj.fsf@bimsb-sys02.mdc-berlin.net> (raw)
In-Reply-To: <idj8ub7kjl1.fsf@bimsb-sys02.mdc-berlin.net>

> Attached is a new version that includes support for BAM files, but
> without using the bundled version of samtools.  Two patches were
> necessary that I have submitted upstream.
>
> I'm still testing this with a user, and I'm waiting for upstream to
> comment on the patches, so I'm not in a hurry to push this.

Upstream merged the patches, but there's no new release yet.  See
https://github.com/smithlabcode/preseq/pull/15.

It seems to work fine.

~~ Ricardo

      parent reply	other threads:[~2015-07-01 13:31 UTC|newest]

Thread overview: 12+ messages / expand[flat|nested]  mbox.gz  Atom feed  top
2015-06-23 11:02 [PATCH] Add preseq Ricardo Wurmus
2015-06-25 13:23 ` Ricardo Wurmus
2015-07-01 13:30   ` Ludovic Courtès
2015-07-01 13:33     ` Ricardo Wurmus
2015-07-01 15:00       ` Ludovic Courtès
2015-07-07 12:45         ` Ricardo Wurmus
2015-07-08 12:59           ` Ludovic Courtès
2015-07-08 22:37             ` Mark H Weaver
2015-07-09 10:16               ` Ricardo Wurmus
2015-07-09 15:55                 ` Mark H Weaver
2015-07-10  7:10                   ` Ricardo Wurmus
2015-07-01 13:30   ` Ricardo Wurmus [this message]

Reply instructions:

You may reply publicly to this message via plain-text email
using any one of the following methods:

* Save the following mbox file, import it into your mail client,
  and reply-to-all from there: mbox

  Avoid top-posting and favor interleaved quoting:
  https://en.wikipedia.org/wiki/Posting_style#Interleaved_style

* Reply using the --to, --cc, and --in-reply-to
  switches of git-send-email(1):

  git send-email \
    --in-reply-to=idj4mlohunj.fsf@bimsb-sys02.mdc-berlin.net \
    --to=ricardo.wurmus@mdc-berlin.de \
    --cc=guix-devel@gnu.org \
    /path/to/YOUR_REPLY

  https://kernel.org/pub/software/scm/git/docs/git-send-email.html

* If your mail client supports setting the In-Reply-To header
  via mailto: links, try the mailto: link
Be sure your reply has a Subject: header at the top and a blank line before the message body.
Code repositories for project(s) associated with this external index

	https://git.savannah.gnu.org/cgit/guix.git

This is an external index of several public inboxes,
see mirroring instructions on how to clone and mirror
all data and code used by this external index.