From fb79596b106081d8fabff9b0e3d5a2869057a8bd Mon Sep 17 00:00:00 2001 From: Ricardo Wurmus Date: Fri, 18 Dec 2015 14:06:09 +0100 Subject: [PATCH 08/17] gnu: Add Biobase. * gnu/packages/bioinformatics.scm (r-biobase): New variable. --- gnu/packages/bioinformatics.scm | 23 +++++++++++++++++++++++ 1 file changed, 23 insertions(+) diff --git a/gnu/packages/bioinformatics.scm b/gnu/packages/bioinformatics.scm index 142b29a..263bcc0 100644 --- a/gnu/packages/bioinformatics.scm +++ b/gnu/packages/bioinformatics.scm @@ -3495,6 +3495,29 @@ GenomicRanges package defines general purpose containers for storing and manipulating genomic intervals and variables defined along a genome.") (license license:artistic2.0))) +(define-public r-biobase + (package + (name "r-biobase") + (version "2.30.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "Biobase" version)) + (sha256 + (base32 + "1qasjpq3kw8h7qw8cin3bjvv1256hqr1mm24fq3v0ymxzlb66szi")))) + (properties + `((upstream-name . "Biobase") + (r-repository . bioconductor))) + (build-system r-build-system) + (propagated-inputs + `(("r-biocgenerics" ,r-biocgenerics))) + (home-page "http://bioconductor.org/packages/Biobase") + (synopsis "Base functions for Bioconductor") + (description + "This package provides functions that are needed by many other packages +on Bioconductor or which replace R functions.") + (license license:artistic2.0))) + (define-public r-qtl (package (name "r-qtl") -- 2.1.0