From mboxrd@z Thu Jan 1 00:00:00 1970 Return-Path: Received: from mp11.migadu.com ([2001:41d0:403:478a::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by ms9.migadu.com with LMTPS id iGH4EyOnAGXmKwEA9RJhRA:P1 (envelope-from ) for ; Tue, 12 Sep 2023 20:00:03 +0200 Received: from aspmx1.migadu.com ([2001:41d0:403:478a::]) (using TLSv1.3 with cipher TLS_AES_256_GCM_SHA384 (256/256 bits)) by mp11.migadu.com with LMTPS id iGH4EyOnAGXmKwEA9RJhRA (envelope-from ) for ; Tue, 12 Sep 2023 20:00:03 +0200 Received: from lists.gnu.org (lists.gnu.org [209.51.188.17]) (using TLSv1.2 with cipher ECDHE-RSA-AES256-GCM-SHA384 (256/256 bits)) (No client certificate requested) by aspmx1.migadu.com (Postfix) with ESMTPS id 7261936184 for ; Tue, 12 Sep 2023 17:15:18 +0200 (CEST) Authentication-Results: aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=DTqch9dc; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" ARC-Message-Signature: i=1; a=rsa-sha256; c=relaxed/relaxed; d=yhetil.org; s=key1; t=1694531719; h=from:from:sender:sender:reply-to:subject:subject:date:date: message-id:message-id:to:to:cc:cc:mime-version:mime-version: content-type:content-type: content-transfer-encoding:content-transfer-encoding:resent-cc: resent-from:resent-sender:resent-message-id:in-reply-to:in-reply-to: references:references:list-id:list-help:list-unsubscribe: list-subscribe:list-post:dkim-signature; bh=rE5NZT88sUAwEC4XEQiKiXOLp1U48fDcNH6ttQIlG3I=; b=bzfmZVj8jmPG0haH0hyKCl24OWv7Zm7l1OLZpaF0V8/8otcUsfc/pCkV/6SDx7KArCTlIq X1qvx4jnDh4PM3a3ee4GYjkDxg8fBWTEtqjp03Shxu0xEY3vHBeM/IiyrbaWs4/4GaEKEZ A4jqYPI5X7Xhl+gAOYhtU4w4QgD0yi/fpCWtRpMVwu3ctB6jDe37wzy6/FcTHPk1kCLG/b jUEdWhxgEZy0DiEApV4AX67n8FiaQe8Dj4lhtF9jqvlen7vjGTZfccCueX99sdM3+HEMFK WbaOZRVk8vAPrV/JgSBTcq/Twcw+2oo5e6mjcdCV2G0xJSzv91Gx1A//PXlvAw== ARC-Seal: i=1; s=key1; d=yhetil.org; t=1694531719; a=rsa-sha256; cv=none; b=q8SLAKJWoEPzOa72O2Jks1dKmkleT4p2q3oTZPelAQinMrS3bKAJT8ADAIA7mB1M1IwFvN nXSj/kXRVQ2W2OeUcMNnRIoKXgIsge0KNA2CQ6gK6qHbMkznWCTqJqwuZlGZjmhjpRzasB b+lLXuGdvDVLiot7XvgmAz0M5YG28JlBsX2WFgGw373YOpqKgv2+qFydk4IGcL/055Kcd1 uKqbZ3Ny4LIpGsOfZKcnjIAUo4gNDC8cedwnT4zlpHMYAI0VCp09AH+lT0tjbMH2ZYFAWh ryQL+ZjG2OAX2SV5W112AbSaeNlCvYPiOzQiXMeAtudgMh+836W0ZjFeclB06w== ARC-Authentication-Results: i=1; aspmx1.migadu.com; dkim=fail ("headers rsa verify failed") header.d=mdc-berlin.de header.s=mdc header.b=DTqch9dc; dmarc=fail reason="SPF not aligned (relaxed)" header.from=mdc-berlin.de (policy=none); spf=pass (aspmx1.migadu.com: domain of "guix-patches-bounces+larch=yhetil.org@gnu.org" designates 209.51.188.17 as permitted sender) smtp.mailfrom="guix-patches-bounces+larch=yhetil.org@gnu.org" Received: from localhost ([::1] helo=lists1p.gnu.org) by lists.gnu.org with esmtp (Exim 4.90_1) (envelope-from ) id 1qg56R-0006mz-3E; Tue, 12 Sep 2023 11:14:59 -0400 Received: from eggs.gnu.org ([2001:470:142:3::10]) by lists.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_256_GCM_SHA384:256) (Exim 4.90_1) (envelope-from ) id 1qg56P-0006mq-7B for guix-patches@gnu.org; Tue, 12 Sep 2023 11:14:57 -0400 Received: from debbugs.gnu.org ([2001:470:142:5::43]) by eggs.gnu.org with esmtps (TLS1.2:ECDHE_RSA_AES_128_GCM_SHA256:128) (Exim 4.90_1) (envelope-from ) id 1qg56O-0001FH-VA for guix-patches@gnu.org; Tue, 12 Sep 2023 11:14:56 -0400 Received: from Debian-debbugs by debbugs.gnu.org with local (Exim 4.84_2) (envelope-from ) id 1qg56T-00032t-Kc for guix-patches@gnu.org; Tue, 12 Sep 2023 11:15:01 -0400 X-Loop: help-debbugs@gnu.org Subject: [bug#65707] [PATCH] gnu: Add r-interactivedisplay. References: <8b873349673578098691476c6e023579ea78af96.1693691804.git.navid.afkhami@mdc-berlin.de> In-Reply-To: <8b873349673578098691476c6e023579ea78af96.1693691804.git.navid.afkhami@mdc-berlin.de> Resent-From: Navid Afkhami Original-Sender: "Debbugs-submit" Resent-CC: guix-patches@gnu.org Resent-Date: Tue, 12 Sep 2023 15:15:01 +0000 Resent-Message-ID: Resent-Sender: help-debbugs@gnu.org X-GNU-PR-Message: followup 65707 X-GNU-PR-Package: guix-patches X-GNU-PR-Keywords: patch To: <65707@debbugs.gnu.org> Cc: Navid Afkhami Received: via spool by 65707-submit@debbugs.gnu.org id=B65707.169453168311663 (code B ref 65707); Tue, 12 Sep 2023 15:15:01 +0000 Received: (at 65707) by debbugs.gnu.org; 12 Sep 2023 15:14:43 +0000 Received: from localhost ([127.0.0.1]:59807 helo=debbugs.gnu.org) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qg56A-000323-J2 for submit@debbugs.gnu.org; Tue, 12 Sep 2023 11:14:42 -0400 Received: from a2062.mx.srv.dfn.de ([194.95.232.172]:45021) by debbugs.gnu.org with esmtp (Exim 4.84_2) (envelope-from ) id 1qg567-00031n-Di for 65707@debbugs.gnu.org; Tue, 12 Sep 2023 11:14:41 -0400 DKIM-Signature: v=1; a=rsa-sha256; c=relaxed/simple; d=mdc-berlin.de; h= content-type:content-type:content-transfer-encoding:mime-version :x-mailer:message-id:date:date:subject:subject:from:from :received; s=mdc; t=1694531668; x=1696346069; bh=YZkS0mdLcGSvP4U 6WaUc0bE1cV3+wflXuwS0HAwU+zA=; b=DTqch9dc7/2TU53z6VPEHs9J4iteIYs 8Oz6USqISKbtNvxZNRmfxEy3C/Zwc99nj4LaTzlMzmNdUO29YHCSnimQPItKlnGP ypsGvMdtbfBX6x+BGo0tZv0y8kTBusL3d89oWA9QZpn3SzsK3aTagf2Jmd+zKWTo wzGjgOA5bE2M= Received: from SW-IT-P-EX2.mdc-berlin.net (mgw2.mdc-berlin.de [141.80.113.60]) by a2062.mx.srv.dfn.de (Postfix) with ESMTPS id C9603A00CF for <65707@debbugs.gnu.org>; Tue, 12 Sep 2023 17:14:28 +0200 (CEST) Received: from localhost (141.80.218.27) by SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) with Microsoft SMTP Server (version=TLS1_2, cipher=TLS_ECDHE_RSA_WITH_AES_256_GCM_SHA384) id 15.1.2507.32; Tue, 12 Sep 2023 17:14:28 +0200 From: Navid Afkhami Date: Tue, 12 Sep 2023 15:14:22 +0000 Message-ID: X-Mailer: git-send-email 2.34.1 MIME-Version: 1.0 Content-Transfer-Encoding: 8bit Content-Type: text/plain X-Originating-IP: [141.80.218.27] X-ClientProxiedBy: SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) To SW-IT-P-EX2.mdc-berlin.net (141.80.113.60) X-TM-AS-Product-Ver: SMEX-14.0.0.3092-9.0.1002-27872.000 X-TM-AS-Result: No-10--3.545400-5.000000 X-TMASE-MatchedRID: 54gb2yeIOXT/R1NSMc2qCU7nLUqYrlslFIuBIWrdOeOjEIt+uIPPOAbo TDS3zulAcjTcMkuJPYmDs24hteATn5DVJcLgl1Rz74lOop8Led8XjfR3d0weRnibY+6n81PkycO hvTXTlouSkIUZyUQUJ7VijUdnqQBWgljF8fKL2gni8zVgXoAltsIJ+4gwXrEtwrbXMGDYqV+5V9 z3vqk3KtBW5IvyYMohwXERITdJMgcwGjHNAX2s+7X+hZ8houRmkpyP4pcQZqNyAsM2YECdRKCIU XdAk/dDCQ8PfqY4Q9X57xNlE5mpMMbG0bMSRYDWFhnoKW4f7Mf1c8RJIeS1QFmKmfpzNHMN X-TM-AS-User-Approved-Sender: Yes X-TM-AS-User-Blocked-Sender: No X-TMASE-Result: 10--3.545400-5.000000 X-TMASE-Version: SMEX-14.0.0.3092-9.0.1002-27872.000 X-TM-SNTS-SMTP: CC7223343391C975D485E2D7CC11223292CCEFFAA1C94841F783365248DC25E62000:F X-BeenThere: debbugs-submit@debbugs.gnu.org X-Mailman-Version: 2.1.18 Precedence: list X-BeenThere: guix-patches@gnu.org List-Id: List-Unsubscribe: , List-Archive: List-Post: List-Help: List-Subscribe: , Errors-To: guix-patches-bounces+larch=yhetil.org@gnu.org Sender: guix-patches-bounces+larch=yhetil.org@gnu.org X-Migadu-Flow: FLOW_IN X-Migadu-Country: US X-Migadu-Spam-Score: 6.82 X-Spam-Score: 6.82 X-Migadu-Queue-Id: 7261936184 X-Migadu-Scanner: mx0.migadu.com X-TUID: JNSAOHM26gPW * gnu/packages/bioconductor.scm (r-interactivedisplay): New variable. --- gnu/packages/bioconductor.scm | 44 +++++++++++++++++++++++++++++++++++ 1 file changed, 44 insertions(+) diff --git a/gnu/packages/bioconductor.scm b/gnu/packages/bioconductor.scm index c913232680..9c03366f8b 100644 --- a/gnu/packages/bioconductor.scm +++ b/gnu/packages/bioconductor.scm @@ -7734,6 +7734,50 @@ (define-public r-impute microarray data, using nearest neighbor averaging.") (license license:gpl2+))) +(define-public r-interactivedisplay + (package + (name "r-interactivedisplay") + (version "1.38.0") + (source (origin + (method url-fetch) + (uri (bioconductor-uri "interactiveDisplay" version)) + (sha256 + (base32 + "1y9fdnpz1bagrwhyj8jikp2q5fd9y74j48l5z7f0s88v88sa7szl")))) + (properties `((upstream-name . "interactiveDisplay"))) + (build-system r-build-system) + (propagated-inputs (list r-annotationdbi + r-biocgenerics + r-biocmanager + r-category + r-dt + r-ggplot2 + r-gridsvg + r-interactivedisplaybase + r-plyr + r-rcolorbrewer + r-reshape2 + r-shiny + r-zlibbioc + r-xml)) + (native-inputs `(("esbuild" ,esbuild) + ("r-knitr" ,r-knitr) +("js-jquery-1.9.1" +,(origin + (method url-fetch) + (uri "https://code.jquery.com/jquery-1.9.1.js") + (sha256 + (base32 + "0h4dk67yc9d0kadqxb6b33585f3x3559p6qmp70l00qwq030vn3v")))))) + (home-page "https://bioconductor.org/packages/interactiveDisplay") + (synopsis + "Package for enabling powerful shiny web displays of Bioconductor objects") + (description + "This package offers interactive Shiny displays for Bioconductor objects. +In addition, this package empower users to develop engaging visualizations +and interfaces for working with Bioconductor data.") + (license license:artistic2.0))) + (define-public r-interactivedisplaybase (package (name "r-interactivedisplaybase") base-commit: 45af7b89239d4bbdc145a5c9cc03356f31d5a20e -- 2.34.1